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PR01034

Identifier
RIBOSOMALS12  [View Relations]  [View Alignment]  
Accession
PR01034
No. of Motifs
6
Creation Date
27-NOV-1998  (UPDATE 10-JUN-1999)
Title
Ribosomal protein S12 signature
Database References

PROSITE; PS00055 RIBOSOMAL_S12
PFAM; PF00164 Ribosomal_S12
INTERPRO; IPR000230
Literature References
1. KURLAND, C.G., JORGENSEN, F., RICHTER, A., EHRENBERG, M., BILGIN, N. 
AND ROJAS, A.-M.
IN THE RIBOSOME: STRUCTURE, FUNCTION AND EVOLUTION (ED. W.E.HILL ET AL.) 
PP.513-526 (AMERICAN SOCIETY FOR MICROBIOLOGY, WASHINGTON DC).
 
2. MUELLER, F. AND BRIMACOMBE, R.
A new model for the three-dimensional folding of Escherichia coli
16S ribosomal RNA. II. The RNA-protein interaction data.
J.MOL.BIOL. 271(4) 545-565 (1997).
 
3. OTAKA, E., SUZUKI, K. AND HASHIMOTO, T.
Examination of protein sequence homologies. VII. The complementary molecular
coevolution of ribosomal proteins equivalent to Escherichia coli L7/L12 and 
L10.
PROTEIN SEQ.DATA ANAL. 3 11-19 (1990).

Documentation
Ribosomes are ribonucleoprotein particles that are the site of protein
synthesis. The structure of the ribosome is well conserved across the
prokaryotic and eukaryotic lineages, reflecting the early origin of their
essential function. They comprise two subunits, which can dissociate on 
heating. In prokaryotes, the small subunit contains a single large RNA 
moeity denoted, according to its sedimentation coefficient, 16S rRNA, and 21 
different ribosomal proteins, designated S1-S21. Eukaryotic small ribosomal
subunits contain 33 proteins, many of which are similar to those found
in prokaryotes. 
 
There are two major tRNA binding sites on the ribosome, termed the A site, 
where incoming aminoacyl-tRNA is bound, and the P site (for peptidyl tRNA), 
where new peptide bonds are formed. The ribosomal proteins catalyse ribosome 
assembly and stabilise the rRNA, tuning the structure of the ribosome for 
optimal function [1]. Evidence suggests that, in prokaryotes, the peptidyl
transferase reaction is performed by the large subunit 23S rRNA, whereas
proteins probably have a greater role in eukaryotic ribosomes. Most of the
proteins lie close to, or on the surface of, the 30S subunit, arranged
peripherally around the rRNA [2]. The small subunit ribosomal proteins can
be categorised as primary binding proteins, which bind directly and
independently to 16S rRNA; secondary binding proteins, which display no
specific affinity for 16S rRNA, but its assembly is contingent upon the
presence of one or more primary binding proteins; and tertiary binding
proteins, which require the presence of one or more secondary binding
proteins and sometimes other tertiary binding proteins.
 
The small ribosomal subunit protein S12 contains 130-150 amino acids. In 
E.coli, S12 is known to be involved in the translation initiation step.
S12 belongs to a family of ribosomal proteins [3] that includes: eubacterial
S12; archaebacterial S12; algal and plant chloroplast S12; cyanelle S12;
protozoa and plant mitochondrial S12; yeast S28; Drosophila mitochondrial
protein tko (Technical KnockOut); and mammalian S23.
 
RIBOSOMALS12 is a 6-element fingerprint that provides a signature for
ribosomal S12 proteins. The fingerprint was derived from an initial
alignment of 11 sequences: the motifs were drawn from conserved regions
spanning virtually the full alignment length - motif 2 includes the central
region encoded by PROSITE pattern RIBOSOMAL_S12 (PS00055). Two iterations 
on OWL30.2 were required to reach convergence, at which point a true set 
comprising 78 sequences was identified. Several partial matches were also 
found, all of which are homologues that fail to make significant matches
with one or more motifs, and many of which are fragments.
 
An update on SPTR37_9f identified a true set of 72 sequences, and 5
partial matches.
Summary Information
  72 codes involving  6 elements
0 codes involving 5 elements
3 codes involving 4 elements
2 codes involving 3 elements
0 codes involving 2 elements
Composite Feature Index
6727272727272
5000000
4233310
3121200
2000000
123456
True Positives
O14182        O21239        O24084        O47435        
O48370 O70089 O84446 P93335
P97222 Q25818 RR12_ASTLO RR12_CHLRE
RR12_CHLVU RR12_CUSEU RR12_CYAPA RR12_EPIVI
RR12_EUGGR RR12_GUITH RR12_HORVU RR12_MAIZE
RR12_MARPO RR12_ODOSI RR12_ORYSA RR12_PINTH
RR12_PORPU RR12_SOYBN RR12_SPIMX RR12_TOBAC
RS12_ANANI RS12_BACST RS12_BACSU RS12_BORBU
RS12_ECOLI RS12_ERWAM RS12_HAEIN RS12_HELPY
RS12_LEPBI RS12_MICLU RS12_MYCBO RS12_MYCGE
RS12_MYCIT RS12_MYCLE RS12_MYCPN RS12_MYCSM
RS12_MYCTU RS12_RICPR RS12_SPIPL RS12_STAAU
RS12_STRPN RS12_SYNY3 RS12_THETH RS12_THICU
RS12_TREPA RT12_ALLCE RT12_ARATH RT12_BRANA
RT12_CHLS6 RT12_CHOCR RT12_HELAN RT12_MAGSO
RT12_MAIZE RT12_MARPO RT12_NICSY RT12_OENHO
RT12_ORYSA RT12_PANGI RT12_PARTE RT12_PETHY
RT12_PINSY RT12_PROWI RT12_RAPSA YN8K_YEAST
True Positive Partials
Codes involving 4 elements
RT12_ACACA RT12_DROME RT12_MOUSE
Codes involving 3 elements
Q23886 RT12_HUMAN
Sequence Titles
O14182      PUTATIVE 40S MITOCHONDRIAL RIBOSOMAL PROTEIN C4F8.06 - SCHIZOSACCHAROMYCES POMBE (FISSION YEAST). 
O21239 RIBOSOMAL PROTEIN S12 - RECLINOMONAS AMERICANA.
O24084 RIBOSOMAL PROTEIN S12 - BRASSICA NAPUS (RAPE).
O47435 RIBOSOMAL PROTEIN S12 - LUPINUS ALBUS (WHITE LUPINE).
O48370 RIBOSOMAL PROTEIN S12 - LUPINUS ANGUSTIFOLIUS (NARROW-LEAVED BLUE LUPINE), LUPINUS LUTEUS (YELLOW LUPINE), AND LUPINUS MUTABILIS.
O70089 RIBOSOMAL PROTEIN S12 - AQUIFEX AEOLICUS.
O84446 S12 RIBOSOMAL PROTEIN - CHLAMYDIA TRACHOMATIS.
P93335 MITOCHONDRIAL RPS12 - SORGHUM BICOLOR MILO (SORGHUM).
P97222 RIBOSOMAL PROTEIN S12 - STREPTOMYCES LIVIDANS, AND STREPTOMYCES ROSEOSPORUS.
Q25818 COMPLETE GENE MAP OF PLASTID-LIKE DNA (IR-B) - PLASMODIUM FALCIPARUM.
RR12_ASTLO CHLOROPLAST 30S RIBOSOMAL PROTEIN S12 - ASTASIA LONGA (EUGLENOPHYCEAN ALGA).
RR12_CHLRE CHLOROPLAST 30S RIBOSOMAL PROTEIN S12 - CHLAMYDOMONAS REINHARDTII.
RR12_CHLVU CHLOROPLAST 30S RIBOSOMAL PROTEIN S12 - CHLORELLA VULGARIS.
RR12_CUSEU CHLOROPLAST 30S RIBOSOMAL PROTEIN S12 - CUSCUTA EUROPAEA (DODDER).
RR12_CYAPA CYANELLE 30S RIBOSOMAL PROTEIN S12 - CYANOPHORA PARADOXA.
RR12_EPIVI CHLOROPLAST 30S RIBOSOMAL PROTEIN S12 - EPIFAGUS VIRGINIANA (BEECHDROPS).
RR12_EUGGR CHLOROPLAST 30S RIBOSOMAL PROTEIN S12 - EUGLENA GRACILIS.
RR12_GUITH CHLOROPLAST 30S RIBOSOMAL PROTEIN S12 - GUILLARDIA THETA (CRYPTOMONAS PHI).
RR12_HORVU CHLOROPLAST 30S RIBOSOMAL PROTEIN S12 - HORDEUM VULGARE (BARLEY).
RR12_MAIZE CHLOROPLAST 30S RIBOSOMAL PROTEIN S12 - ZEA MAYS (MAIZE).
RR12_MARPO CHLOROPLAST 30S RIBOSOMAL PROTEIN S12 - MARCHANTIA POLYMORPHA (LIVERWORT).
RR12_ODOSI CHLOROPLAST 30S RIBOSOMAL PROTEIN S12 - ODONTELLA SINENSIS.
RR12_ORYSA CHLOROPLAST 30S RIBOSOMAL PROTEIN S12 - ORYZA SATIVA (RICE).
RR12_PINTH CHLOROPLAST 30S RIBOSOMAL PROTEIN S12 - PINUS THUNBERGII (GREEN PINE) (JAPANESE BLACK PINE).
RR12_PORPU CHLOROPLAST 30S RIBOSOMAL PROTEIN S12 - PORPHYRA PURPUREA.
RR12_SOYBN CHLOROPLAST 30S RIBOSOMAL PROTEIN S12 - GLYCINE MAX (SOYBEAN).
RR12_SPIMX CHLOROPLAST 30S RIBOSOMAL PROTEIN S12 - SPIROGYRA MAXIMA.
RR12_TOBAC CHLOROPLAST 30S RIBOSOMAL PROTEIN S12 - NICOTIANA TABACUM (COMMON TOBACCO), AND NICOTIANA PLUMBAGINIFOLIA (LEADWORT-LEAVED TOBACCO).
RS12_ANANI 30S RIBOSOMAL PROTEIN S12 - ANACYSTIS NIDULANS.
RS12_BACST 30S RIBOSOMAL PROTEIN S12 (BS12) - BACILLUS STEAROTHERMOPHILUS.
RS12_BACSU 30S RIBOSOMAL PROTEIN S12 (BS12) - BACILLUS SUBTILIS.
RS12_BORBU 30S RIBOSOMAL PROTEIN S12 - BORRELIA BURGDORFERI (LYME DISEASE SPIROCHETE).
RS12_ECOLI 30S RIBOSOMAL PROTEIN S12 - ESCHERICHIA COLI, AND SALMONELLA TYPHIMURIUM.
RS12_ERWAM 30S RIBOSOMAL PROTEIN S12 - ERWINIA AMYLOVORA.
RS12_HAEIN 30S RIBOSOMAL PROTEIN S12 (STREPTOMYCIN RESISTANCE PROTEIN) - HAEMOPHILUS INFLUENZAE.
RS12_HELPY 30S RIBOSOMAL PROTEIN S12 - HELICOBACTER PYLORI (CAMPYLOBACTER PYLORI).
RS12_LEPBI 30S RIBOSOMAL PROTEIN S12 - LEPTOSPIRA BIFLEXA.
RS12_MICLU 30S RIBOSOMAL PROTEIN S12 - MICROCOCCUS LUTEUS (MICROCOCCUS LYSODEIKTICUS).
RS12_MYCBO 30S RIBOSOMAL PROTEIN S12 - MYCOBACTERIUM BOVIS.
RS12_MYCGE 30S RIBOSOMAL PROTEIN S12 - MYCOPLASMA GENITALIUM.
RS12_MYCIT 30S RIBOSOMAL PROTEIN S12 - MYCOBACTERIUM INTRACELLULARE.
RS12_MYCLE 30S RIBOSOMAL PROTEIN S12 - MYCOBACTERIUM LEPRAE.
RS12_MYCPN 30S RIBOSOMAL PROTEIN S12 - MYCOPLASMA PNEUMONIAE.
RS12_MYCSM 30S RIBOSOMAL PROTEIN S12 - MYCOBACTERIUM SMEGMATIS.
RS12_MYCTU 30S RIBOSOMAL PROTEIN S12 - MYCOBACTERIUM TUBERCULOSIS.
RS12_RICPR 30S RIBOSOMAL PROTEIN S12 - RICKETTSIA PROWAZEKII.
RS12_SPIPL 30S RIBOSOMAL PROTEIN S12 - SPIRULINA PLATENSIS.
RS12_STAAU 30S RIBOSOMAL PROTEIN S12 - STAPHYLOCOCCUS AUREUS.
RS12_STRPN 30S RIBOSOMAL PROTEIN S12 - STREPTOCOCCUS PNEUMONIAE.
RS12_SYNY3 30S RIBOSOMAL PROTEIN S12 - SYNECHOCYSTIS SP. (STRAIN PCC 6803).
RS12_THETH 30S RIBOSOMAL PROTEIN S12 - THERMUS AQUATICUS (SUBSP. THERMOPHILUS).
RS12_THICU 30S RIBOSOMAL PROTEIN S12 - THIOBACILLUS CUPRINUS.
RS12_TREPA 30S RIBOSOMAL PROTEIN S12 - TREPONEMA PALLIDUM.
RT12_ALLCE MITOCHONDRIAL RIBOSOMAL PROTEIN S12 - ALLIUM CEPA (ONION).
RT12_ARATH MITOCHONDRIAL RIBOSOMAL PROTEIN S12 - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).
RT12_BRANA MITOCHONDRIAL RIBOSOMAL PROTEIN S12 - BRASSICA NAPUS (RAPE).
RT12_CHLS6 MITOCHONDRIAL RIBOSOMAL PROTEIN S12 - CHLORARACHNION SP. (STRAIN CCMP 621) (PEDINOMONAS MINUTISSIMA).
RT12_CHOCR MITOCHONDRIAL RIBOSOMAL PROTEIN S12 - CHONDRUS CRISPUS (CARRAGHEEN).
RT12_HELAN MITOCHONDRIAL RIBOSOMAL PROTEIN S12 - HELIANTHUS ANNUUS (COMMON SUNFLOWER).
RT12_MAGSO MITOCHONDRIAL RIBOSOMAL PROTEIN S12 - MAGNOLIA SOULANGEANA, AND MAGNOLIA GRANDIFLORA.
RT12_MAIZE MITOCHONDRIAL RIBOSOMAL PROTEIN S12 - ZEA MAYS (MAIZE), AND TRITICUM AESTIVUM (WHEAT).
RT12_MARPO MITOCHONDRIAL RIBOSOMAL PROTEIN S12 - MARCHANTIA POLYMORPHA (LIVERWORT).
RT12_NICSY MITOCHONDRIAL RIBOSOMAL PROTEIN S12 - NICOTIANA SYLVESTRIS (WOOD TOBACCO).
RT12_OENHO 40S RIBOSOMAL PROTEIN S12, MITOCHONDRIAL PRECURSOR - OENOTHERA HOOKERI (HOOKER'S EVENING PRIMROSE).
RT12_ORYSA MITOCHONDRIAL RIBOSOMAL PROTEIN S12 - ORYZA SATIVA (RICE).
RT12_PANGI MITOCHONDRIAL RIBOSOMAL PROTEIN S12 - PANAX GINSENG (KOREAN GINSENG).
RT12_PARTE MITOCHONDRIAL RIBOSOMAL PROTEIN S12 - PARAMECIUM TETRAURELIA.
RT12_PETHY MITOCHONDRIAL RIBOSOMAL PROTEIN S12 - PETUNIA HYBRIDA (PETUNIA), AND PETUNIA PARODII (PETUNIA).
RT12_PINSY MITOCHONDRIAL RIBOSOMAL PROTEIN S12 - PINUS SYLVESTRIS (SCOTS PINE).
RT12_PROWI MITOCHONDRIAL RIBOSOMAL PROTEIN S12 - PROTOTHECA WICKERHAMII.
RT12_RAPSA MITOCHONDRIAL RIBOSOMAL PROTEIN S12 - RAPHANUS SATIVUS (RADISH).
YN8K_YEAST PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN YNR036C - SACCHAROMYCES CEREVISIAE (BAKER'S YEAST).

RT12_ACACA MITOCHONDRIAL RIBOSOMAL PROTEIN S12 - ACANTHAMOEBA CASTELLANII (AMOEBA).
RT12_DROME 40S RIBOSOMAL PROTEIN S12, MITOCHONDRIAL PRECURSOR (MT-RPS12) (TECHNICAL KNOCKOUT LOCUS PROTEIN) - DROSOPHILA MELANOGASTER (FRUIT FLY).
RT12_MOUSE 40S RIBOSOMAL PROTEIN S12, MITOCHONDRIAL PRECURSOR (MT-RPS12) - MUS MUSCULUS (MOUSE).

Q23886 RIBOSOMAL PROTEIN S12 - DICTYOSTELIUM DISCOIDEUM (SLIME MOLD).
RT12_HUMAN 40S RIBOSOMAL PROTEIN S12, MITOCHONDRIAL PRECURSOR (MT-RPS12) - HOMO SAPIENS (HUMAN).
Scan History
OWL30_2    2  100  NSINGLE    
SPTR37_9f 2 85 NSINGLE
Initial Motifs
Motif 1  width=16
Element Seqn Id St Int Rpt
CPQKQGVCLRVSTRTP RT12_HELAN 27 27 -
CPQKQGVCLRVSTRTP RT12_MAIZE 27 27 -
CPQKQGVCLRVSTRTP RT12_OENHO 90 90 -
CPQKQGVCPRVSTRTP RT12_PETHY 27 27 -
CPQKQGVCLRVSTRTP RT12_ORYSA 27 27 -
CPQKQGVCPRVSTRTP RT12_NICSY 27 27 -
CPQKTGVCPRVSTRTP RT12_ARATH 27 27 -
CPQKLGACPRVSTRTP RT12_BRANA 27 27 -
CPQKLGACPRVSTRTP RT12_RAPSA 27 27 -
CPQKQGVRPRVPTRTP RT12_PANGI 27 27 -
CPQKQGVRPRVPTRTP RT12_MAGSO 27 27 -

Motif 2 width=16
Element Seqn Id St Int Rpt
PKKPNSALRKIAKVRL RT12_HELAN 42 -1 -
PKKPNSALRKIAKVRL RT12_MAIZE 42 -1 -
PKKPNSALGKIAKVRL RT12_OENHO 105 -1 -
PKKPNSAPRKIAKVRL RT12_PETHY 42 -1 -
PKKPNSALRKIAKVRL RT12_ORYSA 42 -1 -
PKKPNSAPRKIAKVRL RT12_NICSY 42 -1 -
PKKPNSAPRKIAKVRL RT12_ARATH 42 -1 -
PKKPNSAPRKIAKVRL RT12_BRANA 42 -1 -
PKKPNSAPRKIAKVRL RT12_RAPSA 42 -1 -
PKKPNSAPRKIAKVRL RT12_PANGI 42 -1 -
PKKPNSAPRKIAKVRL RT12_MAGSO 42 -1 -

Motif 3 width=20
Element Seqn Id St Int Rpt
SNRHDIFAYIPGEGHNLQEH RT12_HELAN 58 0 -
SNRHDIFAYIPGEGHNLQEH RT12_MAIZE 58 0 -
SNRNDVFAYIPGEGHNLQEH RT12_OENHO 121 0 -
SNRHDIFAHIPGEGHNLQEH RT12_PETHY 58 0 -
SNRHDIFAHIPGEGHNSQEH RT12_ORYSA 58 0 -
SNRHDIFAHIPGEGHNSQEH RT12_NICSY 58 0 -
SNRHDIFAHIPGEGHNSQEH RT12_ARATH 58 0 -
SNRHDIFAHIPGEGHNSQEH RT12_BRANA 58 0 -
SNRHDIFAHIPGEGHNSQEH RT12_RAPSA 58 0 -
ANRHDIFPHIPGEGHNSQEH RT12_PANGI 58 0 -
SNRHDIFAHIPGEGHNSQEH RT12_MAGSO 58 0 -

Motif 4 width=18
Element Seqn Id St Int Rpt
HSIVLIRGGRVKDLPGVK RT12_HELAN 77 -1 -
HSIVLVRGGRVKDLPGVK RT12_MAIZE 77 -1 -
HSMVLVRGGRVKDLPGVK RT12_OENHO 140 -1 -
HSMVLIRGGRVKDSPGVK RT12_PETHY 77 -1 -
HSIVLVRGGRVKDSPGVK RT12_ORYSA 77 -1 -
HSMVLIRGGRVKDSPGVK RT12_NICSY 77 -1 -
HSTVLIRGGRVKDSPGVK RT12_ARATH 77 -1 -
HSQVLIRGGRVKDSPGVK RT12_BRANA 77 -1 -
HSQVLIRGGRVKDSPGVK RT12_RAPSA 77 -1 -
HSMVLIRGGRVKDSPGVK RT12_PANGI 77 -1 -
HPMVLIRGGRVKDSPGVK RT12_MAGSO 77 -1 -

Motif 5 width=17
Element Seqn Id St Int Rpt
KFHCIRGVKDLLGIPDR RT12_HELAN 94 -1 -
KFHCIRGVKDLLGIPDR RT12_MAIZE 94 -1 -
KFHCIRGVKDLLGIPDR RT12_OENHO 157 -1 -
KSHCIRGVKDLLGIPDR RT12_PETHY 94 -1 -
KSHRIRGVKDLLGIPDR RT12_ORYSA 94 -1 -
KFHCIRGVKDLLGIPDR RT12_NICSY 94 -1 -
KSHCIRGVKDLMGIPGR RT12_ARATH 94 -1 -
KSHCIRGVKDLMGIPGR RT12_BRANA 94 -1 -
KSHCIRGVKDLMGIPGR RT12_RAPSA 94 -1 -
KSHCIRGVKDLLGIPDR RT12_PANGI 94 -1 -
KSHRIRGVKDLLGIPNR RT12_MAGSO 94 -1 -

Motif 6 width=13
Element Seqn Id St Int Rpt
RRKGRSKYGAEKP RT12_HELAN 110 -1 -
RRKGRSKYGAERP RT12_MAIZE 110 -1 -
RRRGRSKYGAEKP RT12_OENHO 173 -1 -
RRRGRSKYGAEKP RT12_PETHY 110 -1 -
RRKGRSKYGAERP RT12_ORYSA 110 -1 -
RRRGRSKYGAEKP RT12_NICSY 110 -1 -
RRRGRSKYGAEKP RT12_ARATH 110 -1 -
RRRGRSKYGAEKP RT12_BRANA 110 -1 -
RRSGRSKYGAEKP RT12_RAPSA 110 -1 -
RRRGRSKYGAEKP RT12_PANGI 110 -1 -
RRRGRSKYGAERP RT12_MAGSO 110 -1 -
Final Motifs
Motif 1  width=16
Element Seqn Id St Int Rpt
CPQRRGVCTRVYTTTP RR12_CYAPA 27 27 -
CPQRRGVCTRVYTTTP RS12_ANANI 27 27 -
CPQRRGVCTRVYTTTP RR12_GUITH 26 26 -
CPQRRGVCTRVYTTTP RS12_SPIPL 27 27 -
CPQRRGTCTRVYTITP RR12_CUSEU 27 27 -
CPQRRGTCTRVYTITP RR12_TOBAC 27 27 -
CPQRRGVCTRVYTTTP RR12_CHLVU 27 27 -
CPQRRGVCTRVYTTTP RR12_MARPO 27 27 -
CPQRRGVCTRVYTTTP RS12_SYNY3 27 27 -
SPQRRGVCTRVYTTTP RR12_SPIMX 27 27 -
CPQRRGTCTRVYTITP RR12_SOYBN 27 27 -
CPQKRGVCTRVMTVTP RS12_TREPA 27 27 -
CPQRRGVCTRVYTTTP RR12_ODOSI 27 27 -
CPQRRGVCTRVMTFTP RS12_LEPBI 27 27 -
CPQRRGICTRVMTVTP RS12_BORBU 26 26 -
CPQRRGVCTRVYTTTP RR12_PORPU 27 27 -
CPQKRGVCVRVYTVTP O70089 27 27 -
SPQKRGVCTRVGTMTP RS12_BACST 39 39 -
SPQRRGVCTRVYTTTP RS12_THICU 27 27 -
CPQRRGVCARVYTITP RR12_PINTH 27 27 -
CPQKRGVCTRVYTTTP RS12_HAEIN 26 26 -
CPQRRGTCTRVYTITP RR12_EPIVI 27 27 -
SPQRRGVCTRVFTTTP P97222 27 27 -
CPQRRGTCARVYTINP RR12_MAIZE 27 27 -
CPQRRGTCARVYTINP RR12_HORVU 27 27 -
CPQRRGTCARVYTINP RR12_ORYSA 27 27 -
SPQKRGVATRVGTMTP RS12_STRPN 40 40 -
CPQKRGVCTRVYTTTP RS12_ECOLI 26 26 -
SPQRRGVCTRVYTTTP RS12_MYCIT 27 27 -
SPQRRGVCTRVYTTTP RS12_MYCSM 27 27 -
SPQRRGVCTRVYTTTP RS12_MYCTU 27 27 -
SPQKRGVCTRVGTMTP RS12_STAAU 40 40 -
APFRRGVCTVVRTVTP RS12_THETH 30 30 -
CPQRRGICLRVYTVTP RR12_CHLRE 27 27 -
CPQRRGVCTRVYTTTP RS12_HELPY 27 27 -
SPQKRGVCTRVGTMTP RS12_BACSU 39 39 -
CPQKRGVCTRVYTTTP RS12_ERWAM 27 27 -
NPQRRGVCTRVYTSTP RS12_MYCLE 27 27 -
CPQKQGVCLRVSTRTP RT12_HELAN 27 27 -
CPQKQGVCLRVSTRTP RT12_MAIZE 27 27 -
CPQKRGVCLRVSTRTP RT12_PINSY 27 27 -
CPQKQGVCLRVLTITP RT12_ALLCE 27 27 -
CPQKRAICMRVYTTTP RR12_EUGGR 26 26 -
CPQKQGVCLRVSTRTP RT12_OENHO 90 90 -
SPLKRGVCTRVGTMTP RS12_MYCPN 40 40 -
SPLKRGVCTRVGTMTP RS12_MYCGE 40 40 -
CPQKQGVCLRVSTRSP RT12_MARPO 27 27 -
SPQRRRVCNRVYTTTP RS12_MYCBO 27 27 -
NPMRRGVCTRVYTTTP RS12_MICLU 27 27 -
CPQKQGVCPRVSTRTP RT12_PETHY 27 27 -
SPQKRGVCLQVKTKTP O84446 27 27 -
CPQKQGVCLRVSTRTP P93335 27 27 -
CPQKQGVCLRVSTRTP RT12_ORYSA 27 27 -
CPQKQGVCPRVSTRTP RT12_NICSY 27 27 -
CPQKKGVCTRVFIASP O21239 33 33 -
CPQKQGVRPRLSTRTP O47435 27 27 -
CPQKQGVRPRLSTRTP O48370 27 27 -
CPQKTGVCPRVSTRTP RT12_ARATH 27 27 -
CPQKLGACPRVSTRTP RT12_BRANA 27 27 -
CPQKLGACPRVSTRTP RT12_RAPSA 27 27 -
CPQKQGVRPRVPTRTP RT12_PANGI 27 27 -
CPQKRGVCFRVYTRTP RT12_PROWI 29 29 -
CPQKQGVRPRVPTRTP RT12_MAGSO 27 27 -
CPQKKCICLKVHTITP RR12_ASTLO 27 27 -
SPFRRGVCTRVFTVKP O14182 64 64 -
CPQKLGACPRVSTRTP O24084 27 27 -
CPQRKGVVLRVMVLKP YN8K_YEAST 55 55 -
CPQKRGVCMRLLTRSP RT12_CHLS6 27 27 -
CPQKKGICMKVYTTSP RT12_CHOCR 27 27 -
NPFKSGVCLVVKTVTP RS12_RICPR 27 27 -
CPQKKGIVLKILIKTP Q25818 27 27 -
CPQKEGSVLKPRIVTP RT12_PARTE 27 27 -

Motif 2 width=16
Element Seqn Id St Int Rpt
PKKPNSALRKVARVRL RR12_CYAPA 42 -1 -
PKKPNSALRKVARVRL RS12_ANANI 42 -1 -
PKKPNSALRKVARVRL RR12_GUITH 41 -1 -
PKKPNSALRKVARVRL RS12_SPIPL 42 -1 -
PKKPNSALRKVARVRL RR12_CUSEU 42 -1 -
PKKPNSALRKVARVRL RR12_TOBAC 42 -1 -
PKKPNSALRKVARVRL RR12_CHLVU 42 -1 -
PKKPNSALRKIARVRL RR12_MARPO 42 -1 -
PKKPNSALRKVARVRL RS12_SYNY3 42 -1 -
PKKPNSALRKVARVRL RR12_SPIMX 42 -1 -
PKKPNSALRKVARVRL RR12_SOYBN 42 -1 -
PKKPNSALRKVARVRL RS12_TREPA 42 -1 -
PKKPNSAIRKVARVRL RR12_ODOSI 42 -1 -
PKKPNSALRKVARVRL RS12_LEPBI 42 -1 -
PKKPNSALRKVARVRL RS12_BORBU 41 -1 -
PKKPNSALRKVARVRL RR12_PORPU 42 -1 -
PKKPNSALRKVARVRL O70089 42 -1 -
PKKPNSALRKYARVRL RS12_BACST 54 -1 -
PKKPNSALRKVAKVPL RS12_THICU 42 -1 -
PKKPNSALRKVARVRL RR12_PINTH 42 -1 -
PKKPNSALRKVCRIRL RS12_HAEIN 41 -1 -
PKKPNSALRKVARVRL RR12_EPIVI 42 -1 -
PKKPNSALRKVARVRL P97222 42 -1 -
PKKPNSALRKVARVRL RR12_MAIZE 42 -1 -
PKKPNSALRKVARVRL RR12_HORVU 42 -1 -
PKKPNSALRKVARVRL RR12_ORYSA 42 -1 -
PKKPNSALRKFARVRL RS12_STRPN 55 -1 -
PKKPNSALRKVCRVRL RS12_ECOLI 41 -1 -
PKKPNSALRKVARVKL RS12_MYCIT 42 -1 -
PKKPNSALRKVARVKL RS12_MYCSM 42 -1 -
PKKPNSALRKVARVKL RS12_MYCTU 42 -1 -
PKKPNSALRKYARVRL RS12_STAAU 55 -1 -
PKKPNSALRKVAKVRL RS12_THETH 45 -1 -
PKKPNSALRKVARVRL RR12_CHLRE 42 -1 -
PKKPNSALRKVAKVRL RS12_HELPY 42 -1 -
PKKPNSALRKYARVRL RS12_BACSU 54 -1 -
PKKPNSALRKVCRVRL RS12_ERWAM 42 -1 -
PKKPNSRLRKVARVKL RS12_MYCLE 42 -1 -
PKKPNSALRKIAKVRL RT12_HELAN 42 -1 -
PKKPNSALRKIAKVRL RT12_MAIZE 42 -1 -
PKKPNSALRKIAKVRL RT12_PINSY 42 -1 -
PKKPNSALRKIAKVRL RT12_ALLCE 42 -1 -
PKKPNSALRKVTRVRL RR12_EUGGR 41 -1 -
PKKPNSALGKIAKVRL RT12_OENHO 105 -1 -
PKKPNSALRKYAKVRL RS12_MYCPN 55 -1 -
PRKPNSALRKYAKVRL RS12_MYCGE 55 -1 -
PKKPNSALRKIAKVRL RT12_MARPO 42 -1 -
PKKPNSALRKVARVKL RS12_MYCBO 42 -1 -
PTKPNSAVRKVARVRL RS12_MICLU 42 -1 -
PKKPNSAPRKIAKVRL RT12_PETHY 42 -1 -
PKKPNSALRKVAWVRL O84446 42 -1 -
PKKPNSALRKIAKVRL P93335 42 -1 -
PKKPNSALRKIAKVRL RT12_ORYSA 42 -1 -
PKKPNSAPRKIAKVRL RT12_NICSY 42 -1 -
PKKPNSAKRKVARVRL O21239 48 -1 -
PKKPNSAPRKIAKVRL O47435 42 -1 -
PKKPNSAPRKIAKVRL O48370 42 -1 -
PKKPNSAPRKIAKVRL RT12_ARATH 42 -1 -
PKKPNSAPRKIAKVRL RT12_BRANA 42 -1 -
PKKPNSAPRKIAKVRL RT12_RAPSA 42 -1 -
PKKPNSAPRKIAKVRL RT12_PANGI 42 -1 -
PKKPNSALRKVAKIRL RT12_PROWI 44 -1 -
PKKPNSAPRKIAKVRL RT12_MAGSO 42 -1 -
PKKPNSALRKVTRVKI RR12_ASTLO 42 -1 -
PKKPNSAVRKVARVRL O14182 79 -1 -
PKKPNSALRKIAKVRL O24084 42 -1 -
PKKPNSAQRKACRVRL YN8K_YEAST 70 -1 -
PKKPNSAQRRVAKVRL RT12_CHLS6 42 -1 -
PKKPNSAERKVAKVNL RT12_CHOCR 42 -1 -
PKKPNSALRKIATVRL RS12_RICPR 42 -1 -
PKKPNSALRKVAKIRL Q25818 42 -1 -
PKKPNSARRPVAKAKL RT12_PARTE 42 -1 -

Motif 3 width=20
Element Seqn Id St Int Rpt
TSGFEVTAYIPGIGHNLQEH RR12_CYAPA 58 0 -
TSGFEVTAYIPGIGHNLQEH RS12_ANANI 58 0 -
TSGFEVTAYIPGIGHNIQEH RR12_GUITH 57 0 -
TSGFEVTAYIPGIGHNLQEH RS12_SPIPL 58 0 -
TSGFEITAYIPGIGHNLQEH RR12_CUSEU 58 0 -
TSGFEITAYIPGIGHNLQEH RR12_TOBAC 58 0 -
TSGFEVTAYIPGIGHNLQEH RR12_CHLVU 58 0 -
TSGFEITAYIPGIGHNLQEH RR12_MARPO 58 0 -
TSGFEVTAYIPGIGHNLQEH RS12_SYNY3 58 0 -
TSGFEVTAYIPGIGHNLQEH RR12_SPIMX 58 0 -
TSGFEITAYIPGIGHNLQEH RR12_SOYBN 58 0 -
SSGVEVTAYIPGIGHNLQEH RS12_TREPA 58 0 -
TSDLKVTAYIPGIGHNLQEH RR12_ODOSI 58 0 -
TTGIEVTAYIPGEGHNLQEH RS12_LEPBI 58 0 -
SNGFEVTAYIPGIGHNLQEH RS12_BORBU 57 0 -
TSGFEVTAYIPGVGHNIQEH RR12_PORPU 58 0 -
SNGIEVTAYIPGEGHNLQEH O70089 58 0 -
TNGIEVTAYIPGIGHNLQEH RS12_BACST 70 0 -
TNGFEVISYIGGEGHNLQEH RS12_THICU 58 0 -
TSGFEITAYIPGIDHNLQEH RR12_PINTH 58 0 -
TNGFEVTSYIGGEGHNLQEH RS12_HAEIN 57 0 -
TSGIEITAYIPGIGHNSQEH RR12_EPIVI 58 0 -
TSGIEVTAYIPGEGHNLQEH P97222 58 0 -
TSGFEITAYIPGIGHNLQEH RR12_MAIZE 58 0 -
TSGFEITAYIPGIGHNLQEH RR12_HORVU 58 0 -
TSGFEITAYIPGIGHNLQEH RR12_ORYSA 58 0 -
SNLIEVTAYIPGIGHNLQEH RS12_STRPN 71 0 -
TNGFEVTSYIGGEGHNLQEH RS12_ECOLI 57 0 -
TSQVEVTAYIPGEGHNLQEH RS12_MYCIT 58 0 -
TSQVEVTAYIPGEGHNLQEH RS12_MYCSM 58 0 -
TSQVEVTAYIPGEGHNLQEH RS12_MYCTU 58 0 -
SNNIEINAYIPGIGHNLQEH RS12_STAAU 71 0 -
TSGYEVTAYIPGEGHNLQEH RS12_THETH 61 0 -
TTGFEVTAYIPGVGHNLQEH RR12_CHLRE 58 0 -
TSKFEVISYIPGEGHNLQEH RS12_HELPY 58 0 -
TNGIEVTAYIPGIGHNLQEH RS12_BACSU 70 0 -
TNGFEVTSYIGGEGHNLQEH RS12_ERWAM 58 0 -
TSQVEVTAYIPGEGHNLQEH RS12_MYCLE 58 0 -
SNRHDIFAYIPGEGHNLQEH RT12_HELAN 58 0 -
SNRHDIFAYIPGEGHNLQEH RT12_MAIZE 58 0 -
SNRHDIFAYIPGEGHNLQEH RT12_PINSY 58 0 -
TNRHDIFAYIPGEGHNSQEH RT12_ALLCE 58 0 -
SSGLEVTAYIPGIGHNLQEH RR12_EUGGR 57 0 -
SNRNDVFAYIPGEGHNLQEH RT12_OENHO 121 0 -
TNGFEVLTYIPGEGHNLQEH RS12_MYCPN 71 0 -
TNGFEVLAYIPGEGHNLQEH RS12_MYCGE 71 0 -
TNRNEIIAYIPGEGHNLQEH RT12_MARPO 58 0 -
TSQVEVTAYIPGEGHNLQEH RS12_MYCBO 58 0 -
NGGIEVTAYIPGEGHNLQEH RS12_MICLU 58 0 -
SNRHDIFAHIPGEGHNLQEH RT12_PETHY 58 0 -
SNGQEVIAYIGGEGHNLQEH O84446 58 0 -
SNRHDIFAHIPGEGHNSQEH P93335 58 0 -
SNRHDIFAHIPGEGHNSQEH RT12_ORYSA 58 0 -
SNRHDIFAHIPGEGHNSQEH RT12_NICSY 58 0 -
TNGQEVTAYIPGEGHSLQEH O21239 64 0 -
SNRHEIFAHIPGEGHNSQEH O47435 58 0 -
SNRHEIFAHIPGEGHNSQEH O48370 58 0 -
SNRHDIFAHIPGEGHNSQEH RT12_ARATH 58 0 -
SNRHDIFAHIPGEGHNSQEH RT12_BRANA 58 0 -
SNRHDIFAHIPGEGHNSQEH RT12_RAPSA 58 0 -
ANRHDIFPHIPGEGHNSQEH RT12_PANGI 58 0 -
CNGIVVIASIPGEGHNLQEH RT12_PROWI 60 0 -
SNRHDIFAHIPGEGHNSQEH RT12_MAGSO 58 0 -
ISKMFTTAYIPGIGHNLQEH RR12_ASTLO 60 2 -
STGRSVTAYIPGIGHNAQEH O14182 95 0 -
SNRHDIFAHIPGEGHNSQEH O24084 58 0 -
TNGNVVSAYIPGEGHDAQEH YN8K_YEAST 86 0 -
STKRVIFAHIPGEGHNLSPF RT12_CHLS6 58 0 -
TNGKSIIGYISGEGHTLQEH RT12_CHOCR 58 0 -
SNKRTVNAYIPGEKHSVKEH RS12_RICPR 58 0 -
SNNKELLAYIPGEGKSIQEH Q25818 58 0 -
TNKKFVVAHIPGTGHNLRKH RT12_PARTE 58 0 -

Motif 4 width=18
Element Seqn Id St Int Rpt
HSVVLVRGGRVKDLPGVR RR12_CYAPA 77 -1 -
HSVVMIRGGRVKDLPGVR RS12_ANANI 77 -1 -
HSVVLLRGGRVKDLPGVR RR12_GUITH 76 -1 -
HSVVMIRGGRVKDLPGVR RS12_SPIPL 77 -1 -
HSVVLVRGGRVKDLPGVR RR12_CUSEU 77 -1 -
HSVVLVRGGRVKDLPGVR RR12_TOBAC 77 -1 -
HSVVLVRGGRVKDLPGVR RR12_CHLVU 77 -1 -
HSVVLVRGGRVKDLPGVR RR12_MARPO 77 -1 -
HSVVLIRGGRVKDLPGVR RS12_SYNY3 77 -1 -
HSVVLVRGGRVKDLPGVR RR12_SPIMX 77 -1 -
HSVVLVRGGRVKDLPGVR RR12_SOYBN 77 -1 -
HSIVLIRGGRVKDLPGVR RS12_TREPA 77 -1 -
HSVVLIRGGRVKDLPGVR RR12_ODOSI 77 -1 -
HNVVLIRGGRVKDLPGVR RS12_LEPBI 77 -1 -
HSVVLIRGGRVKDLPGVR RS12_BORBU 76 -1 -
HSVVLIRGGRIKDLPGVR RR12_PORPU 77 -1 -
HSIVLVRGGRVKDLPGVR O70089 77 -1 -
HSVVLIRGGRVKDLRGVR RS12_BACST 89 -1 -
HSVVLVRGGRVKDLPGVR RS12_THICU 77 -1 -
HSVVLVRGGRVKDLPGVR RR12_PINTH 77 -1 -
HSVVLIRGGRVKDLPGVR RS12_HAEIN 76 -1 -
HSSVLVRGGRVKDLPGVR RR12_EPIVI 77 -1 -
HSIVLVRGGRVKDLPGVR P97222 77 -1 -
HSVVLVRGGRVKDLPGVR RR12_MAIZE 77 -1 -
HSVVLVRGGRVKDLPGVR RR12_HORVU 77 -1 -
HSVVLVRGGRVKDLPGVR RR12_ORYSA 77 -1 -
HSVVLLRGGRVKDLPGVR RS12_STRPN 90 -1 -
HSVILIRGGRVKDLPGVR RS12_ECOLI 76 -1 -
HSMVLVRGGRVKDLPGVR RS12_MYCIT 77 -1 -
HSMVLVRGGRVKDLPGVR RS12_MYCSM 77 -1 -
HSMVLVRGGRVKDLPGVR RS12_MYCTU 77 -1 -
HSVVLVRGGRVKDLPGVR RS12_STAAU 90 -1 -
HSVVLIRGGRVKDLPGVR RS12_THETH 80 -1 -
HAVVLVRGGRVKDLPGVR RR12_CHLRE 77 -1 -
HSIVLVRGGRVKDLPGVK RS12_HELPY 77 -1 -
HSVVLIRGGRVKNLPRVR RS12_BACSU 89 -1 -
HSVILIRGGRVKDLPGVR RS12_ERWAM 77 -1 -
HSMVLVRGGRVKDLPGVR RS12_MYCLE 77 -1 -
HSIVLIRGGRVKDLPGVK RT12_HELAN 77 -1 -
HSIVLVRGGRVKDLPGVK RT12_MAIZE 77 -1 -
HSMVLIRGGRVKDLPGVK RT12_PINSY 77 -1 -
HSIVLVRGGRVKDLPGVK RT12_ALLCE 77 -1 -
HSVVLIRGGRVKDLPGVK RR12_EUGGR 76 -1 -
HSMVLVRGGRVKDLPGVK RT12_OENHO 140 -1 -
HSVTLLRGGRVKDLPGVR RS12_MYCPN 90 -1 -
HSVTLLRGGRVKDLPGVR RS12_MYCGE 90 -1 -
HSVVMVRGGRVQDLPGVK RT12_MARPO 77 -1 -
HSMVLVRGGRVKDLPGVQ RS12_MYCBO 77 -1 -
HSIVLVRGGRVKDLPGVR RS12_MICLU 77 -1 -
HSMVLIRGGRVKDSPGVK RT12_PETHY 77 -1 -
HSIVLVQGGRVKDLPGVR O84446 77 -1 -
HSIVLVRGGRVKDSPGVK P93335 77 -1 -
HSIVLVRGGRVKDSPGVK RT12_ORYSA 77 -1 -
HSMVLIRGGRVKDSPGVK RT12_NICSY 77 -1 -
HSVVLIRGGRVKDLPGVK O21239 83 -1 -
HSMVLIRGGRVKDLPGVK O47435 77 -1 -
HSMVLIRGGRVKDLPGVK O48370 77 -1 -
HSTVLIRGGRVKDSPGVK RT12_ARATH 77 -1 -
HSQVLIRGGRVKDSPGVK RT12_BRANA 77 -1 -
HSQVLIRGGRVKDSPGVK RT12_RAPSA 77 -1 -
HSMVLIRGGRVKDSPGVK RT12_PANGI 77 -1 -
HSVVCIRGGRVKDLPGVK RT12_PROWI 79 -1 -
HPMVLIRGGRVKDSPGVK RT12_MAGSO 77 -1 -
HSMVLIRGGRVKDLPGVK RR12_ASTLO 79 -1 -
HAVVLLRGGRAQDCPGVQ O14182 114 -1 -
HSAGVVRGGRVKDSPGVK O24084 77 -1 -
HSIVYVRGGRCQDLPGVK YN8K_YEAST 105 -1 -
FSVVLVRGGNVRDLPGVR RT12_CHLS6 77 -1 -
HSLVLVRGGRVKDLPGVQ RT12_CHOCR 77 -1 -
HDRVLVRGGQVPDLPGVK RS12_RICPR 77 -1 -
HNFVLIKGGRVKDLPGIK Q25818 77 -1 -
HSTILVRGGGCRDLPGVR RT12_PARTE 77 -1 -

Motif 5 width=17
Element Seqn Id St Int Rpt
RYHIVRGALDAAGVKDR RR12_CYAPA 94 -1 -
RYHIIRGTLDTAGVKDR RS12_ANANI 94 -1 -
RYHIIRGTLDAAGVKNR RR12_GUITH 93 -1 -
RYHIIRGTLDTAGVKDR RS12_SPIPL 94 -1 -
RYHIVRGTLDAVGVKDR RR12_CUSEU 94 -1 -
RYHIVRGTLDAVGVKDR RR12_TOBAC 94 -1 -
RYHIVRGTLDSAGVKDR RR12_CHLVU 94 -1 -
RYHIIRGTLDAVGVKDR RR12_MARPO 94 -1 -
RYHIVRGTLDATGVKDR RS12_SYNY3 94 -1 -
RYHIVRGTLDVVGVKDR RR12_SPIMX 94 -1 -
RYHIVRGTLDAVGVKDR RR12_SOYBN 94 -1 -
RYHIIRGAKDTLGVVDR RS12_TREPA 94 -1 -
RYHIIRGALDSVGVKDR RR12_ODOSI 94 -1 -
RYHIIRGTLDTLGVDKR RS12_LEPBI 94 -1 -
RYHIVRGAKDTLGVNNR RS12_BORBU 93 -1 -
RYHVVRGTLDAAGVKDR RR12_PORPU 94 -1 -
RYKIIRGALDAAGVEGR O70089 94 -1 -
RYHIIRGGLDTAGVANR RS12_BACST 106 -1 -
RYHIVRGSLDLQGVKDR RS12_THICU 94 -1 -
RYHIVRGTLDAAEVKDR RR12_PINTH 94 -1 -
RYHTVRGALDCAGVKDR RS12_HAEIN 93 -1 -
RYHIIRGTLDAVGVKDR RR12_EPIVI 94 -1 -
RYKIIRGSLDTQGVKNR P97222 94 -1 -
RYRIIRGTLDAVAVKNR RR12_MAIZE 94 -1 -
RYRIIRGTLDAVAVKNR RR12_HORVU 94 -1 -
RYRIIRGALDAVAVKNR RR12_ORYSA 94 -1 -
RYHIVRGALDTAGVNDR RS12_STRPN 107 -1 -
RYHTVRGALDCSGVKDR RS12_ECOLI 93 -1 -
RYKIIRGSLDTQGVKNR RS12_MYCIT 94 -1 -
RYKIIRGSLDTQGVKNR RS12_MYCSM 94 -1 -
RYKIIRGSLDTQGVKNR RS12_MYCTU 94 -1 -
RYHIVRGALDTSGVDGR RS12_STAAU 107 -1 -
RYHIVRGVYDAAGVKDR RS12_THETH 97 -1 -
RYHIVRGSLDTAGVKNR RR12_CHLRE 94 -1 -
KYHIVRGALDTAGVNKR RS12_HELPY 94 -1 -
RYHIVRGALDTAGVENR RS12_BACSU 106 -1 -
RYHTVRGALDCSGVKDR RS12_ERWAM 94 -1 -
RYKIIRGSLDTQGVKNR RS12_MYCLE 94 -1 -
KFHCIRGVKDLLGIPDR RT12_HELAN 94 -1 -
KFHCIRGVKDLLGIPDR RT12_MAIZE 94 -1 -
KFHRIRGVKDLLGIPGR RT12_PINSY 94 -1 -
KFHCIRGVKDLLGIPDR RT12_ALLCE 94 -1 -
KYHVIRGCLDAASVKNR RR12_EUGGR 93 -1 -
KFHCIRGVKDLLGIPDR RT12_OENHO 157 -1 -
RYHIVRGTLDTVGVEKR RS12_MYCPN 107 -1 -
RYHIVRGTLDTVGVDKR RS12_MYCGE 107 -1 -
KYHCIRGVKDLQGIPGR RT12_MARPO 94 -1 -
QYKIIRGSLDTQGVKNR RS12_MYCBO 94 -1 -
RYKIVRGALDTQGVKNR RS12_MICLU 94 -1 -
KSHCIRGVKDLLGIPDR RT12_PETHY 94 -1 -
RYHIVRGALDCAAVKNR O84446 94 -1 -
KSHRIRGVKDLLGIPDR P93335 94 -1 -
KSHRIRGVKDLLGIPDR RT12_ORYSA 94 -1 -
KFHCIRGVKDLLGIPDR RT12_NICSY 94 -1 -
KYHIVRGTFDLQGVQNR O21239 100 -1 -
KSHCIRGVKDLLGIPDR O47435 94 -1 -
KSHCIRGVKDLLGIPDR O48370 94 -1 -
KSHCIRGVKDLMGIPGR RT12_ARATH 94 -1 -
KSHCIRGVKDLMGIPGR RT12_BRANA 94 -1 -
KSHCIRGVKDLMGIPGR RT12_RAPSA 94 -1 -
KSHCIRGVKDLLGIPDR RT12_PANGI 94 -1 -
KYKVVRGRLDLQGVVNR RT12_PROWI 96 -1 -
KSHRIRGVKDLLGIPNR RT12_MAGSO 94 -1 -
KYKVIRGCLDAAGVKNR RR12_ASTLO 96 -1 -
QYHVVRGVYDIAGVAGR O14182 131 -1 -
KSHGIRGVKDLMGIPGE O24084 94 -1 -
KYHVIRGAGDLSGVVNR YN8K_YEAST 122 -1 -
RYKTIRGVKDLAPVLSR RT12_CHLS6 94 -1 -
QYHFVRGVYDLHAVGTR RT12_CHOCR 94 -1 -
KYHIVLGAYDIAGVKGR RS12_RICPR 94 -1 -
KYKIIRGSLDSTGVLNR Q25818 94 -1 -
RHTCIRGVSDFLGVRDK RT12_PARTE 94 -1 -

Motif 6 width=13
Element Seqn Id St Int Rpt
RRQSRSKYGAKRP RR12_CYAPA 110 -1 -
RRQSRSKYGAKRP RS12_ANANI 110 -1 -
RKQSRSKYGAKKP RR12_GUITH 109 -1 -
RRNGRSKYGAKRP RS12_SPIPL 110 -1 -
RQQGRSKYGVKKP RR12_CUSEU 110 -1 -
RQQGRSKYGVKKP RR12_TOBAC 110 -1 -
RSQSRSKYGVKRP RR12_CHLVU 110 -1 -
RQQGRSKYGVKKS RR12_MARPO 110 -1 -
RKQGRSKYGTKRE RS12_SYNY3 110 -1 -
RRKGRSKYGVKRP RR12_SPIMX 110 -1 -
RQQGRSQYGAKKP RR12_SOYBN 110 -1 -
RKRGRSKYGAKRP RS12_TREPA 110 -1 -
RTQGRSKYGVKKP RR12_ODOSI 110 -1 -
RRKGRSKYGAKRP RS12_LEPBI 110 -1 -
RKKGRSKYGTKKP RS12_BORBU 109 -1 -
RRKSRSKYGTKKP RR12_PORPU 110 -1 -
RRQSRSKYGTKRP O70089 110 -1 -
RMQGRSKYGAKKP RS12_BACST 122 -1 -
RKQSRSKYGAKRP RS12_THICU 110 -1 -
RQQGRSKYGVKKQ RR12_PINTH 110 -1 -
RKQGRSKYGVKRP RS12_HAEIN 109 -1 -
RQQGRSKYGVKIK RR12_EPIVI 110 -1 -
RKQARSRYGAKKE P97222 110 -1 -
RQQGRSKYGAKKP RR12_MAIZE 110 -1 -
RQQGRSKYGVKKP RR12_HORVU 110 -1 -
RQQGRSKYGVKKP RR12_ORYSA 110 -1 -
RKQGRSKYGTKRP RS12_STRPN 123 -1 -
RKQARSKYGVKRP RS12_ECOLI 109 -1 -
RKQARSRYGAKKE RS12_MYCIT 110 -1 -
RKQARSRYGAKKE RS12_MYCSM 110 -1 -
RKQARSRYGAKKE RS12_MYCTU 110 -1 -
RRQGRSLYGTKKP RS12_STAAU 123 -1 -
RKKSRSKYGTKKP RS12_THETH 113 -1 -
RVQSRSKYGVKMG RR12_CHLRE 110 -1 -
RTVSRSKYGTKKA RS12_HELPY 110 -1 -
RAQGRPKYGTKKP RS12_BACSU 122 -1 -
RKQARSKYGVKNA RS12_ERWAM 110 -1 -
RKQARSRYGAKKE RS12_MYCLE 110 -1 -
RRKGRSKYGAEKP RT12_HELAN 110 -1 -
RRKGRSKYGAERP RT12_MAIZE 110 -1 -
RKRGRSKYGAERP RT12_PINSY 110 -1 -
RRRGRSKYGAEKP RT12_ALLCE 110 -1 -
RKNARSKYGVKKP RR12_EUGGR 109 -1 -
RRRGRSKYGAEKP RT12_OENHO 173 -1 -
RRQQRSAYGAKKP RS12_MYCPN 123 -1 -
RRQQRSAYGAKKP RS12_MYCGE 123 -1 -
RRRGRSKYGTKKP RT12_MARPO 110 -1 -
RKQARSRYGAKKE RS12_MYCBO 110 -1 -
RGQARSRYGAKKE RS12_MICLU 110 -1 -
RRRGRSKYGAEKP RT12_PETHY 110 -1 -
RKQSRSRYGAKRP O84446 110 -1 -
RRKGRSKYGAERP P93335 110 -1 -
RRKGRSKYGAERP RT12_ORYSA 110 -1 -
RRRGRSKYGAEKP RT12_NICSY 110 -1 -
RRQGRSLYGTKKQ O21239 116 -1 -
RRRGRSKYGAEKP O47435 110 -1 -
RRRGRSKYGAEKP O48370 110 -1 -
RRRGRSKYGAEKP RT12_ARATH 110 -1 -
RRRGRSKYGAEKP RT12_BRANA 110 -1 -
RRSGRSKYGAEKP RT12_RAPSA 110 -1 -
RRRGRSKYGAEKP RT12_PANGI 110 -1 -
RKQSRSLYGTPKS RT12_PROWI 112 -1 -
RRRGRSKYGAERP RT12_MAGSO 110 -1 -
RKNGRSKYGVKRP RR12_ASTLO 112 -1 -
RVTSRSKYGVKKP O14182 147 -1 -
EIIGRSKYGAEKP O24084 110 -1 -
RISSRSKYGAKKP YN8K_YEAST 138 -1 -
RTNGRSKYGTKRP RT12_CHLS6 110 -1 -
RKKSRSKYGKKLF RT12_CHOCR 110 -1 -
RKQGRSRYGAHRK RS12_RICPR 110 -1 -
RKTSRSKYGTKKY Q25818 110 -1 -
KTKRRSIYGIKRP RT12_PARTE 110 -1 -