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PR00906

Identifier
SECA  [View Relations]  [View Alignment]  
Accession
PR00906
No. of Motifs
7
Creation Date
01-JUL-1998  (UPDATE 07-JUN-1999)
Title
SecA protein signature
Database References

PROSITE; PS01312 SECA
PFAM; PF01043 SecA_protein
INTERPRO; IPR000185
Literature References
1. LILL, R., CUNNINGHAM, K., BRUNDAGE, L.A., ITO, K., OLIVER, D. AND
WICKNER, W.
SecA protein hydrolyzes ATP and is an essential component of the protein
translocation ATPase of Escherichia coli.
EMBO J. 8(3) 961-966 (1989).
 
2. SCHMIDT, M.G., ROLLO, E.E., GRODBERG, J. AND OLIVER, D.B.
Nucleotide sequence of the secA gene and secA(Ts) mutations preventing
protein export in Escherichia coli.
J.BACTERIOL. 170(8) 3404-3414 (1988). 
 
3. VALENTIN, K.
SecA is plastid-encoded in red alga: implications for the evolution of
plastid genomes and thylakoid protein import apparatus.
MOL.GEN.GENET. 236 245-250 (1993).
 
4. NOHARA, T., NAKAI, M. GOTO, A. AND ENDO, T.
Isolation and characterization of the cDNA for pea chloroplast SecA.
Evolutionary conservation of the bacterial-type SecA-dependent protein
transport within chloroplasts.
FEBS LETT. 364 305-308 (1995).

Documentation
The secA protein is one of seven secretory proteins (secA-F and secY) that
form the prokaryotic protein translocation apparatus. SecA has a central
role in coupling the hydrolysis of ATP to the transfer of pre-secretory
periplasmic and outer membrane proteins across the membrane [1,2].
 
Homologues of secA are also encoded in chloroplast genomes of some algae
[3], as well as in the nuclear genome of some plants [4]; they may contain
a similar secA protein-dependent system for intra-organellar transport
into thylakoids.
 
SECA is a 7-element fingerprint that provides a signature for the secA
protein family. The fingerprint was derived from an initial alignment of 9
sequences: the motifs were drawn from conserved regions of the hydrophobic
N-terminal and central regions of the alignment. Three iterations on
OWL30.1 were required to reach convergence, at which point a true set
comprising 32 sequences was identified. Two partial matches were also found,
MBU43178 and ZMU71123, both of which are secA protein fragments.
 
An update on SPTR37_9f identified a true set of 33 sequences, and 2
partial matches.
Summary Information
  33 codes involving  7 elements
1 codes involving 6 elements
0 codes involving 5 elements
0 codes involving 4 elements
1 codes involving 3 elements
0 codes involving 2 elements
Composite Feature Index
733333333333333
61101111
50000000
40000000
30011100
20000000
1234567
True Positives
O84707        O87123        SEA1_MYCTU    SEA2_MYCTU    
SECA_ANTSP SECA_BACSU SECA_BORBU SECA_CAUCR
SECA_CYACA SECA_ECOLI SECA_GUITH SECA_HAEIN
SECA_HELPY SECA_LISMO SECA_MYCBO SECA_MYCGE
SECA_MYCLE SECA_MYCPN SECA_MYCSM SECA_ODOSI
SECA_OLILU SECA_PAVLU SECA_PEA SECA_PORPU
SECA_RHOCA SECA_SPIOL SECA_STAAU SECA_STACA
SECA_STRGR SECA_STRLI SECA_SYNP7 SECA_SYNY3
SECA_TREPA
True Positive Partials
Codes involving 6 elements
O67718
Codes involving 3 elements
P72016
Sequence Titles
O84707      PROTEIN TRANSLOCASE - CHLAMYDIA TRACHOMATIS.  
O87123 SECA - VIBRIO ALGINOLYTICUS.
SEA1_MYCTU PREPROTEIN TRANSLOCASE SECA 1 SUBUNIT - MYCOBACTERIUM TUBERCULOSIS.
SEA2_MYCTU PREPROTEIN TRANSLOCASE SECA 2 SUBUNIT - MYCOBACTERIUM TUBERCULOSIS.
SECA_ANTSP PREPROTEIN TRANSLOCASE SECA SUBUNIT - ANTITHAMNION SP.
SECA_BACSU PREPROTEIN TRANSLOCASE SECA SUBUNIT - BACILLUS SUBTILIS.
SECA_BORBU PREPROTEIN TRANSLOCASE SECA SUBUNIT - BORRELIA BURGDORFERI (LYME DISEASE SPIROCHETE).
SECA_CAUCR PREPROTEIN TRANSLOCASE SECA SUBUNIT - CAULOBACTER CRESCENTUS.
SECA_CYACA PREPROTEIN TRANSLOCASE SECA SUBUNIT - CYANIDIUM CALDARIUM (GALDIERIA SULPHURARIA).
SECA_ECOLI PREPROTEIN TRANSLOCASE SECA SUBUNIT - ESCHERICHIA COLI.
SECA_GUITH PREPROTEIN TRANSLOCASE SECA SUBUNIT - GUILLARDIA THETA (CRYPTOMONAS PHI).
SECA_HAEIN PREPROTEIN TRANSLOCASE SECA SUBUNIT - HAEMOPHILUS INFLUENZAE.
SECA_HELPY PREPROTEIN TRANSLOCASE SECA SUBUNIT - HELICOBACTER PYLORI (CAMPYLOBACTER PYLORI).
SECA_LISMO PREPROTEIN TRANSLOCASE SECA SUBUNIT - LISTERIA MONOCYTOGENES.
SECA_MYCBO PREPROTEIN TRANSLOCASE SECA SUBUNIT - MYCOBACTERIUM BOVIS.
SECA_MYCGE PREPROTEIN TRANSLOCASE SECA SUBUNIT - MYCOPLASMA GENITALIUM.
SECA_MYCLE PREPROTEIN TRANSLOCASE SECA SUBUNIT - MYCOBACTERIUM LEPRAE.
SECA_MYCPN PREPROTEIN TRANSLOCASE SECA SUBUNIT - MYCOPLASMA PNEUMONIAE.
SECA_MYCSM PREPROTEIN TRANSLOCASE SECA SUBUNIT - MYCOBACTERIUM SMEGMATIS.
SECA_ODOSI PREPROTEIN TRANSLOCASE SECA SUBUNIT - ODONTELLA SINENSIS.
SECA_OLILU PREPROTEIN TRANSLOCASE SECA SUBUNIT - OLISTHODISCUS LUTEUS (HETEROSIGMA AKASHIWO).
SECA_PAVLU PREPROTEIN TRANSLOCASE SECA SUBUNIT - PAVLOVA LUTHERII (MONOCHRYSIS LUTHERI).
SECA_PEA PREPROTEIN TRANSLOCASE SECA SUBUNIT PRECURSOR - PISUM SATIVUM (GARDEN PEA).
SECA_PORPU PREPROTEIN TRANSLOCASE SECA SUBUNIT - PORPHYRA PURPUREA.
SECA_RHOCA PREPROTEIN TRANSLOCASE SECA SUBUNIT - RHODOBACTER CAPSULATUS (RHODOPSEUDOMONAS CAPSULATA).
SECA_SPIOL PREPROTEIN TRANSLOCASE SECA SUBUNIT PRECURSOR - SPINACIA OLERACEA (SPINACH).
SECA_STAAU PREPROTEIN TRANSLOCASE SECA SUBUNIT - STAPHYLOCOCCUS AUREUS.
SECA_STACA PREPROTEIN TRANSLOCASE SECA SUBUNIT - STAPHYLOCOCCUS CARNOSUS.
SECA_STRGR PREPROTEIN TRANSLOCASE SECA SUBUNIT - STREPTOMYCES GRISEUS.
SECA_STRLI PREPROTEIN TRANSLOCASE SECA SUBUNIT - STREPTOMYCES LIVIDANS, AND STREPTOMYCES COELICOLOR.
SECA_SYNP7 PREPROTEIN TRANSLOCASE SECA SUBUNIT - SYNECHOCOCCUS SP. (STRAIN PCC 7942) (ANACYSTIS NIDULANS R2).
SECA_SYNY3 PREPROTEIN TRANSLOCASE SECA SUBUNIT - SYNECHOCYSTIS SP. (STRAIN PCC 6803).
SECA_TREPA PREPROTEIN TRANSLOCASE SECA SUBUNIT - TREPONEMA PALLIDUM.

O67718 PREPROTEIN TRANSLOCASE SECA SUBUNIT - AQUIFEX AEOLICUS.

P72016 SECA - MYCOBACTERIUM TUBERCULOSIS.
Scan History
OWL30_1    3  300  NSINGLE    
SPTR37_9f 2 98 NSINGLE
Initial Motifs
Motif 1  width=25
Element Seqn Id St Int Rpt
ILPEAFATVREASKRVLGMRHFDVQ SECA_HAEIN 61 61 -
LLPEAFAVAREAAWRVLDQRPFDVQ MBU66080 62 62 -
ILNEAFAVVREASKRVLGMRHFDVQ SECA_CAUCR 61 61 -
LLVEAFAVAREGAKRALGLYPFKVQ SECA_LISMO 61 61 -
ILPEAFSVVREAGCRVLGLRVFDVQ SECA_PORPU 59 59 -
ILPEAYALVREGSKRVFNMTPYKVQ SECA_STAAU 67 67 -
ILPKAFAITKEAIKRATGLLLFDVQ SECA_ANTSP 55 55 -
LIPEAFAVVREASKRVFGMRHFDVQ SECA_ECOLI 63 63 -
LLVEAFAVVREASRRVTGMFPFKVQ SECA_BACSU 61 61 -

Motif 2 width=15
Element Seqn Id St Int Rpt
EMRTGEGKTLTATLP SECA_HAEIN 99 13 -
EMKTGEGKTLTATLP SECA_LISMO 99 13 -
EMKTGEGKTLVATLA SECA_PORPU 97 13 -
EMRTGEGKTLTATMP SECA_STAAU 105 13 -
EMKTGEGKTLVAMLT SECA_ANTSP 93 13 -
EMKTGEGKTLTCVLP MBU66080 100 13 -
EMRTGEGKTLTATLP SECA_ECOLI 101 13 -
EMKTGEGKTLTSTLP SECA_BACSU 99 13 -
EMRTGEGKTLVATLP SECA_CAUCR 99 13 -

Motif 3 width=11
Element Seqn Id St Int Rpt
YLNALEGKGVH SECA_CAUCR 115 1 -
YLNALSGKGVH SECA_PORPU 113 1 -
YLNALAGNGVH MBU66080 116 1 -
YLNSLFNKGVH SECA_ANTSP 109 1 -
YLNALAGRGVH SECA_STAAU 121 1 -
YLNALTGKGVH SECA_ECOLI 117 1 -
YLNALTGKGVH SECA_BACSU 115 1 -
YLIALEGKGVH SECA_HAEIN 115 1 -
YLNALSGEGVH SECA_LISMO 115 1 -

Motif 4 width=21
Element Seqn Id St Int Rpt
YSCDITYLTNSELGFDYLRDN SECA_ANTSP 162 42 -
YNADITYGTNNEFGFDYLRDN MBU66080 169 42 -
YAADITYGTNNEYGFDYLRDN SECA_ECOLI 170 42 -
YAADITYSTNNELGFDYLRDN SECA_BACSU 168 42 -
YAADITYATNSELGFDYLRDN SECA_HAEIN 168 42 -
YRSDITYGTNNEFGFDYLRDN SECA_CAUCR 168 42 -
YACDITYSTNNELGFDYLRDN SECA_LISMO 168 42 -
YQCDVTYVTNSELGFDYLKDN SECA_PORPU 166 42 -
YAQDITYSTNNELGFDYLRDN SECA_STAAU 174 42 -

Motif 5 width=23
Element Seqn Id St Int Rpt
FTGRTMPGRRFSEGLHQAIEAKE SECA_STAAU 325 130 -
FTGRIMEGRRWSDGLHQAIEAKE SECA_ANTSP 312 129 -
HTGRTMQGRRWSDGLHQAVEAKE SECA_ECOLI 339 148 -
FTGRVLIGRRYNEGIDQAIEAKE MBU66080 319 129 -
FTGRLMKGRRYSEGLHQAIEAKE SECA_BACSU 319 130 -
HTGRTMAGRRWSDGLHQAIEAKE SECA_HAEIN 337 148 -
FTGRMMTGRRLSEGLHQAIEAKE SECA_CAUCR 328 139 -
FTGRIMKGRRFSEGLHQALEAKE SECA_LISMO 319 130 -
FTGRIMSGRRWSDGLHQAIEAKE SECA_PORPU 316 129 -

Motif 6 width=18
Element Seqn Id St Int Rpt
TFQNYFRMYNKLAGMTGT SECA_STAAU 362 14 -
TLQNYFRLYDKLAGMTGT MBU66080 356 14 -
TFQNYFRLYEKLAGMTGT SECA_ECOLI 376 14 -
TFQNYFRMYEKLAGMTGT SECA_BACSU 356 14 -
SYQNYFRLYERLAGMTGT SECA_HAEIN 374 14 -
TIQNYFRLYKKLSGMTGT SECA_CAUCR 365 14 -
TFQNYFRMYKKLAGMTGT SECA_LISMO 356 14 -
TYQNFFLLYPKLSGMTGT SECA_PORPU 353 14 -
TYQNLFLLYEKLSGMTGT SECA_ANTSP 349 14 -

Motif 7 width=14
Element Seqn Id St Int Rpt
PTHRPLRRKEFSDL SECA_PORPU 390 19 -
PTNKLNQRKDLSDL SECA_ANTSP 386 19 -
PTNRPMIRKDLPDL SECA_ECOLI 413 19 -
PTNMPMIREDQSDL MBU66080 393 19 -
PTNRPVVRDDRPDL SECA_BACSU 393 19 -
PTNRPMIRDDRTDV SECA_HAEIN 411 19 -
PTNRTIQRIDDDDE SECA_CAUCR 402 19 -
PTNKVIIRDDRPDL SECA_LISMO 393 19 -
PTNKPVQRNDKSDL SECA_STAAU 399 19 -
Final Motifs
Motif 1  width=25
Element Seqn Id St Int Rpt
DIPQFLAIAREAAERRTGLRPFDVQ SEA2_MYCTU 100 100 -
LLPEAFAVAREAAWRVLNQRHFDVQ SECA_MYCSM 59 59 -
LLVEAFAVVREASRRVTGMFPFKVQ SECA_BACSU 61 61 -
ILPEAFAVVREASKRVLGLRPFDVQ SECA_SPIOL 147 147 -
LLPEAFAVVREASKRVLGLRPFDVQ SECA_PEA 125 125 -
LLPEAFATVREAAKRVLGQRHYDVQ SECA_STRGR 61 61 -
ILPEAFATVREASKRVLGMRHFDVQ SECA_HAEIN 61 61 -
LLPEAFAVMREASKRVLGLRHFDVQ SECA_SYNP7 67 67 -
LLVEAFANCREAARRALGLRAFDTQ SECA_RHOCA 65 65 -
LLPEAFAVAREAAWRVLDQRPFDVQ SEA1_MYCTU 62 62 -
LLPEAFATVREASKRVYGMRHFDVQ O87123 63 63 -
ILNEAFAVVREASKRVLGMRHFDVQ SECA_CAUCR 61 61 -
LLVEAFAVAREGAKRALGLYPFKVQ SECA_LISMO 61 61 -
LLPEAFAVAREAAWRVLDQRPFDVQ SECA_MYCBO 62 62 -
LLPEIYATVREASLRVLGLRHFDVQ SECA_GUITH 59 59 -
LIPEAFAVVREASKRVFGMRHFDVQ SECA_ECOLI 63 63 -
ILPEAFSVVREAGCRVLGLRVFDVQ SECA_PORPU 59 59 -
ILPEAYALVREGSKRVFNMTPYKVQ SECA_STAAU 67 67 -
ILPEAFALVREGAKRVFNMTPYPVQ SECA_STACA 67 67 -
LIVESFALTREASYRTLGLRHFDVQ SECA_ODOSI 57 57 -
FLPQAFALAREAARRVLGERPYDVQ SECA_TREPA 64 64 -
ILPKAFAITKEAIKRATGLLLFDVQ SECA_ANTSP 55 55 -
LLPEAFATVREAAKRVLGQRHYDVQ SECA_STRLI 61 61 -
ILPEAFGLVREASLRILGLRHYDVQ SECA_PAVLU 59 59 -
ILPETFAVASEAAERVLGLNPYDVQ SECA_CYACA 66 66 -
IIARSFSLTREAAFRTIGLRPFDQQ SECA_OLILU 58 58 -
VLPESFAITREASKRILKMCHFDVQ SECA_HELPY 69 69 -
ILERAFTLSREAARRRLKERPYDVQ SECA_BORBU 63 63 -
ILPEAFAVVREAGKRVLGMRHFDVQ SECA_SYNY3 66 66 -
LLPEAYGVVKNVCRRLAGTPVEVSG O84707 62 62 -
VAVAALALIREVVYRETGEFAYRVQ SECA_MYCPN 63 63 -
VCVAALALIREVVYRETGEFAYRVQ SECA_MYCGE 63 63 -
DVPQFLAIVREASERSTGLRPFDVQ SECA_MYCLE 70 70 -

Motif 2 width=15
Element Seqn Id St Int Rpt
EMQTGEGKTLTAVMP O84707 113 26 -
EMRTGEGKTLTATLP SECA_ECOLI 101 13 -
EMKTGEGKTLVATLP SECA_SYNY3 104 13 -
EMRTGEGKTLTATLP O87123 101 13 -
EMKTGEGKTLTAVLP SECA_MYCSM 97 13 -
EMKTGEGKTLTSTLP SECA_BACSU 99 13 -
EMRTGEGKTLVAILP SECA_SPIOL 185 13 -
EMRTGEGKTLVAILP SECA_PEA 163 13 -
EMKTGEGKTLVGTLP SECA_STRGR 99 13 -
EMRTGEGKTLTATLP SECA_HAEIN 99 13 -
EMKTGEGKTLVATLP SECA_SYNP7 105 13 -
EMKTGEGKTLVATFP SECA_RHOCA 103 13 -
EMKTGEGKTLTCVLP SEA1_MYCTU 100 13 -
EMRTGEGKTLVATLP SECA_CAUCR 99 13 -
EMKTGEGKTLTATLP SECA_LISMO 99 13 -
EMKTGEGKTLTCVLP SECA_MYCBO 100 13 -
EMKTGEGKTLVALLP SECA_GUITH 97 13 -
EMKTGEGKTLVATLA SECA_PORPU 97 13 -
EMRTGEGKTLTATMP SECA_STAAU 105 13 -
EMRTGEGKTLTATMP SECA_STACA 105 13 -
EMRTGEGKTLVATLP SECA_ODOSI 95 13 -
EMKTGEGKTLMSVAA SECA_TREPA 102 13 -
EMKTGEGKTLVAMLT SECA_ANTSP 93 13 -
EMKTGEGKTLVGTLP SECA_STRLI 99 13 -
EMKTGEGKTLVAILP SECA_PAVLU 97 13 -
EMKTGEGKSLAASFP SECA_CYACA 104 13 -
EMKTGEGKTLVATLP SECA_OLILU 96 13 -
EMKTGEGKTLVATLA SECA_HELPY 107 13 -
EMKTGEGKTLSSVQA SECA_BORBU 101 13 -
EMMTGEGKTLTIVLA SECA_MYCPN 101 13 -
EMMTGEGKTLTIVLA SECA_MYCGE 101 13 -
EMATGEGKTLAGAIA SECA_MYCLE 108 13 -
EMATGEGKTLAGAIA SEA2_MYCTU 138 13 -

Motif 3 width=11
Element Seqn Id St Int Rpt
YLNALTGKGVH SECA_ECOLI 117 1 -
YLNGLTGKGVH SECA_SYNY3 120 1 -
YLNALAGKGVH O87123 117 1 -
YLNALSGKGVH SECA_MYCSM 113 1 -
YLNALTGKGVH SECA_BACSU 115 1 -
YLNALTGKGVH SECA_SPIOL 201 1 -
YLNALVGKGVH SECA_PEA 179 1 -
YLNALSGKGVH SECA_STRGR 115 1 -
YLIALEGKGVH SECA_HAEIN 115 1 -
YLNALSGKGAH SECA_SYNP7 121 1 -
YLNALAGKGVH SECA_RHOCA 119 1 -
YLNALAGNGVH SEA1_MYCTU 116 1 -
YLNALEGKGVH SECA_CAUCR 115 1 -
YLNALSGEGVH SECA_LISMO 115 1 -
YLNALAGNGVH SECA_MYCBO 116 1 -
YLNALAGFGVH SECA_GUITH 113 1 -
YLNALSGKGVH SECA_PORPU 113 1 -
YLNALAGRGVH SECA_STAAU 121 1 -
YLNALAARGVH SECA_STACA 121 1 -
YLNALTKKGVH SECA_ODOSI 111 1 -
YLNSLSGRGVH SECA_TREPA 118 1 -
YLNSLFNKGVH SECA_ANTSP 109 1 -
YLNALSGEGVH SECA_STRLI 115 1 -
YLNALSGKSVH SECA_PAVLU 113 1 -
YLNALTEKGVH SECA_CYACA 120 1 -
ALNAISGRGVH SECA_OLILU 112 1 -
ALNALKGESVY SECA_HELPY 123 1 -
YLNSLTGDGVI SECA_BORBU 117 1 -
YLNALTGKPVH O84707 129 1 -
YVSALEKRGVH SECA_MYCPN 117 1 -
YVSALEKRGVH SECA_MYCGE 117 1 -
AGYALAGRHVH SECA_MYCLE 124 1 -
AGYALAGRHVH SEA2_MYCTU 154 1 -

Motif 4 width=21
Element Seqn Id St Int Rpt
YQCDVTYVTNSELGFDYLKDN SECA_PORPU 166 42 -
YAADITYGTNNEYGFDYLRDN SECA_ECOLI 170 42 -
YACDITYTTNSELGFDYLRDN SECA_SYNY3 173 42 -
YQADILYGTNNEFGFDYLRDN O87123 169 41 -
YAADITYGTNNEFGFDYLRDN SECA_MYCSM 166 42 -
YAADITYSTNNELGFDYLRDN SECA_BACSU 168 42 -
YLCDITYVTNSELGFDFLRDN SECA_SPIOL 254 42 -
YLCDITYVTNSELGFDFLRDN SECA_PEA 232 42 -
YGCDITYGTNNEFGFDYLRDN SECA_STRGR 168 42 -
YAADITYATNSELGFDYLRDN SECA_HAEIN 168 42 -
YNCDITYATNSELGFDYLRDN SECA_SYNP7 174 42 -
YGADITYATNNELGFDYLRDN SECA_RHOCA 172 42 -
YNADITYGTNNEFGFDYLRDN SEA1_MYCTU 169 42 -
YRSDITYGTNNEFGFDYLRDN SECA_CAUCR 168 42 -
YACDITYSTNNELGFDYLRDN SECA_LISMO 168 42 -
YNADITYGTNNEFGFDYLRDN SECA_MYCBO 169 42 -
YLKDVTYATNSELGFDYLRDN SECA_GUITH 166 42 -
YAQDITYSTNNELGFDYLRDN SECA_STAAU 174 42 -
YNADITYSTNNELGFDYLRDN SECA_STACA 174 42 -
YKADITYVTNNELGFDYLRDN SECA_ODOSI 164 42 -
YACDITYGTNNELGFDYLRDN SECA_TREPA 171 42 -
YSCDITYLTNSELGFDYLRDN SECA_ANTSP 162 42 -
YACDITYGTNNEFGFDYLRDN SECA_STRLI 168 42 -
YKCDVIYTTNSELGFDYLRDN SECA_PAVLU 166 42 -
YLADITYVTNSEIGFDYLRDN SECA_CYACA 173 42 -
YFQDITYITNSELGFDYLRDN SECA_OLILU 165 42 -
YSKDIVYGTNNEFGFDYLRDN SECA_HELPY 177 43 -
YAKDITYVTNNELGFDYLRDN SECA_BORBU 170 42 -
YQCDVVYGTASEFGFDYLRDN O84707 182 42 -
FACDVTYTTNSELGFDYLRDN SECA_MYCPN 170 42 -
FNCDVTYTTNSELGFDYLRDN SECA_MYCGE 170 42 -
YGCDVTYASVNEIGFDVLRDQ SECA_MYCLE 177 42 -
YDRDVTYASVNEIGFDVLRDQ SEA2_MYCTU 207 42 -

Motif 5 width=23
Element Seqn Id St Int Rpt
HTGRTMQGRRWSDGLHQAVEAKE SECA_ECOLI 339 148 -
FTGRIMVGRRWSDGLHQAIEAKE SECA_SYNY3 323 129 -
HTGRTMPGRRWSEGLHQAVEAKE O87123 339 149 -
FTGRVLMGRRYNEGMHQAIEAKE SECA_MYCSM 321 134 -
FTGRLMKGRRYSEGLHQAIEAKE SECA_BACSU 319 130 -
FTGRVMQGRRWSDGLHQAVEAKE SECA_SPIOL 404 129 -
FTGRVMQGRRWSDGLHQAVEAKE SECA_PEA 382 129 -
HTGRILAGRRYNEGMHQAIEAKE SECA_STRGR 331 142 -
HTGRTMAGRRWSDGLHQAIEAKE SECA_HAEIN 337 148 -
FTGRVMPGRRWSDGLHQAVESKE SECA_SYNP7 334 139 -
FTGRMMKGRRLSDGLHQAIEAKE SECA_RHOCA 329 136 -
FTGRVLIGRRYNEGMHQAIEAKE SEA1_MYCTU 320 130 -
FTGRMMTGRRLSEGLHQAIEAKE SECA_CAUCR 328 139 -
FTGRIMKGRRFSEGLHQALEAKE SECA_LISMO 319 130 -
FTGRVLIGRRYNEGIDQAIEAKE SECA_MYCBO 319 129 -
FTGRIMSGRRWSDGLHQAIEAKE SECA_GUITH 316 129 -
FTGRIMSGRRWSDGLHQAIEAKE SECA_PORPU 316 129 -
FTGRTMPGRRFSEGLHQAIEAKE SECA_STAAU 325 130 -
FTGRTMPGRRFSEGLHQAIEAKE SECA_STACA 325 130 -
FTGRIMPDRRWRHGLHQAVEAKE SECA_ODOSI 314 129 -
FTGRILEGRRYSDGLHQAIEAKE SECA_TREPA 346 154 -
FTGRIMEGRRWSDGLHQAIEAKE SECA_ANTSP 312 129 -
HTGRILAGRRYNEGMHQAIEAKE SECA_STRLI 331 142 -
FTGRILKGRRWGDGLHQAIEAKE SECA_PAVLU 314 127 -
FTGRIMPERRWADGLHQSIEAKE SECA_CYACA 323 129 -
FTGRVMPVRRWSNGLHEAIEAKE SECA_OLILU 316 130 -
FTGRLSEGRRFSEGLHQALEAKE SECA_HELPY 328 130 -
FTGRVLTGRRYSDGLHQAIEAKE SECA_BORBU 343 152 -
HTGRPQSGRRFSEGLHQAIEAKE O84707 458 255 -
FTGRILEGRSYSNGLHQAVQAKE SECA_MYCPN 320 129 -
FTGRILEGRSYSNGLQQAVQAKE SECA_MYCGE 320 129 -
SRGRIAQLQRWPDGLQAAVEAKE SECA_MYCLE 328 130 -
SRGRIAQLQRWPDGLQAAVEAKE SEA2_MYCTU 362 134 -

Motif 6 width=18
Element Seqn Id St Int Rpt
TFQNYFRLYEKLAGMTGT SECA_ECOLI 376 14 -
TYQNFFLLYPKLSGMTGT SECA_SYNY3 360 14 -
TFQNYFRLYEKLSGMTGT O87123 376 14 -
TLQNYFRLYDKLSGMTGT SECA_MYCSM 358 14 -
TFQNYFRMYEKLAGMTGT SECA_BACSU 356 14 -
SYQNFFLQFPKLCGMTGT SECA_SPIOL 441 14 -
SYQNFFLQFPKLCGMTGT SECA_PEA 419 14 -
LQQNFFRLYDKLSGMTGT SECA_STRGR 369 15 -
SYQNYFRLYERLAGMTGT SECA_HAEIN 374 14 -
TYQNFFLLYPKLSGMTGT SECA_SYNP7 371 14 -
TFQNYFRLYEKLAGMTGT SECA_RHOCA 366 14 -
TLQNYFRLYDKLAGMTGT SEA1_MYCTU 357 14 -
TIQNYFRLYKKLSGMTGT SECA_CAUCR 365 14 -
TFQNYFRMYKKLAGMTGT SECA_LISMO 356 14 -
TLQNYFRLYDKLAGMTGT SECA_MYCBO 356 14 -
TYQNFFLLYPKLSGMTGT SECA_GUITH 353 14 -
TYQNFFLLYPKLSGMTGT SECA_PORPU 353 14 -
TFQNYFRMYNKLAGMTGT SECA_STAAU 362 14 -
TFQNYFRMYNKLAGMTGT SECA_STACA 362 14 -
TYQNFFLVYPKLSGMTGT SECA_ODOSI 351 14 -
TFQNFFRMYKKLSGMTGT SECA_TREPA 383 14 -
TYQNLFLLYEKLSGMTGT SECA_ANTSP 349 14 -
TLQNFFRLYKRHDHDGKE SECA_STRLI 368 14 -
TYQNFFLFYKKLSGMTGT SECA_PAVLU 351 14 -
TYQNLFLLYLKISGMTGT SECA_CYACA 360 14 -
TYQNFFTLYPKLAGMTGT SECA_OLILU 353 14 -
TFQNYFRMFSKLAGMTGT SECA_HELPY 365 14 -
TFQNLFRMFDKISGMTGT SECA_BORBU 380 14 -
TLQNFFRLYEKLAGMTGT O84707 495 14 -
TYQSFFRLYNRLSAVSGT SECA_MYCPN 357 14 -
TYQSFFRLYNRLAAVSGT SECA_MYCGE 357 14 -
TVQALINRYATVCGMTGT SECA_MYCLE 365 14 -
TVQALINRYATVCGMTGT SEA2_MYCTU 399 14 -

Motif 7 width=14
Element Seqn Id St Int Rpt
PTNRPMIRKDLPDL SECA_ECOLI 413 19 -
PTNRPSSRQDWPDV SECA_SYNY3 397 19 -
PTNKPMIRNDMPDV O87123 413 19 -
PTNKPMVRQDQSDL SECA_MYCSM 395 19 -
PTNRPVVRDDRPDL SECA_BACSU 393 19 -
PTNKPMIRKDESDV SECA_SPIOL 478 19 -
PTNKPMIRKDESDV SECA_PEA 456 19 -
PTNRPMVRADQSDL SECA_STRGR 406 19 -
PTNRPMIRDDRTDV SECA_HAEIN 411 19 -
PTNRVSRRRDQPDV SECA_SYNP7 408 19 -
PTNRPVARKDEHDR SECA_RHOCA 403 19 -
PTNMPMIREDQSDL SEA1_MYCTU 394 19 -
PTNRTIQRIDDDDE SECA_CAUCR 402 19 -
PTNKVIIRDDRPDL SECA_LISMO 393 19 -
PTNMPMIREDQSDL SECA_MYCBO 393 19 -
PTHKIMQRVDFPDL SECA_GUITH 390 19 -
PTHRPLRRKEFSDL SECA_PORPU 390 19 -
PTNKPVQRNDKSDL SECA_STAAU 399 19 -
PTNRPVQREDRPDL SECA_STACA 399 19 -
PTARPNLRQDLPDL SECA_ODOSI 388 19 -
PTNLPVARVDEHDV SECA_TREPA 420 19 -
PTNKLNQRKDLSDL SECA_ANTSP 386 19 -
PTNRPMVRKDQSDL SECA_STRLI 415 29 -
PINKKVNRIDKEDV SECA_PAVLU 388 19 -
PTYKSMIRKDLPDL SECA_CYACA 397 19 -
PTSKKFQRKDLPDK SECA_OLILU 390 19 -
PTNLAIKRKDLNDL SECA_HELPY 402 19 -
PTNRLLARIDEDDT SECA_BORBU 417 19 -
PTFKPCLRIDHNDA O84707 532 19 -
PTNRPNIRKDRADS SECA_MYCPN 394 19 -
PTNRPNIRKDRSDS SECA_MYCGE 394 19 -
PPNTPNIRDDASDR SECA_MYCLE 402 19 -
PPNKPNIREDEADR SEA2_MYCTU 436 19 -