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PR00688

Identifier
XYLOSISMRASE  [View Relations]  [View Alignment]  
Accession
PR00688
No. of Motifs
9
Creation Date
04-APR-1997  (UPDATE 07-JUN-1999)
Title
Xylose isomerase signature
Database References

PROSITE; PS00172 XYLOSE_ISOMERASE_1; PS00173 XYLOSE_ISOMERASE_2
PFAM; PF00259 Xylose_isom
INTERPRO; IPR001998
PDB; 1XIS
SCOP; 1XIS
CATH; 1XIS
Literature References
1. DAUTER, Z., DAUTER, M., HEMKER, J., WITZEL, H. AND WILSON, K.S.
Crystallization and preliminary-analysis of glucose-isomerase from
Streptomyces albus.
FEBS LETT. 247 1-8 (1989).
 
2. HENRICK, K., COLLYER, C.A. AND BLOW, D.M.
Structures of D-xylose isomerase from Arthrobacter strain-b3728 containing
the inhibitors xylitol and D-sorbitol at 2.5A and 2.3A resolution, res..
J.MOL.BIOL. 208 129-157 (1989).
 
3. VANGRYSPERRE, W., AMPE, C., KERSTERS-HILDERSON, H. AND TEMPST, P. 
Single active-site histidine in D-xylose isomerase from Streptomyces
violaceoruber - identification by chemical derivatization and
peptide-mapping.
BIOCHEM.J. 263 195-199 (1989).

Documentation
Xylose isomerase is an enzyme found in microorganisms that catalyses the
interconversion of D-xylose to D-xylulose [1]; it can also isomerise
D-ribose to D-ribulose and D-glucose to D-fructose. The enzyme is a homo-
tetramer, which is stabilised by cobalt, and requires magnesium for its
catalytic activity. Each subunit contains 2 domains: the core domain is a 
parallel alpha-beta barrel; the C-terminal domain is a loop structure
consisting of 5 helices and is involved in intermolecular contacts between
adjacent subunits [2]. The active site lies in a deep pocket near the
C-terminal ends of the strands of the barrel domain and includes residues
from a second subunit. The tetramer is effectively a dimer of "active"
dimers, the active sites being composed of residues from both subunits [2].
 
XYLOSISMRASE is a 9-element fingerprint that provides a signature for 
xylose isomerases. The fingerprint was derived from an initial alignment
of 18 sequences: the motifs were drawn from conserved regions spanning the
full alignment length - motif 1 includes the region encoded by PROSITE 
pattern  XYLOSE_ISOMERASE_1 (PS00172), which includes a conserved His
residue known to be involved in the catalytic mechanism of the enzyme [3];
and motif 6 includes the short conserved region encoded by PROSITE pattern
XYLOSE_ISOMERASE_2 (PS00173), which contains both a glutamic acid residue
that binds magnesium and a lysine involved with the enzyme catalytic
activity [2]. Two iterations on OWL29.2 were required to reach convergence,
at which point a true set comprising 35 sequences was identified. A single
partial match was also found, ECDXI11, a xylose isomerase fragment from
E.coli.
 
An update on SPTR37_9f identified a true set of 32 sequences.
Summary Information
32 codes involving  9 elements
0 codes involving 8 elements
0 codes involving 7 elements
0 codes involving 6 elements
0 codes involving 5 elements
0 codes involving 4 elements
0 codes involving 3 elements
0 codes involving 2 elements
Composite Feature Index
9323232323232323232
8000000000
7000000000
6000000000
5000000000
4000000000
3000000000
2000000000
123456789
True Positives
O08325        O82845        P77832        P77995        
P94491 Q40081 Q40082 XYLA_ACTMI
XYLA_AMPSP XYLA_ARTS7 XYLA_BACSP XYLA_BACST
XYLA_BACSU XYLA_CLOTS XYLA_ECOLI XYLA_HAEIN
XYLA_KLEAE XYLA_LACBR XYLA_LACPE XYLA_STAXY
XYLA_STRAL XYLA_STRDI XYLA_STRMR XYLA_STROL
XYLA_STRRO XYLA_STRRU XYLA_STRVO XYLA_THEET
XYLA_THENE XYLA_THESA XYLA_THETH XYLA_THETU
Sequence Titles
O08325      XYLOSE ISOMERASE (EC 5.3.1.5) - BACILLUS MEGATERIUM. 
O82845 XYLOSE ISOMERASE (EC 5.3.1.5) - TETRAGENOCOCCUS HALOPHILUS (PEDIOCOCCUS HALOPHILUS).
P77832 XYLOSE ISOMERASE (EC 5.3.1.5) - BACILLUS LICHENIFORMIS.
P77995 XYLOSE ISOMERASE (EC 5.3.1.5) - THERMOANAEROBACTERIUM SP.
P94491 XYLOSE ISOMERASE (EC 5.3.1.5) - BACILLUS SUBTILIS.
Q40081 XYLOSE ISOMERASE (EC 5.3.1.5) - HORDEUM VULGARE (BARLEY).
Q40082 XYLOSE ISOMERASE (EC 5.3.1.5) - HORDEUM VULGARE (BARLEY).
XYLA_ACTMI XYLOSE ISOMERASE (EC 5.3.1.5) - ACTINOPLANES MISSOURIENSIS.
XYLA_AMPSP XYLOSE ISOMERASE (EC 5.3.1.5) - AMPULLARIELLA SP. (STRAIN 3876).
XYLA_ARTS7 XYLOSE ISOMERASE (EC 5.3.1.5) - ARTHROBACTER SP. (STRAIN NRRL B3728).
XYLA_BACSP XYLOSE ISOMERASE (EC 5.3.1.5) - BACILLUS SP. (STRAIN LW2).
XYLA_BACST XYLOSE ISOMERASE (EC 5.3.1.5) - BACILLUS STEAROTHERMOPHILUS.
XYLA_BACSU XYLOSE ISOMERASE (EC 5.3.1.5) - BACILLUS SUBTILIS.
XYLA_CLOTS XYLOSE ISOMERASE (EC 5.3.1.5) - CLOSTRIDIUM THERMOSACCHAROLYTICUM (THERMOANAEROBACTERIUM THERMOSACCHAROLYTICUM).
XYLA_ECOLI XYLOSE ISOMERASE (EC 5.3.1.5) - ESCHERICHIA COLI.
XYLA_HAEIN XYLOSE ISOMERASE (EC 5.3.1.5) - HAEMOPHILUS INFLUENZAE.
XYLA_KLEAE XYLOSE ISOMERASE (EC 5.3.1.5) - KLEBSIELLA AEROGENES.
XYLA_LACBR XYLOSE ISOMERASE (EC 5.3.1.5) - LACTOBACILLUS BREVIS.
XYLA_LACPE XYLOSE ISOMERASE (EC 5.3.1.5) - LACTOBACILLUS PENTOSUS.
XYLA_STAXY XYLOSE ISOMERASE (EC 5.3.1.5) - STAPHYLOCOCCUS XYLOSUS.
XYLA_STRAL XYLOSE ISOMERASE (EC 5.3.1.5) - STREPTOMYCES ALBUS G.
XYLA_STRDI XYLOSE ISOMERASE (EC 5.3.1.5) - STREPTOMYCES DIASTATICUS.
XYLA_STRMR XYLOSE ISOMERASE (EC 5.3.1.5) - STREPTOMYCES MURINUS.
XYLA_STROL XYLOSE ISOMERASE (EC 5.3.1.5) - STREPTOMYCES OLIVOCHROMOGENES.
XYLA_STRRO XYLOSE ISOMERASE (EC 5.3.1.5) - STREPTOMYCES ROCHEI (STREPTOMYCES PARVULLUS).
XYLA_STRRU XYLOSE ISOMERASE (EC 5.3.1.5) - STREPTOMYCES RUBIGINOSUS.
XYLA_STRVO XYLOSE ISOMERASE (EC 5.3.1.5) - STREPTOMYCES VIOLACEONIGER.
XYLA_THEET XYLOSE ISOMERASE (EC 5.3.1.5) - THERMOANAEROBACTER ETHANOLICUS (CLOSTRIDIUM THERMOHYDROSULFURICUM).
XYLA_THENE XYLOSE ISOMERASE (EC 5.3.1.5) - THERMOTOGA NEAPOLITANA.
XYLA_THESA XYLOSE ISOMERASE (EC 5.3.1.5) - THERMOANAEROBACTER SACCHAROLYTICUM.
XYLA_THETH XYLOSE ISOMERASE (EC 5.3.1.5) - THERMUS AQUATICUS (SUBSP. THERMOPHILUS).
XYLA_THETU XYLOSE ISOMERASE (EC 5.3.1.5) - THERMOANAEROBACTER THERMOSULFUROGENES (CLOSTRIDIUM THERMOSULFUROGENES).
Scan History
OWL29_2    2  100  NSINGLE    
SPTR37_9f 2 93 NSINGLE
Initial Motifs
Motif 1  width=23
Element Seqn Id St Int Rpt
KLNVPYYCFHDVDVSPEGASLKE XYLA_KLEAE 92 92 -
ELGAYGVTFHDDDLIPFGSSDTE XYLA_STRVO 44 44 -
EIGAYGITFHDDDLVPFGSDAQT XYLA_ACTMI 44 44 -
ELGAYGITFHDNDLIPFDATEAE XYLA_ARTS7 44 44 -
ELGAYGVNLHDEDLIPRGTPPQE XYLA_THETH 44 44 -
ELGAHGVTFHDDDLIPFGSSDSE NRL_7XIA 45 45 -
EIGAYGVTFHDDDLVPFGADAAT XYLA_AMPSP 45 45 -
ELGAYGVTFHDDDLIPFGSSDTE XYLA_STRMR 45 45 -
ELGAHGVTFHDDDLIPFGATDSE XYLA_STRDI 45 45 -
KLNIPFFCFHDVDIAPEGETLKE XYLA_BACST 90 90 -
KINAPYFCFHDRDIAPEGDTLRE XYLA_THETU 92 92 -
KINAPFFCFHDRDIAPEGDTLRE XYLA_CLOTS 92 92 -
KLDVPFFCFHDRDIAPEGETLRE XYLA_THEET 91 91 -
KLDAPFFAFHDRDIAPEGSTLKE XYLA_BACSU 98 98 -
KTRIDYFCFHDVDISPEGASLKE XYLA_STAXY 89 89 -
KLGVDYLCFHDRDLAPEGDTLRE XYLA_LACPE 94 94 -
KLHVPFYCFHDVDVSPEGASLKE XYLA_ECOLI 92 92 -
KLGVPYYCFHDVDIAPEGNSVRE XYLA_HAEIN 92 92 -

Motif 2 width=21
Element Seqn Id St Int Rpt
SKTKVLWGTANLFSNPRFVHG XYLA_THETU 133 18 -
TGMKVPMATTNLFTHPVFKDG NRL_7XIA 82 14 -
SKTKLLWNTANLFTHPRFVHG XYLA_BACST 131 18 -
SKTKVLWGTANLFSNPRFVHG XYLA_CLOTS 133 18 -
SKTKVLWGTANLFSNPRFVHG XYLA_THEET 132 18 -
SNVKLLWNTANMFTNPRFVHG XYLA_BACSU 139 18 -
TGKKLLWNTTNNFTHERFVHG XYLA_STAXY 130 18 -
TGMKVLWNTSNMFTNPRFVAG XYLA_LACPE 135 18 -
SGVKLLWGTANCFTNPRYGAG XYLA_ECOLI 133 18 -
TGVKLLWGTANCFTNPRYMSG XYLA_HAEIN 133 18 -
SGVKLLWGTANCFTNPRYGAG XYLA_KLEAE 133 18 -
TGMTVPMATTNLFTHPVFKDG XYLA_STRVO 81 14 -
TGMKVPMATTNLFTHPVFKDG XYLA_STRDI 82 14 -
TGMTVPMATTNLFTHPVFKDG XYLA_STRMR 82 14 -
TGLIVPMVTTNLFTHPVFKDG XYLA_AMPSP 82 14 -
TGLKVPMVTTNLFSHPVFKDG XYLA_ARTS7 81 14 -
TGLIVPMVTTNLFTHPVFKDG XYLA_ACTMI 81 14 -
TGLKVPMVTANLFSDPAFKDG XYLA_THETH 81 14 -

Motif 3 width=20
Element Seqn Id St Int Rpt
TANDRDVRRYAVRKTIRNID XYLA_STRDI 105 2 -
TANDRDVRRYALRKTIGNID XYLA_STRMR 105 2 -
TSCNADVFAYAAAKVKKGLE XYLA_BACST 154 2 -
TSCNADVFAYSAAQVKKALE XYLA_THETU 156 2 -
TSCNADVFAYSAAQVKKALE XYLA_CLOTS 156 2 -
TSCNADVFAYAAAQVKKALE XYLA_THEET 155 2 -
TANDRDVRRYALRKTIRNID NRL_7XIA 105 2 -
TSCNADVFAYAAAQVKKGLE XYLA_BACSU 162 2 -
TSNDRSVRRYAIRKVLRQMD XYLA_AMPSP 105 2 -
TSSNAEVFAYAAAKVKKSLE XYLA_STAXY 153 2 -
TSNDRSIRRFALAKVLHNID XYLA_ARTS7 104 2 -
TSNDRSVRRYAIRKVLRQMD XYLA_ACTMI 104 2 -
TSPDPWVRAYALRKSLETMD XYLA_THETH 104 2 -
TSPDADVFAYAAAQLKHSLE XYLA_LACPE 158 2 -
TNPDPEVFSWAATQVVTAME XYLA_ECOLI 156 2 -
TNPNPEVFAWAATQVFNAMN XYLA_HAEIN 156 2 -
TNPDPEVFSWAATQVVTAMN XYLA_KLEAE 156 2 -
TANDRDVRRYALRKTIRNID XYLA_STRVO 104 2 -

Motif 4 width=22
Element Seqn Id St Int Rpt
LGAENYVFWGGREGYETLLNTD XYLA_BACSU 186 4 -
VGAENYVFWGGREGYESLWNTN XYLA_LACPE 182 4 -
LGGENYVLWGGREGYETLLNTD XYLA_ECOLI 180 4 -
LGGENYVLWGGREGYETLLNTD XYLA_HAEIN 180 4 -
LGGENYVLWGGREGYETLLNTD XYLA_KLEAE 180 4 -
LGAKTYVAWGGREGAESGGAKD XYLA_STRVO 128 4 -
LGAQTYVAWGGREGAESGAAKD XYLA_STRDI 129 4 -
MGAETFVMWGGREGSEYDGSKD XYLA_ARTS7 128 4 -
LGAKTLVLWGGREGAEYDSAKD XYLA_ACTMI 128 4 -
LGAEIYVVWPGREGAEVEATGK XYLA_THETH 128 4 -
LGAETYVAWGGREGAESGGAKD NRL_7XIA 129 4 -
LGAKTLVLWGGREGAEYDSAKD XYLA_AMPSP 129 4 -
LGAKTYVAWGGREGAESGGAKD XYLA_STRMR 129 4 -
LGAENYVFWGGREGYETLLNTD XYLA_BACST 178 4 -
LGGENYVFWGGREGYETLLNTD XYLA_THETU 180 4 -
LGGQNYVFWGGREGYETLLNTD XYLA_CLOTS 180 4 -
LGGQNYVFWGGREGYETLLNTD XYLA_THEET 179 4 -
LGSENFVFWGGREGYESLLNTN XYLA_STAXY 177 4 -

Motif 5 width=20
Element Seqn Id St Int Rpt
DNLARFMHMAVDYAKEIEYT XYLA_BACSU 213 5 -
DRMKEAFDLLGEYVTSQGYD NRL_7XIA 156 5 -
DNLARFLHMAVDYAKEIGFD XYLA_BACST 205 5 -
DNFARFLHMAVDYAKEIGFE XYLA_THETU 207 5 -
DNFARFLHMAVDYAKEIGFE XYLA_CLOTS 207 5 -
DNLARFLHMAVEYAQEIGFE XYLA_THEET 206 5 -
DNLATFFKMAKSYADEIGYT XYLA_STAXY 204 5 -
EHAAKFFHMAKDYANEIGFD XYLA_LACPE 209 5 -
EQLGRFMQMVVEHKHKIGFQ XYLA_ECOLI 207 5 -
EQIGRFMQMVVEHKHKIGFK XYLA_HAEIN 207 5 -
EQLGRLLQLVVEHKHKIGFK XYLA_KLEAE 207 5 -
DRMKEAFDLLGEYVTAQGYD XYLA_STRVO 155 5 -
DRMKEAFDLLGEYVTSQGYD XYLA_STRDI 156 5 -
DRMKEAFDLLGEYVTAQGYD XYLA_STRMR 156 5 -
DRYREALNLLAQYSEDQGYG XYLA_AMPSP 156 5 -
DRMREGVDTAAGYIKDKGYN XYLA_ARTS7 155 5 -
DRYREALNLLAQYSEDRGYG XYLA_ACTMI 155 5 -
DWVREALNFMAAYAEDQGYG XYLA_THETH 155 5 -

Motif 6 width=25
Element Seqn Id St Int Rpt
IALEPKPNEPRGDIFLPTVGHGLAF XYLA_ARTS7 177 2 -
FAIEPKPNEPRGDILLPTVGHALAF NRL_7XIA 178 2 -
FALEPKPNEPRGDIYFATVGSMLAF XYLA_THETH 177 2 -
FAIEPKPNEPRGDILLPTAGHAIAF XYLA_ACTMI 177 2 -
FLIEPKPKEPTKHQYDFDVATRLAF XYLA_BACST 227 2 -
FLIEPKPKEPTKHQYDFDVANVLAF XYLA_THETU 229 2 -
FLIEPKPKEPTKHQYDFDVANVLAF XYLA_CLOTS 229 2 -
FLIEPKPKEPTKHQYDFDAASVHAF XYLA_THEET 228 2 -
FLIEPKPKEPTTHQYDTDAATTIAF XYLA_BACSU 235 2 -
FLIEPKPKEPTTHQYDTDVATAHAF XYLA_STAXY 226 2 -
MLLEPKPKEPSTHQYDFDAATTIAF XYLA_LACPE 231 2 -
LLIEPKPQEPTKHQYDYDAATVYGF XYLA_ECOLI 229 2 -
LLIEPKPQEPTKHQYDYDVATVYGF XYLA_HAEIN 229 2 -
LLIEPKPQEPTKHQYDYDASTVYGF XYLA_KLEAE 229 2 -
FAIEPKPNEPRGDILLPTVGHALAF XYLA_STRVO 177 2 -
FAIEPKPNEPRGDILLPTIGHALAF XYLA_STRDI 178 2 -
FAIEPKPNEPRGDILLPTVGHALAF XYLA_STRMR 178 2 -
FAIEPKPNEPRGDILLPTAGHAIAF XYLA_AMPSP 178 2 -

Motif 7 width=28
Element Seqn Id St Int Rpt
HANLAGHTYQHEIRVAREANLLGSLDAN XYLA_LACPE 273 17 -
HATLAGHTFEHELRVARIHGMLGSVDAN XYLA_BACST 269 17 -
HATLAFHDFQHELRYARINGVLGSIDAN XYLA_THETU 271 17 -
HATLAAHDFQHELRYARINGVLGSIDAN XYLA_CLOTS 271 17 -
HATLAGHDFQHELRYARINNMLGSIDAN XYLA_THEET 270 17 -
HATLAGHTFEHELRMARVHGLLGSVDAN XYLA_BACSU 277 17 -
HATLAGHTFQHELRYARDNNMLGSVDAN XYLA_STAXY 268 17 -
HATLAGHSFHHEIATAIALGLFGSVDAN XYLA_ECOLI 271 17 -
HATLAGHTFQHEIATACALDIFGSIDAN XYLA_HAEIN 271 17 -
HATLAGHSFHHEIATAIALGLFGSVDAN XYLA_KLEAE 271 17 -
HEQMAGLNFPHGIAQALWAGKLFHIDLN XYLA_STRVO 219 17 -
HEQMAGLNFPHGIAQALWAGKLFHIDLN XYLA_STRDI 220 17 -
HEQMAGLNFPHGIAQALWAGKLFHIDLN XYLA_STRMR 220 17 -
HEQMSNLNFTQGIAQALWHKKLFHIDLN XYLA_AMPSP 220 17 -
HEQMAGLNFTHGIAQALWAEKLFHIDLN XYLA_ARTS7 219 17 -
HEQMSNLNFTQGIAQALWHKKLFHIDLN XYLA_ACTMI 219 17 -
HETMAGLNFVHAVAQALDAGKLFHIDLN XYLA_THETH 219 17 -
HEQMAGLNFPHGIAQALWAGKLFHIDLN NRL_7XIA 220 17 -

Motif 8 width=12
Element Seqn Id St Int Rpt
DQRMSRFDQDLR XYLA_THETH 247 0 -
GDMLLGWDTDEF XYLA_BACST 298 1 -
GDMLLGWDTDQF XYLA_THETU 300 1 -
GDMLLGWDTDQF XYLA_CLOTS 300 1 -
GDMLLGWDTDQY XYLA_THEET 299 1 -
GQNGIKYDQDLR NRL_7XIA 248 0 -
GHPLLGWDTDEF XYLA_BACSU 306 1 -
GHPLLGWDTDES XYLA_STAXY 297 1 -
GDKLIGWDIDEF XYLA_LACPE 302 1 -
GDAQLGWDTDQF XYLA_ECOLI 300 1 -
GDPQLGWDTDQF XYLA_HAEIN 300 1 -
GDPQLGWDTDQF XYLA_KLEAE 300 1 -
GQSGIKYDQDLR XYLA_STRVO 247 0 -
GQSGIKYDQDLR XYLA_STRDI 248 0 -
GQSGIKYDQDLR XYLA_STRMR 248 0 -
GQHGPKFDQDLV XYLA_AMPSP 248 0 -
GQRGIKYDQDLV XYLA_ARTS7 247 0 -
GQHGPKFDQDLV XYLA_ACTMI 247 0 -

Motif 9 width=12
Element Seqn Id St Int Rpt
TGGLNFDAKVRR XYLA_KLEAE 333 21 -
EGPRHFDFKPPR XYLA_STRDI 281 21 -
QGPRHFDAHALR XYLA_THETH 280 21 -
DGPRHFDYKPSR XYLA_ACTMI 285 26 -
RGGLNFDAKVRR XYLA_BACST 331 21 -
SGPRHFDFKPPR NRL_7XIA 281 21 -
EGPRHFDFKPPR XYLA_STRMR 281 21 -
KGGLNFDAKVRR XYLA_THETU 333 21 -
KGGLNFDAKVRR XYLA_CLOTS 333 21 -
DGPRHFDYKPSR XYLA_AMPSP 286 26 -
KGGLNFDAKVRR XYLA_THEET 332 21 -
SGGLNFDAKVRR XYLA_BACSU 339 21 -
TGPRHFDYKPSR XYLA_ARTS7 286 27 -
PGGLNFDAKPRR XYLA_STAXY 329 20 -
RGGLNFDAKPRR XYLA_LACPE 336 22 -
TGGLNFDAKVRR XYLA_ECOLI 333 21 -
TGGFNFDAKIRR XYLA_HAEIN 333 21 -
EGPRHFDFKPPR XYLA_STRVO 280 21 -
Final Motifs
Motif 1  width=23
Element Seqn Id St Int Rpt
KLNIPFFCFHDVDIAPEGETLKE XYLA_BACSP 90 90 -
KLNIPFFCFHDVDIAPEGETLKE XYLA_BACST 90 90 -
KINAPYFCFHDRDIAPEGDTLRE XYLA_THETU 92 92 -
KINAPFFCFHDRDIAPEGDTLRE XYLA_THESA 92 92 -
KINAPFFCFHDRDIAPEGDTLRE XYLA_CLOTS 92 92 -
KLDAPFFAFHDRDIAPEGSTLKE P94491 98 98 -
KLDVPFFCFHDRDIAPEGETLRE XYLA_THEET 91 91 -
KLDAPFFAFHDRDIAPEGSTLKE XYLA_BACSU 98 98 -
TLNVPFFAFHDRDIAPEGSTLQE O08325 98 98 -
KINAPFFCFHDRDIAPEGDTLRK P77995 92 92 -
KLNIEYFCFHDRDIAPEGKTLRE XYLA_THENE 92 92 -
KLGVPYFCFHDVDIVDEGATLRE P77832 90 90 -
KLGAEYFCFHDVDIAPQGDSLKE O82845 90 90 -
KTRIDYFCFHDVDISPEGASLKE XYLA_STAXY 89 89 -
KLGVDYLCFHDRDLAPEGDTLRE XYLA_LACPE 94 94 -
KLGVDYLCFHDRDLAPEGDTLRE XYLA_LACBR 94 94 -
KLHVPFYCFHDVDVSPEGASLKE XYLA_ECOLI 92 92 -
KLGVPYYCFHDVDIAPEGNSVRE XYLA_HAEIN 92 92 -
KLNVPYYCFHDVDVSPEGASLKE XYLA_KLEAE 92 92 -
KLGVERWCFHDRDIAPDGKTLAE Q40081 135 135 -
KLGVERWCFHDRDIAPDGKTLAE Q40082 135 135 -
ELGAHGVTFHDDDLIPFGSSDSE XYLA_STRAL 44 44 -
ELGAHGVTFHDDDLIPFGSSDSE XYLA_STRRU 44 44 -
ELGAYGVTFHDDDLIPFGSSDTE XYLA_STRVO 44 44 -
ELGAHGVTFHDDDLIPFGATDSE XYLA_STRDI 45 45 -
ELGAHGVTFHDDDLIPFGSSDTE XYLA_STROL 44 44 -
ELGAYGVTFHDDDLIPFGSSDTE XYLA_STRMR 45 45 -
ELGAYGVTFHDDDLNPFGSSDTE XYLA_STRRO 44 44 -
EIGAYGVTFHDDDLVPFGADAAT XYLA_AMPSP 45 45 -
ELGAYGITFHDNDLIPFDATEAE XYLA_ARTS7 44 44 -
EIGAYGITFHDDDLVPFGSDAQT XYLA_ACTMI 44 44 -
ELGAYGVNLHDEDLIPRGTPPQE XYLA_THETH 44 44 -

Motif 2 width=21
Element Seqn Id St Int Rpt
SKTKLLWNTANLFTHPRFVHG XYLA_BACSP 131 18 -
SKTKLLWNTANLFTHPRFVHG XYLA_BACST 131 18 -
SKTKVLWGTANLFSNPRFVHG XYLA_THETU 133 18 -
SKTKVLWGTANLFSNPRFVHG XYLA_THESA 133 18 -
SKTKVLWGTANLFSNPRFVHG XYLA_CLOTS 133 18 -
SGVKLLWNTANMFTNPRFVHG P94491 139 18 -
SKTKVLWGTANLFSNPRFVHG XYLA_THEET 132 18 -
SNVKLLWNTANMFTNPRFVHG XYLA_BACSU 139 18 -
SNVKLLWNTANMFTNPRFVHG O08325 139 18 -
SKTKVLWGTANLFSNPRFVHG P77995 133 18 -
SNVKLLWGTANLFSHPRYMHG XYLA_THENE 133 18 -
SHVQLLWNTANMFTHPRYVHG P77832 131 18 -
TGVKLLWNTANMFTHPTFVNG O82845 131 18 -
TGKKLLWNTTNNFTHERFVHG XYLA_STAXY 130 18 -
TGMKVLWNTSNMFTNPRFVAG XYLA_LACPE 135 18 -
SGMKVLWNTSNMFTNPRFVEG XYLA_LACBR 135 18 -
SGVKLLWGTANCFTNPRYGAG XYLA_ECOLI 133 18 -
TGVKLLWGTANCFTNPRYMSG XYLA_HAEIN 133 18 -
SGVKLLWGTANCFTNPRYGAG XYLA_KLEAE 133 18 -
TNIKPLWGTAQLFMHPRYMHG Q40081 176 18 -
TNIKPLWGTAQLFMHPRYMHG Q40082 176 18 -
TGMKVPMATTNLFTHPVFKDG XYLA_STRAL 81 14 -
TGMKVPMATTNLFTHPVFKDG XYLA_STRRU 81 14 -
TGMTVPMATTNLFTHPVFKDG XYLA_STRVO 81 14 -
TGMKVPMATTNLFTHPVFKDG XYLA_STRDI 82 14 -
TGMTVPMATTNLFTHPVFKDG XYLA_STROL 81 14 -
TGMTVPMATTNLFTHPVFKDG XYLA_STRMR 82 14 -
TGMTVPMATTNLFTHPVFKDR XYLA_STRRO 81 14 -
TGLIVPMVTTNLFTHPVFKDG XYLA_AMPSP 82 14 -
TGLKVPMVTTNLFSHPVFKDG XYLA_ARTS7 81 14 -
TGLIVPMVTTNLFTHPVFKDG XYLA_ACTMI 81 14 -
TGLKVPMVTANLFSDPAFKDG XYLA_THETH 81 14 -

Motif 3 width=20
Element Seqn Id St Int Rpt
TSCNADVFAYAAAKVKKGLE XYLA_BACSP 154 2 -
TSCNADVFAYAAAKVKKGLE XYLA_BACST 154 2 -
TSCNADVFAYSAAQVKKALE XYLA_THETU 156 2 -
TSCNADVFAYSAAQVKKALE XYLA_THESA 156 2 -
TSCNADVFAYSAAQVKKALE XYLA_CLOTS 156 2 -
TSCNADVFAYAAAQVKKGLE P94491 162 2 -
TSCNADVFAYAAAQVKKALE XYLA_THEET 155 2 -
TSCNADVFAYAAAQVKKGLE XYLA_BACSU 162 2 -
TSCNADVFRYAAAQVKKGLE O08325 162 2 -
TSCNADVFAYSAAQVKKALE P77995 156 2 -
TTCSADVFAYAAAQVKKALE XYLA_THENE 156 2 -
TSCNADVYAYAAAKVKKGLD P77832 154 2 -
TTNNADVYSMAAAQVKKGLD O82845 154 2 -
TSSNAEVFAYAAAKVKKSLE XYLA_STAXY 153 2 -
TSPDADVFAYAAAQLKHSLE XYLA_LACPE 158 2 -
TSPYADVFAYSAAQLKHSLE XYLA_LACBR 158 2 -
TNPDPEVFSWAATQVVTAME XYLA_ECOLI 156 2 -
TNPNPEVFAWAATQVFNAMN XYLA_HAEIN 156 2 -
TNPDPEVFSWAATQVVTAMN XYLA_KLEAE 156 2 -
TSPEVKVYAYAAAQVKKALE Q40081 199 2 -
TSPEVKVYAYAAAQVKKALE Q40082 199 2 -
TANDRDVRRYALRKTIRNID XYLA_STRAL 104 2 -
TANDRDVRRYALRKTIRNID XYLA_STRRU 104 2 -
TANDRDVRRYALRKTIRNID XYLA_STRVO 104 2 -
TANDRDVRRYAVRKTIRNID XYLA_STRDI 105 2 -
TANDRDVRRYALRKTIRNID XYLA_STROL 104 2 -
TANDRDVRRYALRKTIGNID XYLA_STRMR 105 2 -
TANDRDVRAYAVRKTIRNID XYLA_STRRO 103 1 -
TSNDRSVRRYAIRKVLRQMD XYLA_AMPSP 105 2 -
TSNDRSIRRFALAKVLHNID XYLA_ARTS7 104 2 -
TSNDRSVRRYAIRKVLRQMD XYLA_ACTMI 104 2 -
TSPDPWVRAYALRKSLETMD XYLA_THETH 104 2 -

Motif 4 width=22
Element Seqn Id St Int Rpt
LGAENYVFWGGREGYETLLNTD XYLA_BACSP 178 4 -
LGAENYVFWGGREGYETLLNTD XYLA_BACST 178 4 -
LGGENYVFWGGREGYETLLNTD XYLA_THETU 180 4 -
LGRENYVFWGGREGYETLLNTD XYLA_THESA 180 4 -
LGGQNYVFWGGREGYETLLNTD XYLA_CLOTS 180 4 -
LGAENYVFWGGREGYETLLNTD P94491 186 4 -
LGGQNYVFWGGREGYETLLNTD XYLA_THEET 179 4 -
LGAENYVFWGGREGYETLLNTD XYLA_BACSU 186 4 -
LGAENYVFWGGREGYETLLNTN O08325 186 4 -
LGGENYVFWGGREGYETLLNTD P77995 180 4 -
LGGEGYVFWGGREGYETLLNTD XYLA_THENE 180 4 -
LGAENYVFWGGREGYETLLNTD P77832 178 4 -
LNGENYVFWGGREGYENLLNTD O82845 178 4 -
LGSENFVFWGGREGYESLLNTN XYLA_STAXY 177 4 -
VGAENYVFWGGREGYESLWNTN XYLA_LACPE 182 4 -
VGSENYVFWGGREGYESLWNTN XYLA_LACBR 182 4 -
LGGENYVLWGGREGYETLLNTD XYLA_ECOLI 180 4 -
LGGENYVLWGGREGYETLLNTD XYLA_HAEIN 180 4 -
LGGENYVLWGGREGYETLLNTD XYLA_KLEAE 180 4 -
LGGENYVFWGGREGYQTLLNTD Q40081 223 4 -
LGGENYVFWGGREGYQTLLNTD Q40082 223 4 -
LGAETYVAWGGREGAESGGAKD XYLA_STRAL 128 4 -
LGAETYVAWGGREGAESGGAKD XYLA_STRRU 128 4 -
LGAKTYVAWGGREGAESGGAKD XYLA_STRVO 128 4 -
LGAQTYVAWGGREGAESGAAKD XYLA_STRDI 129 4 -
LGAKTYVAWGGREGAESGAAKD XYLA_STROL 128 4 -
LGAKTYVAWGGREGAESGGAKD XYLA_STRMR 129 4 -
LGAKTYVAWGGREGAESGGAKD XYLA_STRRO 127 4 -
LGAKTLVLWGGREGAEYDSAKD XYLA_AMPSP 129 4 -
MGAETFVMWGGREGSEYDGSKD XYLA_ARTS7 128 4 -
LGAKTLVLWGGREGAEYDSAKD XYLA_ACTMI 128 4 -
LGAEIYVVWPGREGAEVEATGK XYLA_THETH 128 4 -

Motif 5 width=20
Element Seqn Id St Int Rpt
DNLARFLHMAVDYAKEIGFD XYLA_BACSP 205 5 -
DNLARFLHMAVDYAKEIGFD XYLA_BACST 205 5 -
DNFARFLHMAVDYAKEIGFE XYLA_THETU 207 5 -
DNFARFLHMAVDYAKEIGFE XYLA_THESA 207 5 -
DNFARFLHMAVDYAKEIGFE XYLA_CLOTS 207 5 -
DDLARFMHMAVDYAKEIGYT P94491 213 5 -
DNLARFLHMAVEYAQEIGFE XYLA_THEET 206 5 -
DNLARFMHMAVDYAKEIEYT XYLA_BACSU 213 5 -
DNLARFMHMAVDYATEIGYT O08325 213 5 -
KNFARFLHMAADYAKEIGFE P77995 207 5 -
ENLARFLRMAVDYAKRIGFT XYLA_THENE 207 5 -
ENLSSFYRMAVEYAREIGFD P77832 205 5 -
DNLARFYQMVIDYAQKIDYH O82845 205 5 -
DNLATFFKMAKSYADEIGYT XYLA_STAXY 204 5 -
EHAAKFFHMAKDYANEIGFD XYLA_LACPE 209 5 -
EHAAKIFHMAKDYANEIGFD XYLA_LACBR 209 5 -
EQLGRFMQMVVEHKHKIGFQ XYLA_ECOLI 207 5 -
EQIGRFMQMVVEHKHKIGFK XYLA_HAEIN 207 5 -
EQLGRLLQLVVEHKHKIGFK XYLA_KLEAE 207 5 -
EHLANFLQAAVNHKKKIGFN Q40081 250 5 -
EHLANFLQAAVNHKKKIGFN Q40082 250 5 -
DRMKEAFDLLGEYVTSQGYD XYLA_STRAL 155 5 -
DRMKEAFDLLGEYVTSQGYD XYLA_STRRU 155 5 -
DRMKEAFDLLGEYVTAQGYD XYLA_STRVO 155 5 -
DRMKEAFDLLGEYVTSQGYD XYLA_STRDI 156 5 -
DRMKEAFDLLGEYVTSQGYD XYLA_STROL 155 5 -
DRMKEAFDLLGEYVTAQGYD XYLA_STRMR 156 5 -
DRMKEAFDLLGEYVTAQGYD XYLA_STRRO 154 5 -
DRYREALNLLAQYSEDQGYG XYLA_AMPSP 156 5 -
DRMREGVDTAAGYIKDKGYN XYLA_ARTS7 155 5 -
DRYREALNLLAQYSEDRGYG XYLA_ACTMI 155 5 -
DWVREALNFMAAYAEDQGYG XYLA_THETH 155 5 -

Motif 6 width=25
Element Seqn Id St Int Rpt
FLIEPKPKEPTKHQYDFDVATALAF XYLA_BACSP 227 2 -
FLIEPKPKEPTKHQYDFDVATRLAF XYLA_BACST 227 2 -
FLIEPKPKEPTKHQYDFDVANVLAF XYLA_THETU 229 2 -
FLIEPKPKEPTKHQYDFDVANVLAF XYLA_THESA 229 2 -
FLIEPKPKEPTKHQYDFDVANVLAF XYLA_CLOTS 229 2 -
FLIEPKPKEPTAHQYDTDAATTIAF P94491 235 2 -
FLIEPKPKEPTKHQYDFDAASVHAF XYLA_THEET 228 2 -
FLIEPKPKEPTTHQYDTDAATTIAF XYLA_BACSU 235 2 -
FLIEPKPKEPTTHQYDTDAATTISF O08325 235 2 -
FLIEPKPKEPTKHQYDFDVANVLAF P77995 229 2 -
FLIEPKPKEPTKHQYDFDVATAYAF XYLA_THENE 229 2 -
FLIEPKPKEPTKHQYDFDAATTIAF P77832 227 2 -
FLIEPKPKEPTKHQYDYDAATAMAF O82845 227 2 -
FLIEPKPKEPTTHQYDTDVATAHAF XYLA_STAXY 226 2 -
MLLEPKPKEPSTHQYDFDAATTIAF XYLA_LACPE 231 2 -
MLLEPKPKEPTTHQYDFDAATTIAF XYLA_LACBR 231 2 -
LLIEPKPQEPTKHQYDYDAATVYGF XYLA_ECOLI 229 2 -
LLIEPKPQEPTKHQYDYDVATVYGF XYLA_HAEIN 229 2 -
LLIEPKPQEPTKHQYDYDASTVYGF XYLA_KLEAE 229 2 -
LLIEPKPQEPTKHQYDWDVATTFSF Q40081 272 2 -
LLIEPKPQEPTKHQYDWDVATTFSF Q40082 272 2 -
FAIEPKPNEPRGDILLPTVGHALAF XYLA_STRAL 177 2 -
FAIEPKPNEPRGDILLPTVGHALAF XYLA_STRRU 177 2 -
FAIEPKPNEPRGDILLPTVGHALAF XYLA_STRVO 177 2 -
FAIEPKPNEPRGDILLPTIGHALAF XYLA_STRDI 178 2 -
FAIEPKPNEPRGDILLPTVGHALAF XYLA_STROL 177 2 -
FAIEPKPNEPRGDILLPTVGHALAF XYLA_STRMR 178 2 -
FAIEPKPNEPRGDILLPTVGHALAF XYLA_STRRO 176 2 -
FAIEPKPNEPRGDILLPTAGHAIAF XYLA_AMPSP 178 2 -
IALEPKPNEPRGDIFLPTVGHGLAF XYLA_ARTS7 177 2 -
FAIEPKPNEPRGDILLPTAGHAIAF XYLA_ACTMI 177 2 -
FALEPKPNEPRGDIYFATVGSMLAF XYLA_THETH 177 2 -

Motif 7 width=28
Element Seqn Id St Int Rpt
HATLAGHTFEHELRVARIHGMLGSVDAN XYLA_BACSP 269 17 -
HATLAGHTFEHELRVARIHGMLGSVDAN XYLA_BACST 269 17 -
HATLAFHDFQHELRYARINGVLGSIDAN XYLA_THETU 271 17 -
HATLAFHDFQHELRYARINGVLGSIDAN XYLA_THESA 271 17 -
HATLAAHDFQHELRYARINGVLGSIDAN XYLA_CLOTS 271 17 -
HATLAGHTFEHELRMARVHGLLGSVDAN P94491 277 17 -
HATLAGHDFQHELRYARINNMLGSIDAN XYLA_THEET 270 17 -
HATLAGHTFEHELRMARVHGLLGSVDAN XYLA_BACSU 277 17 -
HATLAGHTFEHELRVARVQGLLGSVDAN O08325 277 17 -
HATLAFHDFQHELRYARINGVLGSIDAN P77995 271 17 -
HATLAGHTFQHELRMARILGKLGSIDAN XYLA_THENE 271 17 -
HATLAGHTFEHELRVAALHDMLGSIDAN P77832 269 17 -
HATLAGHTFEHELNVAKNYNALGSLDAN O82845 269 17 -
HATLAGHTFQHELRYARDNNMLGSVDAN XYLA_STAXY 268 17 -
HANLAGHTYQHEIRVAREANLLGSLDAN XYLA_LACPE 273 17 -
HANLAGHTYQHEIRVAREAGLLGSLDAN XYLA_LACBR 273 17 -
HATLAGHSFHHEIATAIALGLFGSVDAN XYLA_ECOLI 271 17 -
HATLAGHTFQHEIATACALDIFGSIDAN XYLA_HAEIN 271 17 -
HATLAGHSFHHEIATAIALGLFGSVDAN XYLA_KLEAE 271 17 -
HATLSGHSCHHELETARINDILGNIDAN Q40081 314 17 -
HATLSGHSCHHELETARINDILGNIDAN Q40082 314 17 -
HEQMAGLNFPHGIAQALWAGKLFHIDLN XYLA_STRAL 219 17 -
HEQMAGLNFPHGIAQALWAGKLFHIDLN XYLA_STRRU 219 17 -
HEQMAGLNFPHGIAQALWAGKLFHIDLN XYLA_STRVO 219 17 -
HEQMAGLNFPHGIAQALWAGKLFHIDLN XYLA_STRDI 220 17 -
HEQMAGLNFPHGIAQALWAGKLFHIDLN XYLA_STROL 219 17 -
HEQMAGLNFPHGIAQALWAGKLFHIDLN XYLA_STRMR 220 17 -
HEQMAGLNFPHGIAQALWAGKLFHIDLN XYLA_STRRO 218 17 -
HEQMSNLNFTQGIAQALWHKKLFHIDLN XYLA_AMPSP 220 17 -
HEQMAGLNFTHGIAQALWAEKLFHIDLN XYLA_ARTS7 219 17 -
HEQMSNLNFTQGIAQALWHKKLFHIDLN XYLA_ACTMI 219 17 -
HETMAGLNFVHAVAQALDAGKLFHIDLN XYLA_THETH 219 17 -

Motif 8 width=12
Element Seqn Id St Int Rpt
GDMLLGWDTDEF XYLA_BACSP 298 1 -
GDMLLGWDTDEF XYLA_BACST 298 1 -
GDMLLGWDTDQF XYLA_THETU 300 1 -
GDMLLGWDTDQF XYLA_THESA 300 1 -
GDMLLGWDTDQF XYLA_CLOTS 300 1 -
GHPLLGWDTDEF P94491 306 1 -
GDMLLGWDTDQY XYLA_THEET 299 1 -
GHPLLGWDTDEF XYLA_BACSU 306 1 -
GDPLLGWDTDEF O08325 306 1 -
GDMLLGWDTDQF P77995 300 1 -
GDLLLGWDTDQF XYLA_THENE 300 1 -
GDLLLGWDTDEF P77832 298 1 -
GDLLLGWDTDEF O82845 298 1 -
GHPLLGWDTDES XYLA_STAXY 297 1 -
GDKLIGWDIDEF XYLA_LACPE 302 1 -
GDKLIGWDIDEY XYLA_LACBR 302 1 -
GDAQLGWDTDQF XYLA_ECOLI 300 1 -
GDPQLGWDTDQF XYLA_HAEIN 300 1 -
GDPQLGWDTDQF XYLA_KLEAE 300 1 -
GDPQVGWDTDEF Q40081 343 1 -
GDPQVGWDTDEF Q40082 343 1 -
GQNGIKYDQDLR XYLA_STRAL 247 0 -
GQNGIKYDQDLR XYLA_STRRU 247 0 -
GQSGIKYDQDLR XYLA_STRVO 247 0 -
GQSGIKYDQDLR XYLA_STRDI 248 0 -
GQSGIKYDQDLR XYLA_STROL 247 0 -
GQSGIKYDQDLR XYLA_STRMR 248 0 -
GQSGIKYDQDCG XYLA_STRRO 246 0 -
GQHGPKFDQDLV XYLA_AMPSP 248 0 -
GQRGIKYDQDLV XYLA_ARTS7 247 0 -
GQHGPKFDQDLV XYLA_ACTMI 247 0 -
DQRMSRFDQDLR XYLA_THETH 247 0 -

Motif 9 width=12
Element Seqn Id St Int Rpt
RGGLNFDAKVRR XYLA_BACSP 331 21 -
RGGLNFDAKVRR XYLA_BACST 331 21 -
KGGLNFDAKVRR XYLA_THETU 333 21 -
KGGLNFDAKVRR XYLA_THESA 333 21 -
KGGLNFDAKVRR XYLA_CLOTS 333 21 -
SGGLNFDAKVRR P94491 339 21 -
KGGLNFDAKVRR XYLA_THEET 332 21 -
SGGLNFDAKVRR XYLA_BACSU 339 21 -
SGGLNFDAKVRR O08325 339 21 -
KGGLNFDAKVRR P77995 333 21 -
KGGLNFDAKVRR XYLA_THENE 333 21 -
TGGINFDAKVRR P77832 331 21 -
PGGLNFDAKVRR O82845 331 21 -
PGGLNFDAKPRR XYLA_STAXY 329 20 -
RGGLNFDAKPRR XYLA_LACPE 336 22 -
RGGLNFDAKPRR XYLA_LACBR 336 22 -
TGGLNFDAKVRR XYLA_ECOLI 333 21 -
TGGFNFDAKIRR XYLA_HAEIN 333 21 -
TGGLNFDAKVRR XYLA_KLEAE 333 21 -
PGGFNFYAKLRR Q40081 376 21 -
PGGFNFYAKLRR Q40082 376 21 -
SGPRHFDFKPPR XYLA_STRAL 280 21 -
SGPRHFDFKPPR XYLA_STRRU 280 21 -
EGPRHFDFKPPR XYLA_STRVO 280 21 -
EGPRHFDFKPPR XYLA_STRDI 281 21 -
EGPRHFDFKPPR XYLA_STROL 280 21 -
EGPRHFDFKPPR XYLA_STRMR 281 21 -
EGPRHFDFKPPR XYLA_STRRO 278 20 -
DGPRHFDYKPSR XYLA_AMPSP 286 26 -
TGPRHFDYKPSR XYLA_ARTS7 286 27 -
DGPRHFDYKPSR XYLA_ACTMI 285 26 -
QGPRHFDAHALR XYLA_THETH 280 21 -