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PR00260

Identifier
CHEMTRNSDUCR  [View Relations]  [View Alignment]  
Accession
PR00260
No. of Motifs
7
Creation Date
18-JUL-1994  (UPDATE 14-JUN-1999)
Title
Bacterial chemotaxis sensory transducer signature
Database References

PROSITE; PS00538 CHEMOTAXIS_TRANSDUCER
PFAM; PF00015 MCPsignal
INTERPRO; IPR000122
Literature References
1. BOYD, A., KENDALL, K. AND SIMON, M.I.
Structure of the serine chemoreceptor in Escherichia coli.
NATURE 301 623-626 (1983).
 
2. KRIKOS, A., MUTOH, N., BOYD, A. AND SIMON, M.I.
Sensory transducers of E.coli are composed of discrete structural and
functional domains.
CELL 33 615-622 (1983).
 
3. RICE, M.S. AND DAHLQUIST, F.W.
Sites of deamidation and methylation in Tsr, a bacterial chemotaxis sensory
transducer.
J.BIOL.CHEM. 266 9746-0753 (1991).

Documentation
Many biological processes depend on the function of proteins that detect
changes in a cell's environment and transmit the information to the 
cytoplasm [1]. In bacteria, such a class of proteins is represented by 
the methyl-accepting chemotaxis transducers, which play a central role 
in mediating chemotactic behaviour [1]. 
 
The transducers detect changes in the extracellular concentration of a
small number of attractants or repellents (such as serine, maltose, ribose,
etc.), and signal changes to the flagellar apparatus of the cell [1]. The
detection of these changes is facilitated by the methylation of the
transducers at a number of glutamate residues, the level of methylation
depending on the attractant concentration [1]. The proteins appear to
possess the following components: an N-terminal signal sequence that acts
as a transmembrane (TM) domain in the mature protein; a poorly-conserved
periplasmic receptor region; a second TM domain; and a highly-conserved
C-terminal cytoplasmic region [2], which contains the glycosylated
glutamate residues [3].
 
CHEMTRNSDUCR is a 7-element fingerprint that provides a signature for the
bacterial chemotaxis transducers. The fingerprint was derived from an
initial alignment of 6 sequences: motifs 1 and 3 span the 2 TM domains;
motif 2 corresponds to a conserved region in the periplasmic receptor
region; and motifs 4-7 span highly conserved areas in the C-terminal
cytoplasmic domain - motif 4 includes the region encoded by PROSITE
pattern CHEMOTAXIS_TRANSDUCER (PS00538), in which some of the Glu/Gln
residues undergo reversible methylation. Two iterations on OWL23.2 were
required to reach convergence, at which point a true set comprising 8
sequences was identified. Several partial matches were also found -
these are chemotaxis inducer fragments, or homologues showing only low
levels of similarity to the motifs (most match motifs 4-7).
 
An update on SPTR37_9f identified a true set of 7 sequences, and 78
partial matches.
Summary Information
   7 codes involving  7 elements
0 codes involving 6 elements
0 codes involving 5 elements
6 codes involving 4 elements
23 codes involving 3 elements
49 codes involving 2 elements
Composite Feature Index
77777777
60000000
50000000
40006666
30001623237
2000049481
1234567
True Positives
MCP1_ECOLI    MCP2_ECOLI    MCP2_SALTY    MCP4_ECOLI    
MCPC_SALTY MCPD_ENTAE MCPS_ENTAE
True Positive Partials
Codes involving 4 elements
MCP3_ECOLI O30603 O30965 O68048
Q52699 Q52700
Codes involving 3 elements
AER_ECOLI CPS_CLOTM DCRA_DESVH HTR3_HALSA
MCPA_CAUCR MCPB_BACSU O08228 O24925
O29217 O29228 O34576 O50287
O51623 O51624 O68016 O68028
P95626 Q44385 Q46583 Q52781
Q53171 Q56633 Y4FA_RHISN
Codes involving 2 elements
FRZC_MYXXA HLYB_VIBCH HTR1_HALSA HTR2_HALSA
HTR2_NATPH HTR4_HALSA HTR5_HALSA HTR6_HALSA
HTRI_HALHA MCPA_BACSU MCPC_BACSU O06022
O06508 O24911 O24929 O25321
O32440 O32442 O32443 O51543
O52777 O57733 O58181 O58196
O58227 O59504 O59634 O83646
O85123 O85779 P71409 P71412
P71413 P71414 P71415 P73008
P94847 PILJ_PSEAE Q51509 Q55444
Q55445 Q56321 Q56344 TCPI_VIBCH
TLPA_BACSU TLPB_BACSU TLPC_BACSU Y4SI_RHISN
YCH1_RHIME
Sequence Titles
MCP1_ECOLI  METHYL-ACCEPTING CHEMOTAXIS PROTEIN I (MCP-I) (SERINE CHEMORECEPTOR PROTEIN) - ESCHERICHIA COLI. 
MCP2_ECOLI METHYL-ACCEPTING CHEMOTAXIS PROTEIN II (MCP-II) (ASPARTATE CHEMORECEPTOR PROTEIN) - ESCHERICHIA COLI.
MCP2_SALTY METHYL-ACCEPTING CHEMOTAXIS PROTEIN II (MCP-II) (ASPARTATE CHEMORECEPTOR PROTEIN) - SALMONELLA TYPHIMURIUM.
MCP4_ECOLI METHYL-ACCEPTING CHEMOTAXIS PROTEIN IV (MCP-IV) (DIPEPTIDE CHEMORECEPTOR PROTEIN) - ESCHERICHIA COLI.
MCPC_SALTY METHYL-ACCEPTING CHEMOTAXIS CITRATE TRANSDUCER (CITRATE CHEMORECEPTOR PROTEIN) - SALMONELLA TYPHIMURIUM.
MCPD_ENTAE METHYL-ACCEPTING CHEMOTAXIS ASPARTATE TRANSDUCER - ENTEROBACTER AEROGENES (AEROBACTER AEROGENES).
MCPS_ENTAE METHYL-ACCEPTING CHEMOTAXIS SERINE TRANSDUCER - ENTEROBACTER AEROGENES (AEROBACTER AEROGENES).

MCP3_ECOLI METHYL-ACCEPTING CHEMOTAXIS PROTEIN III (MCP-III) (RIBOSE AND GALACTOSE CHEMORECEPTOR PROTEIN) - ESCHERICHIA COLI.
O30603 METHYL-ACCEPTING CHEMOTAXIS PROTEIN - TREPONEMA DENTICOLA.
O30965 PUTATIVE METHYL ACCEPTING CHEMOTAXIS PROTEIN - RHIZOBIUM LEGUMINOSARUM.
O68048 CHEMORECEPTOR - RHODOBACTER CAPSULATUS (RHODOPSEUDOMONAS CAPSULATA).
Q52699 METHYL-ACCEPTING CHEMORECEPTORS (MCPA AND MCPB) GENES, COMPLETE CDS (MCPA AND MCPB) - RHODOBACTER CAPSULATUS (RHODOPSEUDOMONAS CAPSULATA).
Q52700 METHYL-ACCEPTING CHEMORECEPTORS (MCPA AND MCPB) GENES, COMPLETE CDS (MCPA AND MCPB) - RHODOBACTER CAPSULATUS (RHODOPSEUDOMONAS CAPSULATA).

AER_ECOLI AEROTAXIS RECEPTOR - ESCHERICHIA COLI.
CPS_CLOTM PUTATIVE SENSORY TRANSDUCER PROTEIN - CLOSTRIDIUM THERMOCELLUM.
DCRA_DESVH CHEMORECEPTOR PROTEIN A - DESULFOVIBRIO VULGARIS (STRAIN HILDENBOROUGH).
HTR3_HALSA HALOBACTERIAL TRANSDUCER PROTEIN III - HALOBACTERIUM SALINARIUM.
MCPA_CAUCR CHEMORECEPTOR MCPA (METHYL-ACCEPTING CHEMOTAXIS PROTEIN) - CAULOBACTER CRESCENTUS.
MCPB_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPB (H3) - BACILLUS SUBTILIS.
O08228 METHYL-ACCEPTING CHEMOTAXIS PROTEINS - RHIZOBIUM LEGUMINOSARUM.
O24925 METHYL-ACCEPTING CHEMOTAXIS PROTEIN (TLPA) - HELICOBACTER PYLORI (CAMPYLOBACTER PYLORI).
O29217 METHYL-ACCEPTING CHEMOTAXIS PROTEIN (TLPC-2) - ARCHAEOGLOBUS FULGIDUS.
O29228 METHYL-ACCEPTING CHEMOTAXIS PROTEIN (TLPC-1) - ARCHAEOGLOBUS FULGIDUS.
O34576 YOAH - BACILLUS SUBTILIS.
O50287 PUTATIVE METHYL ACCEPTING CHEMOTAXIS PROTEIN - RHIZOBIUM LEGUMINOSARUM.
O51623 METHYL-ACCEPTING CHEMOTAXIS PROTEIN (MCP-4) - BORRELIA BURGDORFERI (LYME DISEASE SPIROCHETE).
O51624 METHYL-ACCEPTING CHEMOTAXIS PROTEIN (MCP-5) - BORRELIA BURGDORFERI (LYME DISEASE SPIROCHETE).
O68016 MCPA - AGROBACTERIUM TUMEFACIENS.
O68028 METHYL-ACCEPTING CHEMORECEPTOR - RHODOBACTER CAPSULATUS (RHODOPSEUDOMONAS CAPSULATA).
P95626 METHYLATION ACCEPTING CHEMOTAXIS PROTEIN - RHIZOBIUM LEGUMINOSARUM.
Q44385 PUTATIVE CHEMORECEPTOR (METHYL-ACCEPTING CHEMOTAXIS PROTEIN) (ORF2) - AGROBACTERIUM TUMEFACIENS.
Q46583 DCRH - DESULFOVIBRIO VULGARIS.
Q52781 CHEMORECEPTOR PROTEIN - RHIZOBIUM LEGUMINOSARUM.
Q53171 MCPA PROTEIN - RHODOBACTER SPHAEROIDES (RHODOPSEUDOMONAS SPHAEROIDES).
Q56633 ACCESSORY COLONIZATION FACTOR (ACFB) - VIBRIO CHOLERAE.
Y4FA_RHISN PROBABLE CHEMORECEPTOR Y4FA (METHYL-ACCEPTING CHEMOTAXIS PROTEIN) - RHIZOBIUM SP. (STRAIN NGR234).

FRZC_MYXXA FRZCD PROTEIN (FRIZZY AGGREGATION PROTEIN FRZCD) - MYXOCOCCUS XANTHUS.
HLYB_VIBCH HEMOLYSIN SECRETION PROTEIN PRECURSOR - VIBRIO CHOLERAE.
HTR1_HALSA SENSORY RHODOPSIN I TRANSDUCER (HTR-I) (METHYL-ACCEPTING PHOTOTAXIS PROTEIN I) (MPP-I) - HALOBACTERIUM SALINARIUM.
HTR2_HALSA SENSORY RHODOPSIN II TRANSDUCER (HTR-II) (METHYL-ACCEPTING PHOTOTAXIS PROTEIN II) (MPP-II) - HALOBACTERIUM SALINARIUM.
HTR2_NATPH SENSORY RHODOPSIN II TRANSDUCER (HTR-II) (METHYL-ACCEPTING PHOTOTAXIS PROTEIN II) (MPP-II) - NATRONOMONAS PHARAONIS (NATRONOBACTERIUM PHARAONIS).
HTR4_HALSA HALOBACTERIAL TRANSDUCER PROTEIN IV - HALOBACTERIUM SALINARIUM.
HTR5_HALSA HALOBACTERIAL TRANSDUCER PROTEIN V - HALOBACTERIUM SALINARIUM.
HTR6_HALSA HALOBACTERIAL TRANSDUCER PROTEIN VI - HALOBACTERIUM SALINARIUM.
HTRI_HALHA SENSORY RHODOPSIN I TRANSDUCER (HTR-I) (METHYL-ACCEPTING PHOTOTAXIS PROTEIN I) (MPP-I) - HALOBACTERIUM HALOBIUM.
MCPA_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPA (H1) - BACILLUS SUBTILIS.
MCPC_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPC - BACILLUS SUBTILIS.
O06022 SOLUBLE TRANSDUCER PROTEIN HTH - HALOBACTERIUM SALINARIUM.
O06508 SY V-ATPASE PROTEOLIPID - DESULFUROCOCCUS SP. (STRAIN SY).
O24911 METHYL-ACCEPTING CHEMOTAXIS TRANSDUCER (TLPC) - HELICOBACTER PYLORI (CAMPYLOBACTER PYLORI).
O24929 METHYL-ACCEPTING CHEMOTAXIS PROTEIN (TLPB) - HELICOBACTER PYLORI (CAMPYLOBACTER PYLORI).
O25321 HEMOLYSIN SECRETION PROTEIN PRECURSOR (HYLB) - HELICOBACTER PYLORI (CAMPYLOBACTER PYLORI).
O32440 CHEMOTACTIC TRANSDUCER - PSEUDOMONAS AERUGINOSA.
O32442 CHEMOTACTIC TRANSDUCER - PSEUDOMONAS AERUGINOSA.
O32443 CHEMOTACTIC TRANSDUCER - PSEUDOMONAS AERUGINOSA.
O51543 METHYL-ACCEPTING CHEMOTAXIS PROTEIN (MCP-3) - BORRELIA BURGDORFERI (LYME DISEASE SPIROCHETE).
O52777 PUTATIVE METHYL-ACCEPTING CHEMOTAXIS PROTEIN - TREPONEMA PALLIDUM.
O57733 261AA LONG HYPOTHETICAL CHEMORECEPTOR PROTEIN - PYROCOCCUS HORIKOSHII.
O58181 428AA LONG HYPOTHETICAL METHYL-ACCEPTING CHEMOTAXIS PROTEIN - PYROCOCCUS HORIKOSHII.
O58196 277AA LONG HYPOTHETICAL METHYL-ACCEPTING CHEMOTAXIS PROTEIN - PYROCOCCUS HORIKOSHII.
O58227 739AA LONG HYPOTHETICAL CHEMOTAXIS PROTEIN - PYROCOCCUS HORIKOSHII.
O59504 507AA LONG HYPOTHETICAL METHYL-ACCEPTING CHEMOTAXIS PROTEIN - PYROCOCCUS HORIKOSHII.
O59634 METHYL-ACCEPTING AEROTAXIS TRANSDUCER PROTEIN - HALOBACTERIUM SALINARIUM.
O83646 METHYL-ACCEPTING CHEMOTAXIS PROTEIN (MCP2-2) - TREPONEMA PALLIDUM.
O85123 MCP HOMOLOG - AGROBACTERIUM TUMEFACIENS.
O85779 DEFECTIVE IN FRUITING DIFA - MYXOCOCCUS XANTHUS.
P71409 TRANSDUCER HTI PROTEIN - HALOBACTERIUM SALINARIUM.
P71412 TRANSDUCER HTA PROTEIN - HALOBACTERIUM SALINARIUM.
P71413 TRANSDUCER HTB PROTEIN - HALOBACTERIUM SALINARIUM.
P71414 TRANSDUCER HTC PROTEIN - HALOBACTERIUM SALINARIUM.
P71415 TRANSDUCER HTD PROTEIN - HALOBACTERIUM SALINARIUM.
P73008 METHYL-ACCEPTING CHEMOTAXIS PROTEIN - SYNECHOCYSTIS SP. (STRAIN PCC 6803).
P94847 48 KDA ANTIGEN - HELICOBACTER PYLORI (CAMPYLOBACTER PYLORI).
PILJ_PSEAE PILJ PROTEIN - PSEUDOMONAS AERUGINOSA.
Q51509 TRANSDUCER - PSEUDOMONAS AERUGINOSA.
Q55444 METHYL-ACCEPTING CHEMOTAXIS PROTEIN II - SYNECHOCYSTIS SP. (STRAIN PCC 6803).
Q55445 METHYL-ACCEPTING CHEMOTAXIS PROTEIN I - SYNECHOCYSTIS SP. (STRAIN PCC 6803).
Q56321 GRAM-NEGATIVE BACTERIA TRANSPOSON TN1721; TETA, TETR, TNPA, TNPR GENES - ESCHERICHIA COLI.
Q56344 MCP-1 - TREPONEMA PALLIDUM.
TCPI_VIBCH TOXIN CORREGULATED PILUS BIOSYNTHESIS PROTEIN I (TCP PILUS BIOSYNTHESIS PROTEIN TCPI) - VIBRIO CHOLERAE.
TLPA_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN TLPA - BACILLUS SUBTILIS.
TLPB_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN TLPB - BACILLUS SUBTILIS.
TLPC_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN TLPC - BACILLUS SUBTILIS.
Y4SI_RHISN PROBABLE CHEMORECEPTOR Y4SI (METHYL-ACCEPTING CHEMOTAXIS PROTEIN) - RHIZOBIUM SP. (STRAIN NGR234).
YCH1_RHIME HYPOTHETICAL 57.4 KD PROTEIN IN CHEY1 5'REGION (ORF1) - RHIZOBIUM MELILOTI.
Scan History
OWL23_2    2  100  NSINGLE    
OWL28_0 1 100 NSINGLE
SPTR37_9f 2 100 NSINGLE
Initial Motifs
Motif 1  width=26
Element Seqn Id St Int Rpt
IKIVTSLLLVLAVFGLLQLTSGGLFF MCP1_ECOLI 5 5 -
IRVVTMLMMVLGVFALLQLVSGGLLF MCP2_SALTY 5 5 -
IRISTSLFLLLISFCIMQLISTGLSY MCPD_ENTAE 5 5 -
IKVITGVIATLGIFSALLLVTGILFY MCPC_SALTY 4 4 -
IRISTTLFLILILCGILQIGSNGMSF MCP4_ECOLI 5 5 -

Motif 2 width=16
Element Seqn Id St Int Rpt
LLQTRNTLNRAGIRYM MCP1_ECOLI 60 29 -
MLQTRINLSRSAARMM MCP2_SALTY 60 29 -
LLQARNTLNRAGTRGA MCPD_ENTAE 59 28 -
LIETRVTINRVAIRML MCPC_SALTY 59 29 -
LAQTRAVMLQASTALN MCP4_ECOLI 53 22 -

Motif 3 width=21
Element Seqn Id St Int Rpt
QAMWILVGVMIVVLAVIFAVW MCP1_ECOLI 191 115 -
FAQWQLGVLAVVLVLILMVVW MCP2_SALTY 189 113 -
PIWLVAGAVLMLLVVTLSAMW MCPD_ENTAE 186 111 -
QMQWTLGIILLIVLIVLAFIW MCPC_SALTY 190 115 -
SALVFISMIIVAAIYISSALW MCP4_ECOLI 188 119 -

Motif 4 width=30
Element Seqn Id St Int Rpt
DLSSRTEQQAASLEETAASMEQLTATVKQN MCP1_ECOLI 290 78 -
DLSSRTEQQASALEETAASMEQLTATVKQN MCP2_SALTY 288 78 -
DLSSRTEQQDRSLEETAASMEQLTATVKQN MCPD_ENTAE 284 77 -
DLSSRTEQQASALEETAASMEQLTATVRQN MCPC_SALTY 289 78 -
DLSSRTEQQAASLAQTAASMEQLTATVGQN MCP4_ECOLI 286 77 -

Motif 5 width=28
Element Seqn Id St Int Rpt
VIDGIAFQTNILALNAAVEAARAGEQGR MCP1_ECOLI 367 47 -
VIDGIAFQTNILALNAAVEAARAGEQGR MCP2_SALTY 365 47 -
VIDGIAFQTNILALNAAVEAARAGEQGR MCPD_ENTAE 360 46 -
VIDGIAFQTNILALNAAVEAARAGEQGR MCPC_SALTY 366 47 -
VIDGIAFQTNILALNAAVEAARAGEQGR MCP4_ECOLI 363 47 -

Motif 6 width=30
Element Seqn Id St Int Rpt
FAVVAGEVRNLAQRSAQAAREIKSLIEDSV MCP1_ECOLI 396 1 -
FAVVAGEVRNLASRSAQAAKEIKALIEDSV MCP2_SALTY 394 1 -
FAVVAGEVRNLASRSAQAAKEIKLLIDESV MCPD_ENTAE 389 1 -
FAVVAGEVRTLASRSAQAAKEIKVLIENSV MCPC_SALTY 395 1 -
FAVVAGEVRNLASRSAQAAKEIKGLIEESV MCP4_ECOLI 392 1 -

Motif 7 width=30
Element Seqn Id St Int Rpt
EIVSAVTRVTDIMGEIASASDEQSRGIDQV MCP1_ECOLI 444 18 -
DIVNAVTRVADIMGEIASASDEQSRGIDQV MCP2_SALTY 442 18 -
DIVRSVTRVTDIMGEIASASDEQSRGIEQV MCPD_ENTAE 437 18 -
EIVNAVTRVTDIMGEIASASDEQSKGIEQV MCPC_SALTY 443 18 -
DIVSSVTRVNDIMGEIASASEEQQRGIEQV MCP4_ECOLI 440 18 -
Final Motifs
Motif 1  width=26
Element Seqn Id St Int Rpt
IKIVTSLLLVLAVFGLLQLTSGGLFF MCP1_ECOLI 5 5 -
IKVVTSLLLVLVLFGALQLISGGLFF MCPS_ENTAE 5 5 -
IRVVTLLVMVLGVFALLQLISGSLFF MCP2_ECOLI 5 5 -
IRVVTMLMMVLGVFALLQLVSGGLLF MCP2_SALTY 5 5 -
IRISTSLFLLLISFCIMQLISTGLSY MCPD_ENTAE 5 5 -
IKVITGVIATLGIFSALLLVTGILFY MCPC_SALTY 4 4 -
IRISTTLFLILILCGILQIGSNGMSF MCP4_ECOLI 5 5 -

Motif 2 width=16
Element Seqn Id St Int Rpt
LLQTRNTLNRAGIRYM MCP1_ECOLI 60 29 -
LLQARNSLNRAGIRYM MCPS_ENTAE 60 29 -
MLQTRINLSRSAVRMM MCP2_ECOLI 60 29 -
MLQTRINLSRSAARMM MCP2_SALTY 60 29 -
LLQARNTLNRAGTRGA MCPD_ENTAE 59 28 -
LIETRVTINRVAIRML MCPC_SALTY 59 29 -
LAQTRAVMLQASTALN MCP4_ECOLI 53 22 -

Motif 3 width=21
Element Seqn Id St Int Rpt
QAMWILVGVMIVVLAVIFAVW MCP1_ECOLI 191 115 -
SAIWTLIVVIIVVLAAIVGVW MCPS_ENTAE 193 117 -
FAQWQLAVIALVVVLILLVAW MCP2_ECOLI 189 113 -
FAQWQLGVLAVVLVLILMVVW MCP2_SALTY 189 113 -
PIWLVAGAVLMLLVVTLSAMW MCPD_ENTAE 186 111 -
QMQWTLGIILLIVLIVLAFIW MCPC_SALTY 190 115 -
SALVFISMIIVAAIYISSALW MCP4_ECOLI 188 119 -

Motif 4 width=30
Element Seqn Id St Int Rpt
DLSSRTEQQAASLEETAASMEQLTATVKQN MCP1_ECOLI 290 78 -
DLSSRTEQQAAALEETAASMEQLTATVKQN MCPS_ENTAE 292 78 -
DLSSRTEQQASALEETAASMEQLTATVKQN MCP2_ECOLI 288 78 -
DLSSRTEQQASALEETAASMEQLTATVKQN MCP2_SALTY 288 78 -
DLSSRTEQQDRSLEETAASMEQLTATVKQN MCPD_ENTAE 284 77 -
DLSSRTEQQASALEETAASMEQLTATVRQN MCPC_SALTY 289 78 -
DLSSRTEQQAASLAQTAASMEQLTATVGQN MCP4_ECOLI 286 77 -

Motif 5 width=28
Element Seqn Id St Int Rpt
VIDGIAFQTNILALNAAVEAARAGEQGR MCP1_ECOLI 367 47 -
VIDVIAFQTNILALNAAVEAARAGEQGR MCPS_ENTAE 369 47 -
VIDGIAFQTNILALNAAVEAARAGEQGR MCP2_ECOLI 365 47 -
VIDGIAFQTNILALNAAVEAARAGEQGR MCP2_SALTY 365 47 -
VIDGIAFQTNILALNAAVEAARAGEQGR MCPD_ENTAE 360 46 -
VIDGIAFQTNILALNAAVEAARAGEQGR MCPC_SALTY 366 47 -
VIDGIAFQTNILALNAAVEAARAGEQGR MCP4_ECOLI 363 47 -

Motif 6 width=30
Element Seqn Id St Int Rpt
FAVVAGEVRNLAQRSAQAAREIKSLIEDSV MCP1_ECOLI 396 1 -
FAVVAGEVRNLAQRSAQAAKEIKALIEDSV MCPS_ENTAE 398 1 -
FAVVAGEVRNLASRSAQAAKEIKALIEDSV MCP2_ECOLI 394 1 -
FAVVAGEVRNLASRSAQAAKEIKALIEDSV MCP2_SALTY 394 1 -
FAVVAGEVRNLASRSAQAAKEIKLLIDESV MCPD_ENTAE 389 1 -
FAVVAGEVRTLASRSAQAAKEIKVLIENSV MCPC_SALTY 395 1 -
FAVVAGEVRNLASRSAQAAKEIKGLIEESV MCP4_ECOLI 392 1 -

Motif 7 width=30
Element Seqn Id St Int Rpt
EIVSAVTRVTDIMGEIASASDEQSRGIDQV MCP1_ECOLI 444 18 -
DIVNAVTRVTDIMGEIASASDEQSRGIDQV MCPS_ENTAE 446 18 -
NIVNAVTRVTDIMGEIASASDEQSRGIDQV MCP2_ECOLI 442 18 -
DIVNAVTRVADIMGEIASASDEQSRGIDQV MCP2_SALTY 442 18 -
DIVRSVTRVTDIMGEIASASDEQSRGIEQV MCPD_ENTAE 437 18 -
EIVNAVTRVTDIMGEIASASDEQSKGIEQV MCPC_SALTY 443 18 -
DIVSSVTRVNDIMGEIASASEEQQRGIEQV MCP4_ECOLI 440 18 -