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PR00135

Identifier
LYZLACT  [View Relations]  [View Alignment]  
Accession
PR00135
No. of Motifs
6
Creation Date
29-MAY-1991  (UPDATE 27-JUN-1999)
Title
Lysozyme/alpha-lactalbumin superfamily signature
Database References
PRINTS; PR00136 LACTALBUMIN; PR00137 LYSOZYME
PROSITE; PS00128 LACTALBUMIN_LYSOZYME
PFAM; PF00062 lys
INTERPRO; IPR001916
PDB; 1LYM
SCOP; 1LYM
CATH; 1LYM
Literature References
1. SHEWALE, J.G., SUDHIR, K.S. AND BREW, K. 
Evolution of alpha-lactalbumins.
J.BIOL.CHEM. 259 4947-4956 (1984).
 
2. IRWIN, D.M. AND WILSON, A.C. 
Multiple cDNA sequences and the evolution of bovine stomach lysozyme. 
J.BIOL.CHEM. 264 11387-11393 (1989).
 
3. STUART, D.I., ACHYARA, K.R., WALKER, N.P.C., SMITH, S.G., LEWIS M.
AND  PHILLIPS D.C. 
Alpha-lactalbumin possesses a novel calcium binding loop. 
NATURE 324 84-87 (1986). 
 
4. NITTA, K., HIDEAKI, H., SHINTARO, S. AND SHIMAZAKI, K. 
The calcium binding property of equine lysozyme. 
FEBS LETT. 223 405-408 (1987). 

Documentation
Lysozyme C and alpha-lactalbumin and are similar both in terms of primary 
sequence and structure, and probably evolved from a common ancestral 
protein. There is, however, no similarity in function as lactalbumin 
promotes the conversion of galactosyltransferase to lactose synthase and is
essential for milk production [1], while lysozyme catalyses the hydrolysis 
of bacterial cell wall polysaccharides; it has also been recruited for a 
digestive role in certain ruminants and colobine monkeys [2]. Another 
significant difference between the 2 enzymes is that all lactalbumins have 
the ability to bind calcium [3], while this property is restricted to only 
a few lysozymes [4]. The binding site was deduced using high resolution 
X-ray structure analysis and was shown to consist of 3 aspartic acid 
residues. It was first suggested that calcium bound to lactalbumin 
stabilised the structure, but recently it has been claimed that calcium 
controls the release of lactalbumin from the golgi membrane and that the 
pattern of ion binding may also affect the catalytic properties of the 
lactose synthetase complex.
 
LYZLACT is a 6-element fingerprint that provides a signature for the 
lysozyme/alpha-lactalbumin superfamily. The fingerprint was derived from 
an initial alignment of 12 sequences: motif 5 encodes the calcium binding 
region, and together with motif 4 contains 3 of the 8 cysteine residues 
conserved in both lysozymes and lactalbumins (cf. PROSITE pattern 
LACTALBUMIN_LYSOZYME (PS00128)). Two iterations on OWL10.1 were required to
reach convergence, at which point a true set comprising 81 sequences was 
identified.
 
An update on SPTR37_9f identified a true set of 75 sequences, and 17
partial matches.
Summary Information
  75 codes involving  6 elements
7 codes involving 5 elements
3 codes involving 4 elements
6 codes involving 3 elements
0 codes involving 2 elements
Composite Feature Index
6757575757575
5347777
4103332
3006561
2000000
123456
True Positives
LCAA_HORSE    LCAB_HORSE    LCA_BOVIN     LCA_CAMDR     
LCA_CAPHI LCA_EQUAS LCA_ORNAN LCA_PIG
LCA_RABIT LCA_SHEEP LCA_TRIVU LYC1_ANAPL
LYC1_CAPHI LYC1_PIG LYC1_RAT LYC2_CAPHI
LYC2_ONCMY LYC2_PIG LYC2_RAT LYC3_ANAPL
LYC3_PIG LYCK_SHEEP LYCM_MOUSE LYCP_MOUSE
LYC_ALLNI LYC_ANOGA LYC_AXIAX LYC_BOMMO
LYC_BOVIN LYC_CALJA LYC_CAMDR LYC_CERAE
LYC_CHICK LYC_CHRAM LYC_COLAN LYC_COLLI
LYC_COLVI LYC_COTJA LYC_EQUAS LYC_GORGO
LYC_HORSE LYC_HUMAN LYC_HYACE LYC_HYLLA
LYC_HYPCU LYC_LOPCA LYC_LOPLE LYC_MACMU
LYC_MELGA LYC_MIOTA LYC_NASLA LYC_NUMME
LYC_OPIHO LYC_ORTVE LYC_PAPAN LYC_PAVCR
LYC_PHACO LYC_PHAVE LYC_PONPY LYC_PREEN
LYC_PYGNE LYC_RABIT LYC_SAGOE LYC_SAISC
LYC_SHEEP LYC_SYRRE LYC_TRIVU O75951
P87493 Q06283 Q06284 Q06285
Q26363 Q27996 Q29447
True Positive Partials
Codes involving 5 elements
LCA_CAVPO LCA_HUMAN LCA_MOUSE LCA_PAPCY
LCA_RAT LYC1_TACAC O02418
Codes involving 4 elements
LCA_MACEU LCA_MACRG LYSS_DROME
Codes involving 3 elements
LYC_TRINI LYSA_DROME LYSB_DROME LYSD_DROME
LYSE_DROME LYSP_DROME
Sequence Titles
LCAA_HORSE  ALPHA-LACTALBUMIN A (LACTOSE SYNTHASE B PROTEIN) - EQUUS CABALLUS (HORSE). 
LCAB_HORSE ALPHA-LACTALBUMIN B/C (LACTOSE SYNTHASE B PROTEIN) - EQUUS CABALLUS (HORSE).
LCA_BOVIN ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - BOS TAURUS (BOVINE).
LCA_CAMDR ALPHA-LACTALBUMIN (LACTOSE SYNTHASE B PROTEIN) - CAMELUS DROMEDARIUS (DROMEDARY) (ARABIAN CAMEL).
LCA_CAPHI ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - CAPRA HIRCUS (GOAT).
LCA_EQUAS ALPHA-LACTALBUMIN (LACTOSE SYNTHASE B PROTEIN) - EQUUS ASINUS (DONKEY).
LCA_ORNAN ALPHA-LACTALBUMIN (LACTOSE SYNTHASE B PROTEIN) - ORNITHORHYNCHUS ANATINUS (DUCKBILL PLATYPUS).
LCA_PIG ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - SUS SCROFA (PIG).
LCA_RABIT ALPHA-LACTALBUMIN (LACTOSE SYNTHASE B PROTEIN) - ORYCTOLAGUS CUNICULUS (RABBIT).
LCA_SHEEP ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - OVIS ARIES (SHEEP).
LCA_TRIVU ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - TRICHOSURUS VULPECULA (BRUSH-TAILED POSSUM).
LYC1_ANAPL LYSOZYME C-1 PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - ANAS PLATYRHYNCHOS (DOMESTIC DUCK).
LYC1_CAPHI LYSOZYME C-1 (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C-1) - CAPRA HIRCUS (GOAT).
LYC1_PIG LYSOZYME C-1 (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - SUS SCROFA (PIG).
LYC1_RAT LYSOZYME C, TYPE 1 PRECURSOR (EC 3.2.1.17) (1,4-BETA-N- ACETYLMURAMIDASE C) - RATTUS NORVEGICUS (RAT).
LYC2_CAPHI LYSOZYME C-2 (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C-2) - CAPRA HIRCUS (GOAT).
LYC2_ONCMY LYSOZYME C II PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - ONCORHYNCHUS MYKISS (RAINBOW TROUT) (SALMO GAIRDNERI).
LYC2_PIG LYSOZYME C-2 PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - SUS SCROFA (PIG).
LYC2_RAT LYSOZYME C, TYPE 2 PRECURSOR (EC 3.2.1.17) (1,4-BETA-N- ACETYLMURAMIDASE C) - RATTUS NORVEGICUS (RAT).
LYC3_ANAPL LYSOZYME C-3 (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - ANAS PLATYRHYNCHOS (DOMESTIC DUCK).
LYC3_PIG LYSOZYME C-3 PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - SUS SCROFA (PIG).
LYCK_SHEEP LYSOZYME C, KIDNEY (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - OVIS ARIES (SHEEP).
LYCM_MOUSE LYSOZYME C, TYPE M PRECURSOR (EC 3.2.1.17) (1,4-BETA-N- ACETYLMURAMIDASE C) - MUS MUSCULUS (MOUSE).
LYCP_MOUSE LYSOZYME C, TYPE P PRECURSOR (EC 3.2.1.17) (1,4-BETA-N- ACETYLMURAMIDASE C) - MUS MUSCULUS (MOUSE).
LYC_ALLNI LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - ALLENOPITHECUS NIGROVIRIDIS (ALLEN'S SWAMP MONKEY).
LYC_ANOGA LYSOZYME PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - ANOPHELES GAMBIAE (AFRICAN MALARIA MOSQUITO).
LYC_AXIAX LYSOZYME C 1 AND 2 (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - AXIS AXIS (AXIS DEER) (CHITAL).
LYC_BOMMO LYSOZYME PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - BOMBYX MORI (SILK MOTH).
LYC_BOVIN LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - BOS TAURUS (BOVINE).
LYC_CALJA LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - CALLITHRIX JACCHUS (COMMON MARMOSET).
LYC_CAMDR LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - CAMELUS DROMEDARIUS (DROMEDARY) (ARABIAN CAMEL).
LYC_CERAE LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - CERCOPITHECUS AETHIOPS (GREEN MONKEY) (GRIVET), AND ERYTHROCEBUS PATAS (RED GUENON) (HUSSAR).
LYC_CHICK LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) (ALLERGEN GAL D 4) (GAL D IV) - GALLUS GALLUS (CHICKEN).
LYC_CHRAM LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - CHRYSOLOPHUS AMHERSTIAE (LADY AMHERST'S PHEASANT).
LYC_COLAN LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - COLOBUS ANGOLENSIS (ANGOLAN COLOBUS), AND COLOBUS GUEREZA.
LYC_COLLI LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - COLUMBA LIVIA (DOMESTIC PIGEON).
LYC_COLVI LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - COLINUS VIRGINIANUS (BOBWHITE QUAIL) (COMMON BOBWHITE).
LYC_COTJA LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - COTURNIX COTURNIX JAPONICA (JAPANESE QUAIL).
LYC_EQUAS LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - EQUUS ASINUS (DONKEY).
LYC_GORGO LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - GORILLA GORILLA GORILLA (LOWLAND GORILLA).
LYC_HORSE LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - EQUUS CABALLUS (HORSE).
LYC_HUMAN LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - HOMO SAPIENS (HUMAN), PAN TROGLODYTES (CHIMPANZEE), AND PAN PANISCUS (PYGMY CHIMPANZEE) (BONOBO).
LYC_HYACE LYSOZYME PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - HYALOPHORA CECROPIA (CECROPIA MOTH).
LYC_HYLLA LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - HYLOBATES LAR (COMMON GIBBON).
LYC_HYPCU LYSOZYME PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - HYPHANTRIA CUNEA (FALL WEBWORM).
LYC_LOPCA LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - LOPHORTYX CALIFORNICA (CALIFORNIA QUAIL).
LYC_LOPLE LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - LOPHURA LEUCOMELANA (KALIJ PHEASANT).
LYC_MACMU LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - MACACA MULATTA (RHESUS MACAQUE).
LYC_MELGA LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - MELEAGRIS GALLOPAVO (COMMON TURKEY).
LYC_MIOTA LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - MIOPITHECUS TALAPOIN (TALAPOIN) (CERCOPITHECUS TALAPOIN).
LYC_NASLA LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - NASALIS LARVATUS (PROBOSCIS MONKEY).
LYC_NUMME LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - NUMIDA MELEAGRIS (HELMETED GUINEAFOWL).
LYC_OPIHO LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - OPISTHOCOMUS HOAZIN (HOATZIN).
LYC_ORTVE LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - ORTALIS VETULA (PLAIN CHACHALACA).
LYC_PAPAN LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - PAPIO ANUBIS (OLIVE BABOON), AND CERCOCEBUS TORQUATUS ATYS (RED-CROWNED MANGABEY) (SOOTY MANGABEY).
LYC_PAVCR LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - PAVO CRISTATUS (INDIAN PEAFOWL) (BLUE PEAFOWL).
LYC_PHACO LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - PHASIANUS COLCHICUS COLCHICUS (RING-NECKED PHEASANT).
LYC_PHAVE LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - PHASIANUS VERSICOLOR (GREEN PHEASANT).
LYC_PONPY LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - PONGO PYGMAEUS (ORANGUTAN).
LYC_PREEN LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - PRESBYTIS ENTELLUS (HANUMAN LANGUR), AND TRACHYPITHECUS VETULUS (PURPLE-FACED LANGUR).
LYC_PYGNE LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - PYGATHRIX NEMAEUS (DOVE LANGUR).
LYC_RABIT LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - ORYCTOLAGUS CUNICULUS (RABBIT).
LYC_SAGOE LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - SAGUINUS OEDIPUS (COTTON-TOP TAMARIN).
LYC_SAISC LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - SAIMIRI SCIUREUS (COMMON SQUIRREL MONKEY).
LYC_SHEEP LYSOZYME C 1A TO 4B (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - OVIS ARIES (SHEEP).
LYC_SYRRE LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - SYRMATICUS REEVESII (REEVES'S PHEASANT).
LYC_TRIVU LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - TRICHOSURUS VULPECULA (BRUSH-TAILED POSSUM).
O75951 LYSOZYME HOMOLOG - HOMO SAPIENS (HUMAN).
P87493 LYSOZYME C PRECURSOR - TRACHYPITHECUS FRANCOISI, AND TRACHYPITHECUS OBSCURUS.
Q06283 LYSOZYME - BOS TAURUS (BOVINE).
Q06284 LYSOZYME - BOS TAURUS (BOVINE).
Q06285 LYSOZYME - BOS TAURUS (BOVINE).
Q26363 LYSOZYME - MANDUCA SEXTA (TOBACCO HAWKMOTH) (TOBACCO HORNWORM).
Q27996 LYSOZYME - BOS TAURUS (BOVINE).
Q29447 LYSOZYME PRECURSOR (EC 3.2.1.17) (MURAMIDASE) - BOS TAURUS (BOVINE).

LCA_CAVPO ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - CAVIA PORCELLUS (GUINEA PIG).
LCA_HUMAN ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - HOMO SAPIENS (HUMAN).
LCA_MOUSE ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - MUS MUSCULUS (MOUSE).
LCA_PAPCY ALPHA-LACTALBUMIN (LACTOSE SYNTHASE B PROTEIN) - PAPIO CYNOCEPHALUS (YELLOW BABOON).
LCA_RAT ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - RATTUS NORVEGICUS (RAT).
LYC1_TACAC LYSOZYME C I (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - TACHYGLOSSUS ACULEATUS ACULEATUS (AUSTRALIAN ECHIDNA).
O02418 LYSOZYME - ANOPHELES DARLINGI.

LCA_MACEU ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - MACROPUS EUGENII (TAMMAR WALLABY).
LCA_MACRG ALPHA-LACTALBUMIN (LACTOSE SYNTHASE B PROTEIN) - MACROPUS RUFOGRISEUS (RED-NECKED WALLABY).
LYSS_DROME LYSOZYME S PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - DROSOPHILA MELANOGASTER (FRUIT FLY).

LYC_TRINI LYSOZYME PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - TRICHOPLUSIA NI (CABBAGE LOOPER).
LYSA_DROME LYSOZYME A PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - DROSOPHILA MELANOGASTER (FRUIT FLY).
LYSB_DROME LYSOZYME B/C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - DROSOPHILA MELANOGASTER (FRUIT FLY).
LYSD_DROME LYSOZYME D PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - DROSOPHILA MELANOGASTER (FRUIT FLY).
LYSE_DROME LYSOZYME E PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - DROSOPHILA MELANOGASTER (FRUIT FLY).
LYSP_DROME LYSOZYME P PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - DROSOPHILA MELANOGASTER (FRUIT FLY).
Scan History
OWL10_1    2  200  NSINGLE    
OWL17_1 1 245 NSINGLE
OWL18_0 1 300 NSINGLE
OWL19_1 1 300 NSINGLE
OWL26_0 2 200 NSINGLE
SPTR37_9f 4 200 NSINGLE
Initial Motifs
Motif 1  width=11
Element Seqn Id St Int Rpt
YRKCQASQILK LAKGAW 3 3 -
FTKCEVSHAIE LART2 3 3 -
IPRCELVKILR LZPY 3 3 -
FTKCELSQNLY LCA_PAPCY 3 3 -
LTRCELTEKLK LARB 3 3 -
YGRCELAAAMK !LCOT 3 3 -
FTKCELSEVLK LAHO 3 3 -
FGRCELAAAMK LZUH 3 3 -
FGRCELAAAMK LZQJEB 3 3 -
YDRCEFARILK LYC3_PIG 3 3 -
FERCELARTLK LYC_BOVIN 21 21 -
LTKCEAFQKLK LCA_SHEEP 22 22 -

Motif 2 width=10
Element Seqn Id St Int Rpt
YSLGNWVCAA !LCOT 23 9 -
YSLGNWVCAA LZUH 23 9 -
VTLPEWICTI LAHO 21 7 -
YSLGNWVCAA LZQJEB 23 9 -
ISMSEWICTL LARB 21 7 -
IALPELICTM LCA_PAPCY 21 7 -
KTVANWVCLV LZPY 23 9 -
VSLPEWTCVL LART2 21 7 -
IPLPELVCTM LAKGAW 21 7 -
VSLPEWVCTA LCA_SHEEP 40 7 -
VSLANWLCLT LYC_BOVIN 41 9 -
VSLANWVCLA LYC3_PIG 23 9 -

Motif 3 width=17
Element Seqn Id St Int Rpt
STDYGVLQINSRWWCND LZQJEB 50 17 -
STDYGIFQINSKWWCND LYC_BOVIN 69 18 -
STDYGIFQINSRYWCND LYC3_PIG 51 18 -
STEYGLFQINNKIWCKD LCA_SHEEP 66 16 -
STDYGVLQINSRWWCND LZUH 50 17 -
KTEYGLFQINNKMWCRD LAHO 47 16 -
STDYGILQINSRWWCND !LCOT 50 17 -
STEYGIFQINSKLWCVS LARB 47 16 -
STEYGLFQISNALWCKS LCA_PAPCY 47 16 -
SRDYGIFQINSKYWCND LZPY 50 17 -
STEYGLFQISNRDWCKE LART2 47 16 -
NKEYGIFQISNDGWCAE LAKGAW 47 16 -

Motif 4 width=10
Element Seqn Id St Int Rpt
SVCGILCSKF LAKGAW 71 7 -
NICDISCDKF LART2 71 7 -
NACNINCSKL LZPY 74 7 -
NICDITCDKF LCA_PAPCY 71 7 -
NICDTPCENF LARB 71 7 -
NLCNIPCSAL !LCOT 74 7 -
NICGISCDKF LAHO 71 7 -
NLCNIPCSAL LZUH 74 7 -
NLCNIPCSAL LZQJEB 74 7 -
NICNISCDKF LCA_SHEEP 90 7 -
DGCHVSCREL LYC_BOVIN 93 7 -
NACHISCKVL LYC3_PIG 75 7 -

Motif 5 width=16
Element Seqn Id St Int Rpt
LSSDITATVNCAKKIV LZQJEB 84 0 -
QSSDITATANCAKKIV LZUH 84 0 -
LDDDLTDDVMCAKKIL LAHO 81 0 -
LSSDITASVNCAKKIV !LCOT 84 0 -
LDDNLTDDVKCAMKIL LARB 81 0 -
LDDDITDDIMCAKKIL LCA_PAPCY 81 0 -
RDDNIADDIQCAKKIA LZPY 84 0 -
LDDELADDIVCAKKIV LART2 81 0 -
LDDDITDDIECAKKIL LAKGAW 81 0 -
LDDDLSQDIECAKRVV LYC3_PIG 85 0 -
MENDIAKAVACAKHIV LYC_BOVIN 103 0 -
LDDDLTDDIVCAKKIL LCA_SHEEP 100 0 -

Motif 6 width=12
Element Seqn Id St Int Rpt
GIDYWIAHKALC LCA_PAPCY 100 3 -
GIDHWLAHKPLC LARB 100 3 -
GMNAWVAWRNRC !LCOT 104 4 -
GIDYWLAHKPLC LAHO 100 3 -
GMNAWVAWRKHC LZUH 104 4 -
GMNAWVAWRNRC LZQJEB 104 4 -
GIKAWVAWKAHC LYC3_PIG 105 4 -
GITAWVAWKSHC LYC_BOVIN 122 3 -
GINYWLAHKALC LCA_SHEEP 119 3 -
GLGYWKAHETFC LAKGAW 101 4 -
GINYWLAHKPMC LART2 100 3 -
GLTPWVAWKKYC LZPY 104 4 -
Final Motifs
Motif 1  width=11
Element Seqn Id St Int Rpt
FERCELARTLK LYCK_SHEEP 3 3 -
FERCELARTLK LYC_PAPAN 21 21 -
FERCELARTLK LYC_MIOTA 21 21 -
FERCELARTLK LYC_MACMU 21 21 -
FERCELARTLK LYC_CERAE 21 21 -
FERCELARTLK P87493 21 21 -
FERCELARTLK LYC_PREEN 21 21 -
FERCELARTLK LYC_NASLA 21 21 -
YERCELARTLK LYC_RABIT 3 3 -
FERCELARTLK LYC_COLAN 21 21 -
FERCELARTLK LYC_SAISC 21 21 -
FERCELARTLK LYC_CALJA 21 21 -
FERCELARTLK LYC_SAGOE 21 21 -
FERCELARTLK LYC_PONPY 21 21 -
FERCELARTLK LYC_HUMAN 21 21 -
FERCELARTLK LYC_GORGO 21 21 -
FERCELARTLK LYC_ALLNI 21 21 -
FERCELARTLK LYC_PYGNE 21 21 -
FERCELARTLK LYC_HYLLA 21 21 -
YERCEFARTLK LYCM_MOUSE 21 21 -
FKRCELAKTLK Q27996 21 21 -
FERCELARSLK Q29447 21 21 -
YERCQFARTLK LYC1_RAT 21 21 -
YNRCELARILK LYCP_MOUSE 21 21 -
YGRCELAAAMK LYC_SYRRE 3 3 -
YDRCEFARILK LYC1_PIG 3 3 -
YDRCEFARILK LYC3_PIG 3 3 -
YGRCELAAAMK LYC_PHACO 21 21 -
YGRCELAAAMK LYC_PHAVE 4 4 -
FGRCELAAAMK LYC_CHICK 21 21 -
YGRCELAAAMK LYC_CHRAM 3 3 -
YGRCELAAAMK LYC_LOPLE 3 3 -
FERCELARTLK Q06283 21 21 -
FERCELARTLK Q06284 21 21 -
FERCELARTLK Q06285 21 21 -
YDRCEFARILK LYC2_PIG 21 21 -
YGRCELAAAMK LYC_COTJA 21 21 -
YGRCELAAAMK LYC_PAVCR 3 3 -
FERCELARTLK LYC_SHEEP 3 3 -
FERCELARTLK LYC1_CAPHI 3 3 -
FGRCELAAAMK LYC_COLVI 3 3 -
FGRCELAAAMK LYC_LOPCA 3 3 -
FERCELARTLK LYC2_CAPHI 3 3 -
FKHCELARILR LYC2_RAT 21 21 -
FERCELARTLK LYC_BOVIN 21 21 -
YGRCELAAAMK LYC_MELGA 21 21 -
YKRCELAAAMK LYC_ORTVE 3 3 -
WERCALARKLK LYC_CAMDR 3 3 -
YSRCELAAAMK LYC1_ANAPL 21 21 -
YERCELAAAMK LYC3_ANAPL 3 3 -
FGRCELAAAMK LYC_NUMME 3 3 -
FERCELARTLK LYC_AXIAX 3 3 -
YDRCELARALK LYC2_ONCMY 18 18 -
MERCEFARRIK LYC_TRIVU 21 21 -
FSKCELAHKLK LYC_EQUAS 3 3 -
FSKCELAHKLK LYC_HORSE 3 3 -
FGKCELAKALA LYC_ANOGA 23 23 -
FQICELSRVLK LCA_ORNAN 3 3 -
IPRCELVKILR LYC_COLLI 3 3 -
LTKCEAFQKLK LCA_SHEEP 22 22 -
LTKCEVFQKLK LCA_CAPHI 22 22 -
FTKCELSQVLK LCA_EQUAS 3 3 -
LTKCEVFRELK LCA_BOVIN 22 22 -
FTKCELSQVLK LCAA_HORSE 3 3 -
ISRCDLAQVLQ O75951 22 22 -
FTKCELSQVLK LCA_PIG 22 22 -
IPRCELVKILR LYC_OPIHO 22 22 -
FTKCQLSQVLK LCAB_HORSE 3 3 -
FTKCKLSDELK LCA_CAMDR 3 3 -
FSRCELVHELR Q26363 20 20 -
FTRCGLVHELR LYC_BOMMO 21 21 -
LTRCELTEKLK LCA_RABIT 3 3 -
STRCDLVRELR LYC_HYPCU 24 24 -
FTRCGLVQELR LYC_HYACE 22 22 -
YGKCELNQILR LCA_TRIVU 22 22 -

Motif 2 width=10
Element Seqn Id St Int Rpt
ISLANWMCLA LYCK_SHEEP 23 9 -
ISLANWVCLA LYC_PAPAN 41 9 -
ISLANWVCLA LYC_MIOTA 41 9 -
ISLANWVCLA LYC_MACMU 41 9 -
ISLANWVCLA LYC_CERAE 41 9 -
VSLANWVCLA P87493 41 9 -
VSLANWVCLA LYC_PREEN 41 9 -
VSLANWVCLA LYC_NASLA 41 9 -
VSLANWMCLA LYC_RABIT 23 9 -
VSLANWVCLA LYC_COLAN 41 9 -
ISLANWMCLA LYC_SAISC 41 9 -
ISLANWMCLA LYC_CALJA 41 9 -
ISLANWMCLA LYC_SAGOE 41 9 -
ISLANWMCLA LYC_PONPY 41 9 -
ISLANWMCLA LYC_HUMAN 41 9 -
ISLANWMCLA LYC_GORGO 41 9 -
ISLANWVCLA LYC_ALLNI 41 9 -
VSLANWVCLA LYC_PYGNE 41 9 -
ISLANWMCLA LYC_HYLLA 41 9 -
VSLADWVCLA LYCM_MOUSE 41 9 -
VSLANWMCLA Q27996 41 9 -
ISLANWMCLA Q29447 41 9 -
VSLADWVCLA LYC1_RAT 41 9 -
VKLADWVCLA LYCP_MOUSE 41 9 -
YSLGNWVCAA LYC_SYRRE 23 9 -
VSLANWVCLA LYC1_PIG 23 9 -
VSLANWVCLA LYC3_PIG 23 9 -
YSLGNWVCAA LYC_PHACO 41 9 -
YSLGNWVCAA LYC_PHAVE 24 9 -
YSLGNWVCAA LYC_CHICK 41 9 -
YSLGNWVCAA LYC_CHRAM 23 9 -
YSLGNWVCAA LYC_LOPLE 23 9 -
VSLANWLCLT Q06283 41 9 -
VSLANWLCLT Q06284 41 9 -
VSLANWLCLT Q06285 41 9 -
VSLANWVCLA LYC2_PIG 41 9 -
YSLGNWVCAA LYC_COTJA 41 9 -
YSLGNWVCAA LYC_PAVCR 23 9 -
VSLANWLCLT LYC_SHEEP 23 9 -
VSLANWLCLT LYC1_CAPHI 23 9 -
YSLGNWVCAA LYC_COLVI 23 9 -
YSLGNWVCAA LYC_LOPCA 23 9 -
VSLANWLCLT LYC2_CAPHI 23 9 -
VSLENWMCMA LYC2_RAT 41 9 -
VSLANWLCLT LYC_BOVIN 41 9 -
YSLGNWVCAA LYC_MELGA 41 9 -
YSLGNWVCAA LYC_ORTVE 23 9 -
VSLANWMCLT LYC_CAMDR 23 9 -
YSLGNWVCAA LYC1_ANAPL 41 9 -
YSLGNWVCAA LYC3_ANAPL 23 9 -
YSLGNWVCAA LYC_NUMME 23 9 -
VSLANWLCLT LYC_AXIAX 23 9 -
NSLPNWVCLS LYC2_ONCMY 38 9 -
ISLANWVCLA LYC_TRIVU 41 9 -
YSLANWVCMA LYC_EQUAS 23 9 -
YSLANWVCMA LYC_HORSE 23 9 -
ASLPDWVCLV LYC_ANOGA 40 6 -
VSLEEWLCVI LCA_ORNAN 23 9 -
KTVANWVCLV LYC_COLLI 23 9 -
VSLPEWVCTA LCA_SHEEP 40 7 -
VSLPEWVCTA LCA_CAPHI 40 7 -
VTLPEWICTI LCA_EQUAS 21 7 -
VSLPEWVCTT LCA_BOVIN 40 7 -
VTLPEWICTI LCAA_HORSE 21 7 -
YSLSDWLCLA O75951 42 9 -
ITLPEWICTI LCA_PIG 40 7 -
TTIADWICLV LYC_OPIHO 42 9 -
VTLPEWICTI LCAB_HORSE 21 7 -
ITLAEWICII LCA_CAMDR 21 7 -
NLMRDWVCLV Q26363 37 6 -
NLMRNWVCLV LYC_BOMMO 38 6 -
ISMSEWICTL LCA_RABIT 21 7 -
NQMGDWVCLV LYC_HYPCU 41 6 -
TLMSNWVCLV LYC_HYACE 39 6 -
ISLPELICTM LCA_TRIVU 40 7 -

Motif 3 width=17
Element Seqn Id St Int Rpt
STDYGIFQINSHWWCND LYCK_SHEEP 51 18 -
STDYGIFQINSHYWCNN LYC_PAPAN 69 18 -
STDYGIFQINSHYWCNN LYC_MIOTA 69 18 -
STDYGIFQINSHYWCNN LYC_MACMU 69 18 -
STDYGIFQINSHYWCNN LYC_CERAE 69 18 -
STDYGIFQINSRYWCNN P87493 69 18 -
STDYGIFQINSRYWCNN LYC_PREEN 69 18 -
STDYGIFQINSRYWCNN LYC_NASLA 69 18 -
STDYGIFQINSRYWCND LYC_RABIT 51 18 -
STDYGIFQINSRYWCNN LYC_COLAN 69 18 -
STDYGIFQINSHYWCNN LYC_SAISC 69 18 -
STDYGIFQINSHYWCNN LYC_CALJA 69 18 -
STDYGIFQINSHYWCNN LYC_SAGOE 69 18 -
STDYGIFQINSRYWCND LYC_PONPY 69 18 -
STDYGIFQINSRYWCND LYC_HUMAN 69 18 -
STDYGIFQINSRYWCND LYC_GORGO 69 18 -
STDYGIFQINSHYWCNN LYC_ALLNI 69 18 -
STDYGIFQINSRYWCNN LYC_PYGNE 69 18 -
STDYGIFQINSRYWCND LYC_HYLLA 69 18 -
STDYGIFQINSRYWCND LYCM_MOUSE 69 18 -
STDYGIFQINSKWWCND Q27996 69 18 -
STDYGIFQINSHWWCND Q29447 69 18 -
STDYGIFQINSRYWCND LYC1_RAT 69 18 -
STDYGIFQINSRYWCND LYCP_MOUSE 69 18 -
STDYGILQINSRWWCND LYC_SYRRE 50 17 -
STDYGIFQINSRYWCND LYC1_PIG 49 16 -
STDYGIFQINSRYWCND LYC3_PIG 51 18 -
STDYGILQINSRWWCND LYC_PHACO 68 17 -
STDYGILQINSRWWCND LYC_PHAVE 51 17 -
STDYGILQINSRWWCND LYC_CHICK 68 17 -
STDYGILQINSRWWCND LYC_CHRAM 50 17 -
STDYGILQINSRWWCND LYC_LOPLE 50 17 -
STDYGIFQINSKWWCND Q06283 69 18 -
STDYGIFQINSKWWCND Q06284 69 18 -
STDYGIFQINSKWWCND Q06285 69 18 -
STDYGIFQINSRYWCND LYC2_PIG 67 16 -
STDYGILQINSRWWCND LYC_COTJA 68 17 -
STDYGILQINSRWWCND LYC_PAVCR 50 17 -
STDYGIFQINSKWWCND LYC_SHEEP 51 18 -
STDYGIFQINSKFWCND LYC1_CAPHI 51 18 -
STDYGVLQINSRWWCND LYC_COLVI 50 17 -
STDYGVLQINSRWWCND LYC_LOPCA 50 17 -
STDYGIFQINSKFWCND LYC2_CAPHI 51 18 -
STDYGIFQINSRYWCND LYC2_RAT 69 18 -
STDYGIFQINSKWWCND LYC_BOVIN 69 18 -
STDYGILQINSRWWCND LYC_MELGA 68 17 -
STDYGILQINSRWWCND LYC_ORTVE 50 17 -
STDYGIFQINSRYWCNN LYC_CAMDR 51 18 -
STDYGILQINSRWWCDN LYC1_ANAPL 68 17 -
STDYGILEINSRWWCDN LYC3_ANAPL 50 17 -
STDYGVLQINSRWWCND LYC_NUMME 50 17 -
STDYGIFQINSKWWCDD LYC_AXIAX 51 18 -
STDYGIFQINSRYWCDD LYC2_ONCMY 65 17 -
STDYGILQINSHYWCDD LYC_TRIVU 69 18 -
SYDYGLFQLNSKWWCKD LYC_EQUAS 51 18 -
SSDYGLFQLNNKWWCKD LYC_HORSE 51 18 -
STDYGIFQINNKYWCDS LYC_ANOGA 67 17 -
SSSHGLFQINQPYWCDD LCA_ORNAN 49 16 -
SRDYGIFQINSKYWCND LYC_COLLI 50 17 -
STEYGLFQINNKIWCKD LCA_SHEEP 66 16 -
STEYGLFQINNKIWCKD LCA_CAPHI 66 16 -
KTEYGLFQINNKMWCRD LCA_EQUAS 47 16 -
STEYGLFQINNKIWCKD LCA_BOVIN 66 16 -
KTEYGLFQINNKMWCRD LCAA_HORSE 47 16 -
SFDYGLFQINSHYWCND O75951 69 17 -
STEYGLFQINNKLWCRD LCA_PIG 66 16 -
SRDYGIFQINSKYWCND LYC_OPIHO 68 16 -
KTEYGLFEINNKMWCRD LCAB_HORSE 47 16 -
NREYGLFQINNKIWCRD LCA_CAMDR 47 16 -
SRDYGLFQINDKYWCSN Q26363 65 18 -
SKDYGLFQINDRYWCSK LYC_BOMMO 65 17 -
STEYGIFQINSKLWCVS LCA_RABIT 47 16 -
SKDYGLFQINDKYWCSN LYC_HYPCU 69 18 -
SRDYGLFQINDKYWCSK LYC_HYACE 67 18 -
HKEYGIFQISSNGWCAE LCA_TRIVU 66 16 -

Motif 4 width=10
Element Seqn Id St Int Rpt
NACHIPCSAL LYCK_SHEEP 75 7 -
NACHISCNAL LYC_PAPAN 93 7 -
NACHISCNAL LYC_MIOTA 93 7 -
NACHISCNAL LYC_MACMU 93 7 -
NACHISCNAL LYC_CERAE 93 7 -
DACHISCSAL P87493 93 7 -
DACHISCSAL LYC_PREEN 93 7 -
DACHISCSAL LYC_NASLA 93 7 -
NACHIPCSDL LYC_RABIT 75 7 -
NACHISCNAL LYC_COLAN 93 7 -
NACHISCNAL LYC_SAISC 93 7 -
NACHISCNAL LYC_CALJA 93 7 -
NACHISCNAL LYC_SAGOE 93 7 -
NACHLSCSAL LYC_PONPY 93 7 -
NACHLSCSAL LYC_HUMAN 93 7 -
NACHLSCSAL LYC_GORGO 93 7 -
NACRISCNAL LYC_ALLNI 93 7 -
DACHISCSAL LYC_PYGNE 93 7 -
NACHLSCNAL LYC_HYLLA 93 7 -
NACGINCSAL LYCM_MOUSE 93 7 -
NGCGVSCSAL Q27996 93 7 -
NACHLPCGAL Q29447 93 7 -
NACGIPCSAL LYC1_RAT 93 7 -
NACGINCSAL LYCP_MOUSE 93 7 -
NLCHISCSAL LYC_SYRRE 74 7 -
NACHISCKVL LYC1_PIG 73 7 -
NACHISCKVL LYC3_PIG 75 7 -
NLCHIPCSAL LYC_PHACO 92 7 -
NLCHIPCSAL LYC_PHAVE 75 7 -
NLCNIPCSAL LYC_CHICK 92 7 -
NLCHIPCSAL LYC_CHRAM 74 7 -
NLCHIPCSAL LYC_LOPLE 74 7 -
DGCHVSCSEL Q06283 93 7 -
DGCHVSCSEL Q06284 93 7 -
DGCHVSCSEL Q06285 93 7 -
NACHISCKVL LYC2_PIG 91 7 -
NLCNIPCSAL LYC_COTJA 92 7 -
NLCNIPCSAL LYC_PAVCR 74 7 -
DGCHVSCSEL LYC_SHEEP 75 7 -
DGCHVSCSEL LYC1_CAPHI 75 7 -
NLCNIPCSAL LYC_COLVI 74 7 -
NLCNIPCSAL LYC_LOPCA 74 7 -
DGCHVSCSEL LYC2_CAPHI 75 7 -
NACGIPCSAL LYC2_RAT 93 7 -
DGCHVSCREL LYC_BOVIN 93 7 -
NLCNIPCSAL LYC_MELGA 92 7 -
NLCHISCSAL LYC_ORTVE 74 7 -
NGCGINCNVL LYC_CAMDR 75 7 -
NACGIPCSVL LYC1_ANAPL 92 7 -
NACGIPCSVL LYC3_ANAPL 74 7 -
NLCNIPCSAL LYC_NUMME 74 7 -
DGCHVACSEL LYC_AXIAX 75 7 -
NVCGIRCSQL LYC2_ONCMY 89 7 -
NECKVRCSEL LYC_TRIVU 93 7 -
NACNIMCSKL LYC_EQUAS 74 6 -
NACNIMCSKL LYC_HORSE 74 6 -
NDCKIACKNL LYC_ANOGA 88 4 -
NACQIPCSKL LCA_ORNAN 76 10 -
NACNINCSKL LYC_COLLI 74 7 -
NICNISCDKF LCA_SHEEP 90 7 -
NICNISCDKF LCA_CAPHI 90 7 -
NICGISCNKF LCA_EQUAS 71 7 -
NICNISCDKF LCA_BOVIN 90 7 -
NICGISCDKF LCAA_HORSE 71 7 -
NLCHVDCQDL O75951 92 6 -
NICGISCDKF LCA_PIG 89 6 -
DGCHISCSEL LYC_OPIHO 92 7 -
NICGISCNKF LCAB_HORSE 71 7 -
NICDISCDKF LCA_CAMDR 71 7 -
KDCNVKCSDL Q26363 87 5 -
KDCNVKCSDL LYC_BOMMO 87 5 -
NICDTPCENF LCA_RABIT 71 7 -
KDCNVTCADL LYC_HYPCU 91 5 -
KDCNVTCNQL LYC_HYACE 89 5 -
SVCGILCSKL LCA_TRIVU 90 7 -

Motif 5 width=16
Element Seqn Id St Int Rpt
LQDDITQAVACAKRVV LYCK_SHEEP 85 0 -
LQDNIADAVTCAKRVV LYC_PAPAN 103 0 -
LQDNIADAVTCAKRVV LYC_MIOTA 103 0 -
LQDNIADAVTCAKRVV LYC_MACMU 103 0 -
LQDNIADAVTCAKRVV LYC_CERAE 103 0 -
LQNNIADAVACAKRVV P87493 103 0 -
LQNNIADAVACAKRVV LYC_PREEN 103 0 -
LQNNIADAVACAKRVV LYC_NASLA 103 0 -
LKDDITQAVACAKRVV LYC_RABIT 85 0 -
LQNNIADAVACAKRVV LYC_COLAN 103 0 -
LQDDITQAVACAKRVV LYC_SAISC 103 0 -
LQDDITEAVACAKRVV LYC_CALJA 103 0 -
LQDDITEAVACAKRVV LYC_SAGOE 103 0 -
LQDNIADAVACAKRVV LYC_PONPY 103 0 -
LQDNIADAVACAKRVV LYC_HUMAN 103 0 -
LQDNIADAVACAKRVV LYC_GORGO 103 0 -
LQDNIADAVTCAKRVV LYC_ALLNI 103 0 -
LQNNIADAVACAKRVV LYC_PYGNE 103 0 -
LQDNIADAVACAKRVV LYC_HYLLA 103 0 -
LQDDITAAIQCAKRVV LYCM_MOUSE 103 0 -
LKDDITQAVACAKKIV Q27996 103 0 -
LQDDITQAVACTKRDV Q29447 103 0 -
LQDDITQAIQCAKRVV LYC1_RAT 103 0 -
LQDDITAAIQCAKRVV LYCP_MOUSE 103 0 -
LSSDITASVNCAKKIV LYC_SYRRE 84 0 -
LDDDLSQDIECAKRVV LYC1_PIG 83 0 -
LDDDLSQDIECAKRVV LYC3_PIG 85 0 -
LSSDITASVNCAKKIV LYC_PHACO 102 0 -
LSSDITASVNCAKKIV LYC_PHAVE 85 0 -
LSSDITASVNCAKKIV LYC_CHICK 102 0 -
LSSDITASVNCAKKIV LYC_CHRAM 84 0 -
LSSDITASVNCAKKIV LYC_LOPLE 84 0 -
MENDIAKAVACAKHIV Q06283 103 0 -
MENDIAKAVACAKHIV Q06284 103 0 -
MENDIAKAVACAKQIV Q06285 103 0 -
LDDDLSQDIECAKRVV LYC2_PIG 101 0 -
LSSDITASVNCAKKIV LYC_COTJA 102 0 -
LSSDITASVNCAKKIV LYC_PAVCR 84 0 -
MENNIAKAVACAKHIV LYC_SHEEP 85 0 -
MENDIEKAVACAKHIV LYC1_CAPHI 85 0 -
LSSDITATVNCAKKIV LYC_COLVI 84 0 -
LSSDITATVNCAKKIV LYC_LOPCA 84 0 -
MENNIAKAVACAKQIV LYC2_CAPHI 85 0 -
LQDDITQAIQCAKRVV LYC2_RAT 103 0 -
MENDIAKAVACAKHIV LYC_BOVIN 103 0 -
LSSDITASVNCAKKIA LYC_MELGA 102 0 -
MGADIAPSVRCAKRIV LYC_ORTVE 84 0 -
LEDDITKAVQCAKRVV LYC_CAMDR 85 0 -
LRSDITEAVRCAKRIV LYC1_ANAPL 102 0 -
LRSDITEAVKCAKRIV LYC3_ANAPL 84 0 -
QSSDITATANCAKKIV LYC_NUMME 84 0 -
MENNIDKAVTCAKQIV LYC_AXIAX 85 0 -
LTADLTVAIRCAKRVV LYC2_ONCMY 99 0 -
QEDDLVKAVNCAKKIV LYC_TRIVU 103 0 -
LDDNIDDDISCAKRVV LYC_EQUAS 84 0 -
LDENIDDDISCAKRVV LYC_HORSE 84 0 -
LNDDITDDIKCAKLIH LYC_ANOGA 98 0 -
LDDDILDDIECAKKIV LCA_ORNAN 86 0 -
RDDNIADDIQCAKKIA LYC_COLLI 84 0 -
LDDDLTDDIVCAKKIL LCA_SHEEP 100 0 -
LDDDLTDDIVCAKKIL LCA_CAPHI 100 0 -
LDDDLTDDVMCAKKIL LCA_EQUAS 81 0 -
LDDDLTDDIMCVKKIL LCA_BOVIN 100 0 -
LDDDLTDDVMCAKKIL LCAA_HORSE 81 0 -
LNPNLLAGIHCAKRIV O75951 102 0 -
LDDDLTDDMMCAKKIL LCA_PIG 99 0 -
MTNDLEDDIKCAKKIA LYC_OPIHO 102 0 -
LDDDLTDDVMCAKKDL LCAB_HORSE 81 0 -
LDDDLTDDKMCAKKIL LCA_CAMDR 81 0 -
LIDDITKASTCAKKIY Q26363 97 0 -
LTDDITKAAKCAKKIY LYC_BOMMO 97 0 -
LDDNLTDDVKCAMKIL LCA_RABIT 81 0 -
LLDDITKASTCAKKIF LYC_HYPCU 101 0 -
LTDDISVAATCAKKIY LYC_HYACE 99 0 -
LDDDITDDIVCAKKIL LCA_TRIVU 100 0 -

Motif 6 width=12
Element Seqn Id St Int Rpt
GIRAWVAWRSHC LYCK_SHEEP 105 4 -
GIRAWVAWRNHC LYC_PAPAN 123 4 -
GIRAWVAWRNHC LYC_MIOTA 123 4 -
GIRAWVAWRNHC LYC_MACMU 123 4 -
GIRAWVAWRNHC LYC_CERAE 123 4 -
GIRAWVAWRNHC P87493 123 4 -
GIRAWVAWRNHC LYC_PREEN 123 4 -
GIRAWVAWRNHC LYC_NASLA 123 4 -
GIRAWVAWRNHC LYC_RABIT 105 4 -
GIRAWVAWKKHC LYC_COLAN 123 4 -
GIRAWVAWKAHC LYC_SAISC 123 4 -
GIRAWVAWKAHC LYC_CALJA 123 4 -
GIRAWVAWKAHC LYC_SAGOE 123 4 -
GIRAWVAWRNRC LYC_PONPY 123 4 -
GIRAWVAWRNRC LYC_HUMAN 123 4 -
GIRAWVAWRNRC LYC_GORGO 123 4 -
GIRAWVAWRNHC LYC_ALLNI 123 4 -
GVRAWVAWRNHC LYC_PYGNE 123 4 -
GIRAWVAWRNRC LYC_HYLLA 123 4 -
GIRAWVAWRAHC LYCM_MOUSE 123 4 -
GITAWVAWKNKC Q27996 122 3 -
GIRAWVAWRSHC Q29447 123 4 -
GIRAWVAWQRHC LYC1_RAT 123 4 -
GIRAWVAWRTQC LYCP_MOUSE 123 4 -
GMNAWVAWRNRC LYC_SYRRE 104 4 -
GIKAWVAWRTHC LYC1_PIG 103 4 -
GIKAWVAWKAHC LYC3_PIG 105 4 -
GMNAWVAWRKHC LYC_PHACO 122 4 -
GMNAWVAWRKHC LYC_PHAVE 105 4 -
GMNAWVAWRNRC LYC_CHICK 122 4 -
GMNAWVAWRNRC LYC_CHRAM 104 4 -
GMNAWVAWRNRC LYC_LOPLE 104 4 -
GITAWVAWKSHC Q06283 122 3 -
GITAWVAWKSHC Q06284 122 3 -
GITAWVAWKSHC Q06285 122 3 -
GVKAWVAWRAHC LYC2_PIG 121 4 -
GMNAWVAWRNRC LYC_COTJA 122 4 -
GMNAWVAWRNRC LYC_PAVCR 104 4 -
GITAWVAWKSHC LYC_SHEEP 104 3 -
GITAWVAWKSHC LYC1_CAPHI 104 3 -
GMNAWVAWRNRC LYC_COLVI 104 4 -
GMNAWVAWRNRC LYC_LOPCA 104 4 -
GITAWVAWKSHC LYC2_CAPHI 104 3 -
GIRAWVAWQRHC LYC2_RAT 123 4 -
GITAWVAWKSHC LYC_BOVIN 122 3 -
GMNAWVAWRNRC LYC_MELGA 122 4 -
GMNAWVAWRKHC LYC_ORTVE 104 4 -
GVRAWVAWKNHC LYC_CAMDR 105 4 -
GMNAWVAWRNRC LYC1_ANAPL 122 4 -
GMNAWVAWRNRC LYC3_ANAPL 104 4 -
GMNAWVAWRKHC LYC_NUMME 104 4 -
GITAWVAWKSHC LYC_AXIAX 104 3 -
GIGAWVAWRLHC LYC2_ONCMY 119 4 -
GIRAWVAWRNKC LYC_TRIVU 122 3 -
GMSAWKAWVKHC LYC_EQUAS 104 4 -
GMSAWKAWVKHC LYC_HORSE 104 4 -
GFNAWYGWKNHC LYC_ANOGA 117 3 -
GITAWEAWQPFC LCA_ORNAN 106 4 -
GLTPWVAWKKYC LYC_COLLI 104 4 -
GINYWLAHKALC LCA_SHEEP 119 3 -
GINYWLAHKALC LCA_CAPHI 119 3 -
GIDYWLAHKPLC LCA_EQUAS 100 3 -
GINYWLAHKALC LCA_BOVIN 119 3 -
GIDYWLAHKPLC LCAA_HORSE 100 3 -
GMNNWVEWRLHC O75951 122 4 -
GIDYWLAHKALC LCA_PIG 118 3 -
GLTPWYGWKNHC LYC_OPIHO 122 4 -
GIDYWLAHKPLC LCAB_HORSE 100 3 -
GIDYWLAHKPLC LCA_CAMDR 100 3 -
KFQAWYGWRNHC Q26363 116 3 -
RFDAWYGWKNHC LYC_BOMMO 116 3 -
GIDHWLAHKPLC LCA_RABIT 100 3 -
NFRAWYGWRNHC LYC_HYPCU 120 3 -
KFDAWYGWKNHC LYC_HYACE 118 3 -
RLDHWKAHNTFC LCA_TRIVU 120 4 -