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PR00126

Identifier
ATPASEGAMMA  [View Relations]  [View Alignment]  
Accession
PR00126
No. of Motifs
4
Creation Date
01-NOV-1994  (UPDATE 13-JUN-1999)
Title
ATP synthase gamma subunit signature
Database References

PROSITE; PS00153 ATPASE_GAMMA
INTERPRO; IPR000131
Literature References
1. FUTAI, M., NOUMI, T. AND MAEDA, M.
ATP synthase (H+-ATPase) - Results by combined biochemical and 
molecular biological approaches.
ANNU.REV.BIOCHEMISTRY 58 111-136 (1989).
 
2. SENIOR, A.E.
ATP synthesis by oxidative phosphorylation.
PHYSIOL.REV. 68 177-231 (1988).
 
3. MIKI, J., MAEDA, M., MUKOHATA, Y. AND FUTAI, M.
The gamma-subunit of ATP synthase from spinach chloroplasts - primary
structure deduced from the cloned cDNA sequence.
FEBS LETT. 232 221-226 (1988).

Documentation
ATP synthase (proton-translocating ATPase) is a component of the cyto-
plasmic membrane of eubacteria, the inner membrane of mitochondria, and
the thylakoid membrane of chloroplasts [1,2]. The ATPase complex contains
an oligomeric transmembrane portion (CF0), which acts as a proton channel,
and a catalytic core (coupling factor CF1), which contains 5 subunits
(designated alpha to epsilon).
 
The catalytic core gamma subunit is thought to be important in the
regulation of ATPase activity and the flow of protons through the CF0
complex. A well-conserved region in the C-terminus [3] appears to be
essential for assembly and catalysis. 
 
ATPASEGAMMA is a 4-element fingerprint that provides a signature for the
ATP synthase catalytic core gamma subunits. The fingerprint was derived
from an initial alignment of 6 sequences: the motifs were drawn from
conserved regions spanning virtually the full alignment length, motif 4
including the region encoded by PROSITE pattern ATPASE_GAMMA (PS00153),
which lies at the C-terminus. Two iterations on OWL24.0 were required to
reach convergence, at which point a true set comprising 28 sequences
was identified. A single partial match was also found, which fails to
make significant matches with motifs 2 and 4.
 
An update on SPTR37_9f identified a true set of 50 sequences, and 5
partial matches.
Summary Information
  50 codes involving  4 elements
5 codes involving 3 elements
0 codes involving 2 elements
Composite Feature Index
450505050
34452
20000
1234
True Positives
ATP1_ARATH    ATP2_ARATH    ATP3_ARATH    ATP3_IPOBA    
ATPG_ACEWO ATPG_ANASP ATPG_BACCA ATPG_BACFI
ATPG_BACME ATPG_BACP3 ATPG_BACST ATPG_BACSU
ATPG_BOVIN ATPG_BUCAP ATPG_CHLRE ATPG_ECOLI
ATPG_ENTHR ATPG_HAEIN ATPG_HELPY ATPG_HUMAN
ATPG_KLULA ATPG_MYCLE ATPG_MYCTU ATPG_ODOSI
ATPG_PEA ATPG_PHATR ATPG_PROMO ATPG_RAT
ATPG_RHOBL ATPG_RHOCA ATPG_RHORU ATPG_RICPR
ATPG_SPIOL ATPG_STRLI ATPG_STRMU ATPG_SYNP1
ATPG_SYNP6 ATPG_SYNY3 ATPG_THIFE ATPG_TOBAC
ATPG_VIBAL ATPG_YEAST O05432 O21267
O32279 O50141 O50158 O67829
O74754 Q52412
True Positive Partials
Codes involving 3 elements
ATPG_MYCGA ATPG_MYCGE ATPG_MYCPN ATPG_SPIPL
O31084
Sequence Titles
ATP1_ARATH  ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLAST PRECURSOR (EC 3.6.1.34) - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS). 
ATP2_ARATH ATP SYNTHASE GAMMA CHAIN 2, CHLOROPLAST PRECURSOR (EC 3.6.1.34) - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).
ATP3_ARATH ATP SYNTHASE GAMMA CHAIN, MITOCHONDRIAL PRECURSOR (EC 3.6.1.34) - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).
ATP3_IPOBA ATP SYNTHASE GAMMA CHAIN, MITOCHONDRIAL PRECURSOR (EC 3.6.1.34) - IPOMOEA BATATAS (SWEET POTATO) (BATATE).
ATPG_ACEWO ATP SYNTHASE GAMMA CHAIN, SODIUM ION SPECIFIC (EC 3.6.1.37) (NA(+)-TRANSLOCATING ATPASE GAMMA CHAIN) - ACETOBACTERIUM WOODII.
ATPG_ANASP ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - ANABAENA SP. (STRAIN PCC 7120).
ATPG_BACCA ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - BACILLUS CALDOTENAX.
ATPG_BACFI ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - BACILLUS FIRMUS.
ATPG_BACME ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - BACILLUS MEGATERIUM.
ATPG_BACP3 ATP SYNTHASE GAMMA CHAIN PRECURSOR (EC 3.6.1.34) - BACILLUS PS3 (THERMOPHILIC BACTERIUM PS-3).
ATPG_BACST ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - BACILLUS STEAROTHERMOPHILUS.
ATPG_BACSU ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - BACILLUS SUBTILIS.
ATPG_BOVIN ATP SYNTHASE GAMMA CHAIN, MITOCHONDRIAL PRECURSOR (EC 3.6.1.34) - BOS TAURUS (BOVINE).
ATPG_BUCAP ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - BUCHNERA APHIDICOLA.
ATPG_CHLRE ATP SYNTHASE GAMMA CHAIN, CHLOROPLAST PRECURSOR (EC 3.6.1.34) - CHLAMYDOMONAS REINHARDTII.
ATPG_ECOLI ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - ESCHERICHIA COLI.
ATPG_ENTHR ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - ENTEROCOCCUS HIRAE.
ATPG_HAEIN ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - HAEMOPHILUS INFLUENZAE.
ATPG_HELPY ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - HELICOBACTER PYLORI (CAMPYLOBACTER PYLORI).
ATPG_HUMAN ATP SYNTHASE GAMMA CHAIN, MITOCHONDRIAL PRECURSOR (EC 3.6.1.34) - HOMO SAPIENS (HUMAN).
ATPG_KLULA ATP SYNTHASE GAMMA CHAIN, MITOCHONDRIAL PRECURSOR (EC 3.6.1.34) - KLUYVEROMYCES LACTIS (YEAST).
ATPG_MYCLE ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - MYCOBACTERIUM LEPRAE.
ATPG_MYCTU ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - MYCOBACTERIUM TUBERCULOSIS.
ATPG_ODOSI ATP SYNTHASE GAMMA CHAIN, CHLOROPLAST PRECURSOR (EC 3.6.1.34) - ODONTELLA SINENSIS.
ATPG_PEA ATP SYNTHASE GAMMA CHAIN, CHLOROPLAST PRECURSOR (EC 3.6.1.34) - PISUM SATIVUM (GARDEN PEA).
ATPG_PHATR ATP SYNTHASE GAMMA CHAIN, CHLOROPLAST PRECURSOR (EC 3.6.1.34) - PHAEODACTYLUM TRICORNUTUM.
ATPG_PROMO ATP SYNTHASE GAMMA CHAIN, SODIUM ION SPECIFIC (EC 3.6.1.37) - PROPIONIGENIUM MODESTUM.
ATPG_RAT ATP SYNTHASE GAMMA CHAIN, MITOCHONDRIAL (EC 3.6.1.34) - RATTUS NORVEGICUS (RAT).
ATPG_RHOBL ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - RHODOPSEUDOMONAS BLASTICA.
ATPG_RHOCA ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - RHODOBACTER CAPSULATUS (RHODOPSEUDOMONAS CAPSULATA).
ATPG_RHORU ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - RHODOSPIRILLUM RUBRUM.
ATPG_RICPR ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - RICKETTSIA PROWAZEKII.
ATPG_SPIOL ATP SYNTHASE GAMMA CHAIN, CHLOROPLAST PRECURSOR (EC 3.6.1.34) - SPINACIA OLERACEA (SPINACH).
ATPG_STRLI ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - STREPTOMYCES LIVIDANS.
ATPG_STRMU ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - STREPTOCOCCUS MUTANS.
ATPG_SYNP1 ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - SYNECHOCOCCUS SP. (STRAIN PCC 6716).
ATPG_SYNP6 ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - SYNECHOCOCCUS SP. (STRAIN PCC 6301).
ATPG_SYNY3 ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - SYNECHOCYSTIS SP. (STRAIN PCC 6803).
ATPG_THIFE ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - THIOBACILLUS FERROOXIDANS.
ATPG_TOBAC ATP SYNTHASE GAMMA CHAIN, CHLOROPLAST PRECURSOR (EC 3.6.1.34) - NICOTIANA TABACUM (COMMON TOBACCO).
ATPG_VIBAL ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - VIBRIO ALGINOLYTICUS.
ATPG_YEAST ATP SYNTHASE GAMMA CHAIN, MITOCHONDRIAL PRECURSOR (EC 3.6.1.34) - SACCHAROMYCES CEREVISIAE (BAKER'S YEAST).
O05432 ATP SYNTHASE SUBUNIT GAMMA - MOORELLA THERMOACETICA (CLOSTRIDIUM THERMOACETICUM).
O21267 ATP SYNTHASE F1 SUBUNIT ALPHA - RECLINOMONAS AMERICANA.
O32279 ATP SYNTHASE (SUBUNIT GAMMA) (EC 3.6.1.34) - BACILLUS SUBTILIS.
O50141 PROTON-TRANSLOCATING ATPASE, GAMMA SUBUNIT - RUMINOCOCCUS ALBUS.
O50158 PROTON-TRANSLOCATING ATPASE, GAMMA SUBUNIT - STREPTOCOCCUS BOVIS.
O67829 ATP SYNTHASE F1 GAMMA SUBUNIT - AQUIFEX AEOLICUS.
O74754 ATP SYNTHASE GAMMA CHAIN, MITOCHONDRIAL PRECURSOR - SCHIZOSACCHAROMYCES POMBE (FISSION YEAST).
Q52412 TF1-GAMMA SUBUNIT - THERMOPHILIC BACTERIUM PS3.

ATPG_MYCGA ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - MYCOPLASMA GALLISEPTICUM.
ATPG_MYCGE ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - MYCOPLASMA GENITALIUM.
ATPG_MYCPN ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - MYCOPLASMA PNEUMONIAE.
ATPG_SPIPL ATP SYNTHASE GAMMA CHAIN (EC 3.6.1.34) - SPIRULINA PLATENSIS.
O31084 ATP SYNTHASE GAMMA SUBUNIT C-TERMINUS HOMOLOG - METHANOSARCINA BARKERI.
Scan History
OWL24_0    2  50   NSINGLE    
SPTR37_9f 2 100 NSINGLE
Initial Motifs
Motif 1  width=20
Element Seqn Id St Int Rpt
VKKVALMVVTGDRGLCGGFN ATPG_SPIOL 115 115 -
VKKVALVVVTGDRGLCGGFN ATP1_ARATH 124 124 -
VKRVALVVVTGDKGLCGGFN ATP2_ARATH 134 134 -
VKSVGLLVISGDRGLCGGYN ATPG_ANASP 75 75 -
AKRVGYIIVSTDRGLCGGLN ATPG_VIBAL 73 73 -
VKKNVIITISSDKGLCGGIN ATP3_IPOBA 105 105 -

Motif 2 width=18
Element Seqn Id St Int Rpt
DKVEMLYTKFVSLVKSDP ATPG_SPIOL 208 73 -
DKVELLYTKFVSLVKSEP ATP1_ARATH 217 73 -
DKVELVYTKFVSLVKSDP ATP2_ARATH 228 74 -
DRIELVYTRFVSLVSSRP ATPG_ANASP 168 73 -
DRLYVVFNKFVNTMVQQP ATPG_VIBAL 166 73 -
DALRIVFNKFQSVVSFVP ATP3_IPOBA 197 72 -

Motif 3 width=20
Element Seqn Id St Int Rpt
ESLASELAARMTAMSNATDN ATPG_SPIOL 310 84 -
ESLASELAARMSAMSSASDN ATP1_ARATH 319 84 -
ESLASELASRMNAMSNATDN ATP2_ARATH 330 84 -
ESAASELAARMTAMSNASEN ATPG_ANASP 261 75 -
ENLACEQAARMIAMKAATDN ATPG_VIBAL 235 51 -
ENACSEQGARMSAMDSSSRN ATP3_IPOBA 271 56 -

Motif 4 width=22
Element Seqn Id St Int Rpt
YNRARQAKITGEILEIVAGANA ATPG_SPIOL 341 11 -
YNRKRQAKITGEILEIVAGANA ATP1_ARATH 350 11 -
YNRARQAKITGELLEIVAGAEA ATP2_ARATH 361 11 -
YNKARQAAITQELLEVVGGAEA ATPG_ANASP 292 11 -
YNKARQAAITQELSEIVGGAAA ATPG_VIBAL 266 11 -
YNRTRQASITTELIEIISGASA ATP3_IPOBA 302 11 -
Final Motifs
Motif 1  width=20
Element Seqn Id St Int Rpt
VKKTAYLVITSDRGLAGAFN O32279 73 73 -
VKKTAYLVITSDRGLAGAFN ATPG_BACSU 76 76 -
VKTVALLVVTGDRGLCGGYN ATPG_SYNP1 75 75 -
VKKTGYIVITSDRGLAGAYN ATPG_BACME 73 73 -
VKKTGYLVITSDRGLAGAYN Q52412 70 70 -
VKKTGYLVITSDRGLAGAYN ATPG_BACP3 74 74 -
VKKVALVVVTGDRGLCGGFN ATPG_TOBAC 128 128 -
VKKVALMVVTGDRGLCGGFN ATPG_SPIOL 115 115 -
VKKVALVVVTGDRGLCGGFN ATP1_ARATH 124 124 -
VKKTGYLVITSDRGLAGAYN ATPG_BACCA 73 73 -
VKKTGYLVITSDRGLAGAYN ATPG_BACST 73 73 -
PKAVALLVVTGDRGLCGGYN ATPG_SYNY3 75 75 -
VKRVALVVVTGDKGLCGGFN ATP2_ARATH 134 134 -
VKSVGLLVISGDRGLCGGYN ATPG_ANASP 75 75 -
VKKVTLLVITGDRGLCGGYN ATPG_PHATR 130 130 -
VKKTGYIVVTSDKGLAGGYN ATPG_BACFI 73 73 -
VKTVALLVVSGDRGLCGGYN ATPG_SYNP6 75 75 -
VKRIGIIVMTSDRGLCGGFN ATPG_PROMO 73 73 -
VKSVLLVVLTGDRGLCGGYN ATPG_CHLRE 108 108 -
VKRVGYLVVSTDRGLCGGLN ATPG_ECOLI 73 73 -
VSKVTLVVITGDRGLCGGYN ATPG_ODOSI 130 130 -
VKKVALVVCTGDRGLCGGFN ATPG_PEA 125 125 -
VKKIGILVISTDRGMCGGLN ATPG_HAEIN 73 73 -
VKKTAYIIITGDKGLAGGYN ATPG_ACEWO 73 73 -
VKKAGYVLITADRGLAGGYN O05432 73 73 -
DQIHLLVVMTSERGLCGGFN ATPG_RHOBL 74 74 -
AKRVGYIIVSTDRGLCGGLN ATPG_VIBAL 73 73 -
VKKTGYIVITSDKGLVGGYN O50158 76 76 -
PKRAGVLVVSSDRGLCGAYN ATPG_MYCTU 74 74 -
DKRIGIIIVSTDRGLCGSLN ATPG_BUCAP 73 73 -
PKRAGVLVVSSDRGLCGAYN ATPG_MYCLE 74 74 -
DNVHLIVALTANRGLCGGFN ATPG_RHORU 76 76 -
KNSVLLIVIAGDRGLAGGFN O50141 72 72 -
VKKAGFLVVTTDRGLCGGLN ATPG_THIFE 73 73 -
VKKNVIITISSDKGLCGGIN ATP3_IPOBA 105 105 -
VKKTGYIVITADGGLVGGYN ATPG_ENTHR 85 85 -
KKKHLLIGVSSDRGLCGAIH ATPG_HUMAN 88 88 -
KKKHLIIGVSSDRGLCGAIH ATPG_BOVIN 88 88 -
VKKSVVVTLSSDKGLCGGIN ATP3_ARATH 102 102 -
KKKHLIIGVSSDRGLCGAIH ATPG_RAT 63 63 -
IKKTAYIVITSDKGLVGAYN ATPG_STRMU 76 76 -
VNNKIVVPISSDRGLCGGIN O21267 66 66 -
PSRAAVLLLTSDRGLAGAFN ATPG_STRLI 71 71 -
DKVHLLVIMTGERGLCGGFN ATPG_RHOCA 76 76 -
IKKVDIIFITADKGLCGGFN ATPG_HELPY 81 81 -
SKINLLIVMTSERGLCGMFN ATPG_RICPR 77 77 -
EGKTLMVACSSDKGLCGGIH O74754 93 93 -
EKKDLIIAITSDKGLCGSIH ATPG_KLULA 81 81 -
ERNVDVILVTADRGLAGAFN O67829 75 75 -
APKELIVAITSDKGLCGSIH ATPG_YEAST 102 102 -

Motif 2 width=18
Element Seqn Id St Int Rpt
DELHLVYNHFVSAITQEV O32279 166 73 -
DELHLVYNHFVSAITQEV ATPG_BACSU 169 73 -
DRVELIYTKFVSLISSKP ATPG_SYNP1 168 73 -
DELYLYYNHFINTISQEV ATPG_BACME 166 73 -
DELYMYYNHYVSAIQQEV Q52412 163 73 -
DELYMYYNHYVSAIQQEV ATPG_BACP3 167 73 -
DKVELLYTKFVSLVKSEP ATPG_TOBAC 221 73 -
DKVEMLYTKFVSLVKSDP ATPG_SPIOL 208 73 -
DKVELLYTKFVSLVKSEP ATP1_ARATH 217 73 -
DELYMYYNHYVSAIQQEV ATPG_BACCA 167 74 -
DELYMYYNHYVSAIQQEV ATPG_BACST 167 74 -
DRVELIYTRFVSLISSQP ATPG_SYNY3 168 73 -
DKVELVYTKFVSLVKSDP ATP2_ARATH 228 74 -
DRIELVYTRFVSLVSSRP ATPG_ANASP 168 73 -
DAVELLYTKFVSLIASSP ATPG_PHATR 222 72 -
DELYVWYNHFVSPITQDV ATPG_BACFI 166 73 -
DRVELVYTKFLSLVASNP ATPG_SYNP6 168 73 -
DEVYLIYNEFISALSTEL ATPG_PROMO 164 71 -
DKVELVFTKFISLINSNP ATPG_CHLRE 201 73 -
DKLYIVSNKFINTMSQVP ATPG_ECOLI 166 73 -
DAVELLYTKFISLIASSP ATPG_ODOSI 222 72 -
DKVELLYTKFVSLVKSNP ATPG_PEA 218 73 -
DAVYIAYNKFVNTMSQKP ATPG_HAEIN 166 73 -
DEVYIAYTKFVSTITQHA ATPG_ACEWO 162 69 -
DEVNLINTRFYSPIRQVP O05432 163 70 -
DVVTIFYNRFQSVISQVP ATPG_RHOBL 169 75 -
DRLYVVFNKFVNTMVQQP ATPG_VIBAL 166 73 -
DELYVCYNHHVNSLTSQV O50158 168 72 -
DELHIVYTEFKSMLSQSA ATPG_MYCTU 180 86 -
DRLFIAYNKFHNKLSQYP ATPG_BUCAP 166 73 -
DELHIVFTEFKSMLSQST ATPG_MYCLE 173 79 -
DVCTLVYNRFQSAISQVV ATPG_RHORU 171 75 -
DAVELVYTTFVSVMTQEP O50141 165 73 -
DVVYLVSSRFVNTMLQRA ATPG_THIFE 166 73 -
DALRIVFNKFQSVVSFVP ATP3_IPOBA 197 72 -
DELYVCYNHHINSLTSQF ATPG_ENTHR 178 73 -
DEGSIIFNKFRSVISYKT ATPG_HUMAN 181 73 -
DEGSIIFNRFRSVISYKT ATPG_BOVIN 181 73 -
DALRIVYNKFHSVVAFLP ATP3_ARATH 194 72 -
DEGSIIFNQFKSVISYKT ATPG_RAT 156 73 -
DELYVCYSHHINSLTSQV ATPG_STRMU 169 73 -
DTCYLVYNQFRSVLTQNV O21267 157 71 -
DELHIVYTEFVSMMTQTA ATPG_STRLI 168 77 -
DVATIFFSVFQSVISQVP ATPG_RHOCA 171 75 -
DKVIIIHNGFKNMITQEI ATPG_HELPY 174 73 -
SNCIIYFNKFKNAMTQIP ATPG_RICPR 170 73 -
DRIVLVYNKFASAVSFET O74754 185 72 -
KKVSIFWNDPISSLSFEP ATPG_KLULA 171 70 -
DRVYLINNEMVTRASYKP O67829 169 74 -
PKISIFYNDPVSSLSFEP ATPG_YEAST 193 71 -

Motif 3 width=20
Element Seqn Id St Int Rpt
DSKASEHAARMTAMKNATDN O32279 233 49 -
DSKASEHAARMTAMKNATDN ATPG_BACSU 236 49 -
EAAASELAARMTAMNNASDN ATPG_SYNP1 261 75 -
DGKASEHAARMTAMKSATDN ATPG_BACME 231 47 -
DAKASEHAARMTAMKNATDN Q52412 228 47 -
DAKASEHAARMTAMKNATDN ATPG_BACP3 232 47 -
ESLASELAARMSAMSSATDN ATPG_TOBAC 323 84 -
ESLASELAARMTAMSNATDN ATPG_SPIOL 310 84 -
ESLASELAARMSAMSSASDN ATP1_ARATH 319 84 -
DAKASEHAARMTAMKNATDN ATPG_BACCA 233 48 -
DAKASEHAARMTAMKNATDN ATPG_BACST 233 48 -
ESAASELAARMTAMSNASDN ATPG_SYNY3 261 75 -
ESLASELASRMNAMSNATDN ATP2_ARATH 330 84 -
ESAASELAARMTAMSNASEN ATPG_ANASP 261 75 -
ESVASELAARMQSMQSASDN ATPG_PHATR 316 76 -
DAKASEFGARMTAMSAATDN ATPG_BACFI 235 51 -
EAAASELAARMTAMNSASDN ATPG_SYNP6 261 75 -
ENTASEHSARKNAMKNATDN ATPG_PROMO 228 46 -
EALASELAARMNAMNNASDN ATPG_CHLRE 303 84 -
ENLASEQAARMVAMKAATDN ATPG_ECOLI 234 50 -
ESVASELAARMQSMQSASDN ATPG_ODOSI 316 76 -
ESLASELAARMSAMSSAFDN ATPG_PEA 320 84 -
DNVASEQAARMVAMKAATDN ATPG_HAEIN 236 52 -
ESAASEQGARRTAMESATTN ATPG_ACEWO 247 67 -
EAKASEHGARMTAMDNATKN O05432 228 47 -
ENAASEQGARMSAMDNATRN ATPG_RHOBL 233 46 -
ENLACEQAARMIAMKAATDN ATPG_VIBAL 235 51 -
DAKTAEHAAGMTAMQTATDN O50158 237 51 -
ESAASELASRQRAMKSATDN ATPG_MYCTU 248 50 -
ENIASEQAARMVAMKTATDN ATPG_BUCAP 235 51 -
ESAASELASRQRAMKSATDN ATPG_MYCLE 241 50 -
ESFASEQGARMTAMDNATRN ATPG_RHORU 246 57 -
DSFASEQAARRTAMESASDN O50141 231 48 -
EHLACEQSARMVAMKSASDN ATPG_THIFE 235 51 -
ENACSEQGARMSAMDSSSRN ATP3_IPOBA 271 56 -
DAKTAEHAAGMTAMKTATDN ATPG_ENTHR 246 50 -
ESTTSEQSARMTAMDNASKN ATPG_HUMAN 244 45 -
ESTTSEQSARMTAMDNASKN ATPG_BOVIN 244 45 -
ENACSEMGARMSAMDSSSRN ATP3_ARATH 268 56 -
ESTTSEQSARMTAMDNASKN ATPG_RAT 219 45 -
DAKTAEHAAGMTAMQTATDN ATPG_STRMU 238 51 -
ENVTSEQGARMNAMDNAAKN O21267 223 48 -
QSAASKHAATRRAMKSATDN ATPG_STRLI 240 54 -
ENNASFNGAQMSAMDNATRN ATPG_RHOCA 237 48 -
DSLAAEHSARMQAMDTATNN ATPG_HELPY 247 55 -
QNIVSEEGARMTAMENATNN ATPG_RICPR 235 47 -
EAHCSEMSSRRNAMENASKS O74754 247 44 -
EGYAAEVSARRNAMDNASKN ATPG_KLULA 235 46 -
ESNAAEHFARMIAMDNATKN O67829 235 48 -
QGYAAEISARRNAMDNASKN ATPG_YEAST 257 46 -

Motif 4 width=22
Element Seqn Id St Int Rpt
YNRARQAAITQEITEIVGGAAA O32279 264 11 -
YNRARQAAITQEITEIVGGAAA ATPG_BACSU 267 11 -
YNKARQAAITQEILEVVAGAEA ATPG_SYNP1 292 11 -
YNRARQAAITQEITEIVGGAAA ATPG_BACME 262 11 -
YNRARQAAITQEITEIVAGANA Q52412 259 11 -
YNRARQAAITQEITEIVAGANA ATPG_BACP3 263 11 -
YNRQRQAKITGEILEIVAGADA ATPG_TOBAC 354 11 -
YNRARQAKITGEILEIVAGANA ATPG_SPIOL 341 11 -
YNRKRQAKITGEILEIVAGANA ATP1_ARATH 350 11 -
YNRARQAAITQEITEIVAGRNA ATPG_BACCA 264 11 -
YNRARQAAITQEITEIVAGRNA ATPG_BACST 264 11 -
YNKARQAAITQELLEVVAGANS ATPG_SYNY3 292 11 -
YNRARQAKITGELLEIVAGAEA ATP2_ARATH 361 11 -
YNKARQAAITQELLEVVGGAEA ATPG_ANASP 292 11 -
YNRARQAAVTQELLEIISGASA ATPG_PHATR 347 11 -
FNRARQAAITQEITEIVGGAAA ATPG_BACFI 266 11 -
YNKARQAAITQELLEVVAGAEA ATPG_SYNP6 292 11 -
YNRERQAAITQEISEIVSGASA ATPG_PROMO 259 11 -
YNKQRQAKITQELAEIVGGAAA ATPG_CHLRE 334 11 -
YNKARQASITQELTEIVSGAAA ATPG_ECOLI 265 11 -
YNRARQAAVTQEILEIVSGASA ATPG_ODOSI 347 11 -
YNRATQAKITGEILEIVAGDIE ATPG_PEA 351 11 -
YNKARQASITNELNEIVAGAAA ATPG_HAEIN 267 11 -
YNRVRQAPITQEISEIVGGAED ATPG_ACEWO 278 11 -
FNRARQAAITNEIVEIVAGADA O05432 259 11 -
YNRSRQAAITKELIEIISGAEA ATPG_RHOBL 264 11 -
YNKARQAAITQELSEIVGGAAA ATPG_VIBAL 266 11 -
YNRARQAAITQEITEIVAGANA O50158 268 11 -
ANRERQAQITQEISEIVGGANA ATPG_MYCTU 279 11 -
YNKVRQANITQELTEIVAGASA ATPG_BUCAP 266 11 -
ANRERQAQITQEISEIVGGANA ATPG_MYCLE 272 11 -
YNRTRQAQITKELIEIISGAEA ATPG_RHORU 277 11 -
YNRARQAQITQEITEISSASLN O50141 262 11 -
YNKARQAAITQEIAEISAGAAR ATPG_THIFE 266 11 -
YNRTRQASITTELIEIISGASA ATP3_IPOBA 302 11 -
YNRARQGAITQEITEIVAGASA ATPG_ENTHR 277 11 -
FNRTRQAVITKELIEIISGAAA ATPG_HUMAN 275 11 -
FNRTRQAVITKELIEIISGAAA ATPG_BOVIN 275 11 -
YNRTRQASITTELIEIISGASA ATP3_ARATH 299 11 -
FNRTRQAVITKELIEIISGAAA ATPG_RAT 250 11 -
YNRVRQAAITQEITEIVAGANA ATPG_STRMU 269 11 -
YNKARQASITSELIEIISCASA O21267 254 11 -
ANAARQAEITQEISEIVGGASA ATPG_STRLI 271 11 -
YNRSRQAAITKELIEIISGAEA ATPG_RHOCA 268 11 -
YNKARQEAITTELVEINAGVEA ATPG_HELPY 278 11 -
LNRSRQTIITTELIEIIAGAEA ATPG_RICPR 266 11 -
YNRQRQASITNELIDIVTGANS O74754 278 11 -
YNRTRQAVITNELVDIITGASS ATPG_KLULA 266 11 -
FNKARQEAITTELIDITNAVEA O67829 266 11 -
YNRTRQAVITNELVDIITGASS ATPG_YEAST 288 11 -