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PR00125

Identifier
ATPASEDELTA  [View Relations]  [View Alignment]  
Accession
PR00125
No. of Motifs
5
Creation Date
02-NOV-1994  (UPDATE 27-JUN-1999)
Title
ATP synthase delta subunit signature
Database References

PROSITE; PS00389 ATPASE_DELTA
PFAM; PF00213 OSCP
INTERPRO; IPR000711
Literature References
1. FUTAI, M., NOUMI, T. AND MAEDA, M.
ATP synthase (H+-ATPase) - Results by combined biochemical and 
molecular biological approaches.
ANNU.REV.BIOCHEMISTRY 58 111-136 (1989).
 
2. SENIOR, A.E.
ATP synthesis by oxidative phosphorylation.
PHYSIOL.REV. 68 177-231 (1988).
 
3. ENGELBRECHT, S. AND JUNGE, W.
Subunit-delta of H+-ATPases - At the interface between proton flow and
ATP synthesis.
BIOCHIM.BIOPHYS.ACTA 1015 379-390 (1990).

Documentation
ATP synthase (proton-translocating ATPase) is a component of the cyto-
plasmic membrane of eubacteria, the inner membrane of mitochondria, and
the thylakoid membrane of chloroplasts [1,2]. The ATPase complex contains
an oligomeric transmembrane portion (CF0), which acts as a proton channel,
and a catalytic core (coupling factor CF1), which contains 5 subunits
(designated alpha to epsilon).
 
The catalytic core delta subunit (referred to as oligomycin sensitivity
conferral protein, OSCP, in mitochondria) appears to be part of the stalk 
that links CF0 and CF1, in which context it either transmits conformational
changes from CF0 into CF1, or is implicated in proton conduction [3]. Delta
subunits contain around 200 amino acids, the proteins from different
sources exhibiting only moderate sequence similarity.
 
ATPASEDELTA is a 5-element fingerprint that provides a signature for the
ATP synthase catalytic core delta subunits. The fingerprint was derived
from an initial alignment of 12 sequences: the motifs were drawn from
conserved regions spanning virtually the full alignment length, motifs 
4 and 5 including the region encoded by PROSITE pattern ATPASE_DELTA
(PS00389), which lies at the C-terminus. Two iterations on OWL24.0 were
required to reach convergence, at which point a true set comprising 26
sequences was identified. Two partial matches were also found, which
lack significant matches with one or more motifs.
 
An update on SPTR37_9f identified a true set of 40 sequences, and 22
partial matches.
Summary Information
  40 codes involving  5 elements
2 codes involving 4 elements
5 codes involving 3 elements
5 codes involving 2 elements
Composite Feature Index
54040404040
422022
342045
210054
12345
True Positives
ATPD_ANASP    ATPD_ANTSP    ATPD_BACCA    ATPD_BACFI    
ATPD_BACME ATPD_BACST ATPD_BACSU ATPD_CHLRE
ATPD_CYACA ATPD_CYAPA ATPD_ECOLI ATPD_ENTHR
ATPD_GUITH ATPD_HAEIN ATPD_OCHNE ATPD_ODOSI
ATPD_PEA ATPD_PORPU ATPD_PROMO ATPD_RHOBL
ATPD_RHOCA ATPD_RHORU ATPD_SORBI ATPD_SPIOL
ATPD_SYNP1 ATPD_SYNP6 ATPD_SYNY3 ATPD_TOBAC
ATPD_VIBAL ATPO_BOVIN ATPO_HUMAN ATPO_IPOBA
ATPO_RAT ATPO_YEAST O05430 O50139
O74190 O74479 P91283 Q24439
True Positive Partials
Codes involving 4 elements
ATPD_BACP3 ATPD_THIFE
Codes involving 3 elements
ATPD_BUCAP ATPD_MYCTU ATPD_STRBO ATPD_STRMU
ATPO_ARATH
Codes involving 2 elements
ATPD_MYCGA ATPD_MYCGE ATPD_MYCLE ATPD_STRLI
O67527
Sequence Titles
ATPD_ANASP  ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - ANABAENA SP. (STRAIN PCC 7120). 
ATPD_ANTSP ATP SYNTHASE DELTA CHAIN, CHLOROPLAST (EC 3.6.1.34) - ANTITHAMNION SP.
ATPD_BACCA ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - BACILLUS CALDOTENAX.
ATPD_BACFI ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - BACILLUS FIRMUS.
ATPD_BACME ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - BACILLUS MEGATERIUM.
ATPD_BACST ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - BACILLUS STEAROTHERMOPHILUS.
ATPD_BACSU ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - BACILLUS SUBTILIS.
ATPD_CHLRE ATP SYNTHASE DELTA CHAIN, CHLOROPLAST PRECURSOR (EC 3.6.1.34) - CHLAMYDOMONAS REINHARDTII.
ATPD_CYACA ATP SYNTHASE DELTA CHAIN, CHLOROPLAST (EC 3.6.1.34) - CYANIDIUM CALDARIUM (GALDIERIA SULPHURARIA).
ATPD_CYAPA ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - CYANOPHORA PARADOXA.
ATPD_ECOLI ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - ESCHERICHIA COLI.
ATPD_ENTHR ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - ENTEROCOCCUS HIRAE.
ATPD_GUITH ATP SYNTHASE DELTA CHAIN, CHLOROPLAST (EC 3.6.1.34) - GUILLARDIA THETA (CRYPTOMONAS PHI).
ATPD_HAEIN ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - HAEMOPHILUS INFLUENZAE.
ATPD_OCHNE ATP SYNTHASE DELTA CHAIN, CHLOROPLAST (EC 3.6.1.34) - OCHROSPHAERA NEAPOLITANA.
ATPD_ODOSI ATP SYNTHASE DELTA CHAIN, CHLOROPLAST (EC 3.6.1.34) - ODONTELLA SINENSIS.
ATPD_PEA ATP SYNTHASE DELTA CHAIN, CHLOROPLAST PRECURSOR (EC 3.6.1.34) - PISUM SATIVUM (GARDEN PEA).
ATPD_PORPU ATP SYNTHASE DELTA CHAIN, CHLOROPLAST (EC 3.6.1.34) - PORPHYRA PURPUREA.
ATPD_PROMO ATP SYNTHASE DELTA CHAIN, SODIUM ION SPECIFIC (EC 3.6.1.37) - PROPIONIGENIUM MODESTUM.
ATPD_RHOBL ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - RHODOPSEUDOMONAS BLASTICA.
ATPD_RHOCA ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - RHODOBACTER CAPSULATUS (RHODOPSEUDOMONAS CAPSULATA).
ATPD_RHORU ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - RHODOSPIRILLUM RUBRUM.
ATPD_SORBI ATP SYNTHASE DELTA CHAIN, CHLOROPLAST PRECURSOR (EC 3.6.1.34) - SORGHUM BICOLOR MILO (SORGHUM).
ATPD_SPIOL ATP SYNTHASE DELTA CHAIN, CHLOROPLAST PRECURSOR (EC 3.6.1.34) - SPINACIA OLERACEA (SPINACH).
ATPD_SYNP1 ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - SYNECHOCOCCUS SP. (STRAIN PCC 6716).
ATPD_SYNP6 ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - SYNECHOCOCCUS SP. (STRAIN PCC 6301).
ATPD_SYNY3 ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - SYNECHOCYSTIS SP. (STRAIN PCC 6803).
ATPD_TOBAC ATP SYNTHASE DELTA CHAIN, CHLOROPLAST PRECURSOR (EC 3.6.1.34) - NICOTIANA TABACUM (COMMON TOBACCO).
ATPD_VIBAL ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - VIBRIO ALGINOLYTICUS.
ATPO_BOVIN ATP SYNTHASE OLIGOMYCIN SENSITIVITY CONFERRAL PROTEIN PRECURSOR, MITOCHONDRIAL (EC 3.6.1.34) (OSCP) - BOS TAURUS (BOVINE).
ATPO_HUMAN ATP SYNTHASE OLIGOMYCIN SENSITIVITY CONFERRAL PROTEIN PRECURSOR, MITOCHONDRIAL (EC 3.6.1.34) (OSCP) - HOMO SAPIENS (HUMAN).
ATPO_IPOBA ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL PRECURSOR (EC 3.6.1.34) (OLIGOMYCIN SENSITIVITY CONFERRAL PROTEIN) (OSCP) - IPOMOEA BATATAS (SWEET POTATO) (BATATE).
ATPO_RAT ATP SYNTHASE OLIGOMYCIN SENSITIVITY CONFERRAL PROTEIN PRECURSOR, MITOCHONDRIAL (EC 3.6.1.34) (OSCP) - RATTUS NORVEGICUS (RAT).
ATPO_YEAST ATP SYNTHASE OLIGOMYCIN SENSITIVITY CONFERRAL PROTEIN PRECURSOR, MITOCHONDRIAL (EC 3.6.1.34) (OSCP) (ATP SYNTHASE CHAIN 5) - SACCHAROMYCES CEREVISIAE (BAKER'S YEAST).
O05430 ATP SYNTHASE SUBUNIT DELTA - MOORELLA THERMOACETICA (CLOSTRIDIUM THERMOACETICUM).
O50139 PROTON-TRANSLOCATING ATPASE, DELTA SUBUNIT - RUMINOCOCCUS ALBUS.
O74190 OLIGOMYCIN SENSITIVITY CONFERRING PROTEIN - KLUYVEROMYCES LACTIS (YEAST).
O74479 ATP SYNTHASE DELTA CHAIN FAMILY, OLIGOMYCIN SENSITIVITY CONFERRING PROTEIN - SCHIZOSACCHAROMYCES POMBE (FISSION YEAST).
P91283 SIMILAR TO ATPASE DELTA CHAIN FAMILY - CAENORHABDITIS ELEGANS.
Q24439 OLIGOMYCIN SENSITIVITY CONFERRING PROTEIN PRECURSOR - DROSOPHILA MELANOGASTER (FRUIT FLY).

ATPD_BACP3 ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - BACILLUS PS3 (THERMOPHILIC BACTERIUM PS-3).
ATPD_THIFE ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - THIOBACILLUS FERROOXIDANS.

ATPD_BUCAP ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - BUCHNERA APHIDICOLA.
ATPD_MYCTU ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - MYCOBACTERIUM TUBERCULOSIS.
ATPD_STRBO ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - STREPTOCOCCUS BOVIS.
ATPD_STRMU ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - STREPTOCOCCUS MUTANS.
ATPO_ARATH ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL PRECURSOR (EC 3.6.1.34) (OLIGOMYCIN SENSITIVITY CONFERRAL PROTEIN) (OSCP) - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).

ATPD_MYCGA ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - MYCOPLASMA GALLISEPTICUM.
ATPD_MYCGE ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - MYCOPLASMA GENITALIUM.
ATPD_MYCLE ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - MYCOBACTERIUM LEPRAE.
ATPD_STRLI ATP SYNTHASE DELTA CHAIN (EC 3.6.1.34) - STREPTOMYCES LIVIDANS.
O67527 ATP SYNTHASE F1 DELTA CHAIN - AQUIFEX AEOLICUS.
Scan History
OWL24_0    2  610  NSINGLE    
SPTR37_9f 4 500 NSINGLE
Initial Motifs
Motif 1  width=20
Element Seqn Id St Int Rpt
IAERYATALFELSKETGALK ATPD_RHOBL 11 11 -
VSGNYASALYLAAVKSNTLE ATPO_IPOBA 65 65 -
VARPYAKAAFDFAVEHQSVE ATPD_ECOLI 7 7 -
IEGRYATALYSAASKQKRLD ATPO_RAT 37 37 -
VEGTYATALYQAAAKNSSID ATPO_YEAST 32 32 -
VAERYATALYELAEDRGALD ATPD_RHORU 11 11 -
VAKRYALALFQLATEKQMID ATPD_BACME 6 6 -
IAAPYARALFDFSVDQNLMH ATPD_ODOSI 10 10 -
IAKRYASALFQIALEQGQLD ATPD_THEP3 6 6 -
VGRRYGKALFELAIDSNSAE ATPD_ENTFA 8 8 -
VAQPYAQALLSIAKSKSLTE ATPD_ANASP 10 10 -
IARPYAKAAFDFALEKDQLD ATPD_VIBAL 7 7 -
LFDPYAEALMAIAREQGLED ATPD_SYNP6 7 7 -

Motif 2 width=12
Element Seqn Id St Int Rpt
QNFLLILAENGR ATPO_IPOBA 135 50 -
ANLMNLLAENGR ATPO_RAT 106 49 -
VNLLKVLSENNR ATPO_YEAST 103 51 -
KNFLEVVYSYNR ATPD_ENTFA 76 48 -
QNTLLLLLERHR ATPD_THEP3 74 48 -
FKFLIVLVNRSR ATPD_ODOSI 79 49 -
QHTVLLLLERHR ATPD_BACME 74 48 -
RNFLGVVAAKHR ATPD_RHORU 81 50 -
RNFLLLLVDKRR ATPD_ANASP 78 48 -
QNLLKVMAENGR ATPD_VIBAL 74 47 -
LNFLNLLVDRNR ATPD_SYNP6 76 49 -
TNTLALMSEKRR ATPD_RHOBL 81 50 -
QNLIRVMAENGR ATPD_ECOLI 74 47 -

Motif 3 width=15
Element Seqn Id St Int Rpt
RSFAVPGMIGAFLER ATPD_RHORU 92 -1 -
RFGLVPELAGTVSRP ATPD_THEP3 85 -1 -
RMSELSFMIDEYEHR ATPD_ENTFA 87 -1 -
RIFFLPEILQQYLAL ATPD_ANASP 89 -1 -
RLAALPDVCTEFYTL ATPD_VIBAL 85 -1 -
RIAFLDGIADRYQAL ATPD_SYNP6 87 -1 -
RLFALPQVLSALAGL ATPD_RHOBL 92 -1 -
RLKHIDRIVKRFKEL ATPO_IPOBA 146 -1 -
RLNALPDVLEQFIHL ATPD_ECOLI 85 -1 -
RLGNTQGVISAFSTI ATPO_RAT 117 -1 -
RLGCFEKIASDFGVL ATPO_YEAST 114 -1 -
RIQIVSEMVKEYRFL ATPD_BACME 85 -1 -
RINLLEPIIASYLNL ATPD_ODOSI 90 -1 -

Motif 4 width=16
Element Seqn Id St Int Rpt
HTLNISNIVDKTVIGG ATPD_BACME 136 36 -
REIRLVITVDSSLIGG ATPD_ODOSI 141 36 -
QTLEIENIIDPELIGG ATPD_THEP3 137 37 -
RQVELATKVDSDLIGG ATPD_ANASP 140 36 -
RKVKLNCSVDETLLGG ATPD_VIBAL 135 35 -
QTVELKQIVDSSIIGG ATPD_ENTFA 138 36 -
AGVEIESQVDADLLGG ATPD_SYNP6 138 36 -
KTVKLNTTVDESLIGG ATPD_RHOBL 142 35 -
KSVQIEQKIDPTILGG ATPO_IPOBA 198 37 -
RKVKLNCKIDKSVMAG ATPD_ECOLI 135 35 -
QILNLEVKTDPSIMGG ATPO_RAT 169 37 -
KSLKLENVVKPEIKGG ATPO_YEAST 168 39 -
NTVTIDASVDPALLGG ATPD_RHORU 142 35 -

Motif 5 width=19
Element Seqn Id St Int Rpt
GLIVELGDKTVDLSISTKI ATPO_YEAST 183 -1 -
GVKLRIGNRIYDGSISSKL ATPD_BACME 151 -1 -
GFLIKTNSKVLDFTIKNQL ATPD_ODOSI 156 -1 -
GVIIKVGSQVIDSSIRGQL ATPD_ANASP 155 -1 -
GAIVEANHRVIDGSIRTQL ATPD_ENTFA 153 -1 -
GVNVRIGNRIYDGSVSGQL ATPD_THEP3 152 -1 -
GVIIRAGDLVIDDSARGRL ATPD_VIBAL 150 -1 -
GVIIKVGSQVLDASLRGQL ATPD_SYNP6 153 -1 -
GLIVKLGSTMIDTSVKSKL ATPD_RHOBL 157 -1 -
GLVVEFGQKVFDMSIRTRA ATPO_IPOBA 213 -1 -
GVIIRAGDMVIDGSVRGRL ATPD_ECOLI 150 -1 -
GMIVRIGEKYVDMSAKSKI ATPO_RAT 184 -1 -
GMVVRVGSRMVDSSLSTKL ATPD_RHORU 157 -1 -
Final Motifs
Motif 1  width=20
Element Seqn Id St Int Rpt
VAQPYAQALLSIAKSKSLTE ATPD_ANASP 10 10 -
IAQPYASALLDLANEKKAIE ATPD_PORPU 10 10 -
IADAYAEALLELANSNKSLK ATPD_OCHNE 6 6 -
IAKRYASALFQIALEQQQLD ATPD_BACST 6 6 -
IARPYAKAAFDFALEKDQLD ATPD_VIBAL 7 7 -
IAEPYAQALIGLAQQQNLTE ATPD_SYNY3 10 10 -
VSESYAKALVELADEKGKLE ATPD_CHLRE 38 38 -
LVEPYAEALLSLAQSHNLAD ATPD_SYNP1 9 9 -
IANPYADALLELSLLNNAMD ATPD_ANTSP 9 9 -
LFDPYAEALMAIAREQGLED ATPD_SYNP6 7 7 -
IAERYATALFELSKETGALK ATPD_RHOBL 11 11 -
IEGRYATALYSAASKQNKLE ATPO_BOVIN 37 37 -
IEGRYATALYSAASKQNKLE ATPO_HUMAN 37 37 -
IAKVYAEGLFEIANTKNSLA ATPD_CYACA 7 7 -
IAKRYASALFQIALEQGQLD ATPD_BACCA 6 6 -
VSGNYASALYLAAVKSNTLE ATPO_IPOBA 65 65 -
VARRYARALFNIAREQGTAG O05430 6 6 -
VARPYAKAAFDFAVEHQSVE ATPD_ECOLI 7 7 -
IEGRYATALYSAASKQKRLD ATPO_RAT 37 37 -
ITQPYAEALLEMAQKYDIVE ATPD_CYAPA 10 10 -
LEGRYATALYSAASKLSQLD Q24439 32 32 -
LDGTYATALFTAASKTTSVE O74190 27 27 -
VEGRYAAALYSAGHKQNKLD P91283 30 30 -
VSKRYASALFDIANESAQLN ATPD_BACSU 6 6 -
VEGTYATALYQAAAKNSSID ATPO_YEAST 32 32 -
VAERYATALYELAEDRGALD ATPD_RHORU 11 11 -
LDGSYASSLYTAAVKESKLD O74479 39 39 -
IARPYAKAAFDFAIEQSAVE ATPD_HAEIN 7 7 -
IAGRYATAIFDLAQEAKGID ATPD_RHOCA 11 11 -
LAQPYAMAFLEFSLDAKQTL ATPD_GUITH 8 8 -
AADSYASALSEVAVENGTLE ATPD_SORBI 64 64 -
VGKVYSTALFELCTEQDKLE O50139 5 5 -
VANRYRYALFQLAEEKSILS ATPD_BACFI 6 6 -
VAKRYALALFQLATEKQMID ATPD_BACME 6 6 -
VGRRYAEAIYEIAESNDNVK ATPD_PROMO 6 6 -
IAAPYARALFDFSVDQNLMH ATPD_ODOSI 10 10 -
AAGSYAAALADLANSNNTLD ATPD_PEA 68 68 -
AAGSYANALADIAKSNGTLE ATPD_TOBAC 65 65 -
VGRRYGKALFELAIDSNSAE ATPD_ENTHR 8 8 -
TASRYASALADVADVTGTLE ATPD_SPIOL 74 74 -

Motif 2 width=12
Element Seqn Id St Int Rpt
RNFLLLLVDKRR ATPD_ANASP 78 48 -
LSFLMVLVDRKR ATPD_PORPU 79 49 -
LNFLMLLVNRGR ATPD_OCHNE 75 49 -
KNTLLLLLERHR ATPD_BACST 74 48 -
QNLLKVMAENGR ATPD_VIBAL 74 47 -
LNFLMLLVDKRR ATPD_SYNY3 79 49 -
INWLNLLVEKDR ATPD_CHLRE 108 50 -
LNFLMLLVDRRR ATPD_SYNP1 78 49 -
VKFLMVLVDRRR ATPD_ANTSP 78 49 -
LNFLNLLVDRNR ATPD_SYNP6 76 49 -
TNTLALMSEKRR ATPD_RHOBL 81 50 -
SNLINLLAENGR ATPO_BOVIN 106 49 -
TNLINLLAENGR ATPO_HUMAN 106 49 -
LNFLLILIERRR ATPD_CYACA 76 49 -
QNTLLLLLERHS ATPD_BACCA 74 48 -
QNFLLILAENGR ATPO_IPOBA 135 50 -
KNFLHLVLAKGR O05430 74 48 -
QNLIRVMAENGR ATPD_ECOLI 74 47 -
ANLMNLLAENGR ATPO_RAT 106 49 -
FKFLLLVIDRGR ATPD_CYAPA 79 49 -
VNLLGLLADNGR Q24439 102 50 -
QNLLKVLAENNR O74190 97 50 -
GNFLGLLAENGR P91283 100 50 -
LNTIFLLIDRHR ATPD_BACSU 74 48 -
VNLLKVLSENNR ATPO_YEAST 103 51 -
RNFLGVVAAKHR ATPD_RHORU 81 50 -
KNFYNVLLDNHR O74479 109 50 -
QNLIRLMAENKR ATPD_HAEIN 74 47 -
ANGLKLMATKRR ATPD_RHOCA 81 50 -
LKFLLVLCDRGR ATPD_GUITH 78 50 -
VNFINVVVDNFR ATPD_SORBI 133 49 -
LDFLCLTAEKNR O50139 76 51 -
LHTLLLLVENKR ATPD_BACFI 75 49 -
QHTVLLLLERHR ATPD_BACME 74 48 -
LNIIFYLIEKDR ATPD_PROMO 74 48 -
FKFLIVLVNRSR ATPD_ODOSI 79 49 -
HNFLNVLIDSKR ATPD_PEA 137 49 -
ANFLNILVDMKR ATPD_TOBAC 134 49 -
KNFLEVVYSYNR ATPD_ENTHR 76 48 -
ANFINILIDSER ATPD_SPIOL 143 49 -

Motif 3 width=15
Element Seqn Id St Int Rpt
RIFFLPEILQQYLAL ATPD_ANASP 89 -1 -
RISMLDVIAGKYLEL ATPD_PORPU 90 -1 -
RVAFLDKIAQKFLEL ATPD_OCHNE 86 -1 -
RFGLVPELADQFIAL ATPD_BACST 85 -1 -
RLAALPDVCTEFYTL ATPD_VIBAL 85 -1 -
RIVFLEAICEQYLAL ATPD_SYNY3 90 -1 -
RLSLVPEICECFEDL ATPD_CHLRE 119 -1 -
RINLLAAICQQYRAL ATPD_SYNP1 89 -1 -
RISMLHLIIDKYFSL ATPD_ANTSP 89 -1 -
RIAFLDGIADRYQAL ATPD_SYNP6 87 -1 -
RLFALPQVLSALAGL ATPD_RHOBL 92 -1 -
RLTNTPAVISAFSTM ATPO_BOVIN 117 -1 -
RLSNTQGVVSAFSTM ATPO_HUMAN 117 -1 -
RIIYFYDIVDQFILI ATPD_CYACA 87 -1 -
SFGLVPELAEQFLAL ATPD_BACCA 85 -1 -
RLKHIDRIVKRFKEL ATPO_IPOBA 146 -1 -
RERALPEMAAQFRRL O05430 85 -1 -
RLNALPDVLEQFIHL ATPD_ECOLI 85 -1 -
RLGNTQGVISAFSTI ATPO_RAT 117 -1 -
RISCLEIIAQKYQSL ATPD_CYAPA 90 -1 -
RLKKLDTVINAYKTI Q24439 113 -1 -
RLSLLEHVTSQFSKL O74190 108 -1 -
RLNKLESVVSSFESI P91283 111 -1 -
RAAIVPELTDEFIKL ATPD_BACSU 85 -1 -
RLGCFEKIASDFGVL ATPO_YEAST 114 -1 -
RSFAVPGMIGAFLER ATPD_RHORU 92 -1 -
RLYLLTRIQKQFSTL O74479 120 -1 -
RLSAIPAVFEEFKHH ATPD_HAEIN 85 -1 -
RLFALPQLLKGLAAA ATPD_RHOCA 92 -1 -
RSANLSSIIDNTIEL ATPD_GUITH 89 -1 -
RATILPEIVVEFENI ATPD_SORBI 144 -1 -
RADKLDEIYGEFRKM O50139 87 -1 -
RIESLVDMIDSFKEM ATPD_BACFI 86 -1 -
RIQIVSEMVKEYRFL ATPD_BACME 85 -1 -
RLSSIRGIVAEYLKI ATPD_PROMO 85 -1 -
RINLLEPIIASYLNL ATPD_ODOSI 90 -1 -
RIDMIIDIIKEFEFV ATPD_PEA 148 -1 -
RVELIKEIVKEFEKV ATPD_TOBAC 145 -1 -
RMSELSFMIDEYEHR ATPD_ENTHR 87 -1 -
RINLVKEILNEFEDV ATPD_SPIOL 154 -1 -

Motif 4 width=16
Element Seqn Id St Int Rpt
RQVELATKVDSDLIGG ATPD_ANASP 140 36 -
KEVKLVISVDPELIGG ATPD_PORPU 141 36 -
KKIKLALRVEPKLIGG ATPD_OCHNE 137 36 -
ATLHIENIVEPELIGG ATPD_BACST 136 36 -
RKVKLNCSVDETLLGG ATPD_VIBAL 135 35 -
QAVELETKVDGDILGG ATPD_SYNY3 141 36 -
KNIKLKPVIDSSLIAG ATPD_CHLRE 170 36 -
ADVELAIAIDPELLGG ATPD_SYNP1 140 36 -
KNVKLITTIDQTLIGG ATPD_ANTSP 140 36 -
AGVEIESQVDADLLGG ATPD_SYNP6 138 36 -
KTVKLNTTVDESLIGG ATPD_RHOBL 142 35 -
QVLKLEVKIDPSIMGG ATPO_BOVIN 169 37 -
QVLKLEAKTDPSILGG ATPO_HUMAN 169 37 -
NYIKLKLKIDPSLIGG ATPD_CYACA 138 36 -
QTLEIENIIDPELIGG ATPD_BACCA 136 36 -
KSVQIEQKIDPTILGG ATPO_IPOBA 198 37 -
RNIRLSSRVNPELIGG O05430 135 35 -
RKVKLNCKIDKSVMAG ATPD_ECOLI 135 35 -
QILNLEVKTDPSIMGG ATPO_RAT 169 37 -
NEVKLVFKIDQNLIGG ATPD_CYAPA 141 36 -
ESLKITSRVDPSIIGG Q24439 165 37 -
KSLKLENVVKPEIQGG O74190 162 39 -
QKLTVTYAVKPSILGG P91283 163 37 -
ASLRIRNEVQTDLIGG ATPD_BACSU 136 36 -
KSLKLENVVKPEIKGG ATPO_YEAST 168 39 -
NTVTIDASVDPALLGG ATPD_RHORU 142 35 -
GKLLVSNKVTPSIIGG O74479 172 37 -
RKVKLNCNVDNALIAG ATPD_HAEIN 135 35 -
KTVKLNVAVDESLIGG ATPD_RHOCA 142 35 -
EQIKLNITVDKTLIGG ATPD_GUITH 140 36 -
KNVRLKTQLDPELIAG ATPD_SORBI 195 36 -
KRIVLTEEIDKSIIGG O50139 137 35 -
AKLLVINVVNKDLLGG ATPD_BACFI 137 36 -
HTLNISNIVDKTVIGG ATPD_BACME 136 36 -
KKVNLEVSIDKSIIAG ATPD_PROMO 135 35 -
REIRLVITVDSSLIGG ATPD_ODOSI 141 36 -
KKVRTKTLLDPSLVAG ATPD_PEA 199 36 -
KNVRIKTVIDESLVAG ATPD_TOBAC 196 36 -
QTVELKQIVDSSIIGG ATPD_ENTHR 138 36 -
KNVRIKTVIDPSLVAG ATPD_SPIOL 205 36 -

Motif 5 width=19
Element Seqn Id St Int Rpt
GVIIKVGSQVIDSSIRGQL ATPD_ANASP 155 -1 -
GFTIQIGSKVIDTSIRGQL ATPD_PORPU 156 -1 -
GFTVEIGSKLIDTSIRGQL ATPD_OCHNE 152 -1 -
GVKLRIGNRIYDGSVSGQL ATPD_BACST 151 -1 -
GVIIRAGDLVIDDSARGRL ATPD_VIBAL 150 -1 -
GIVIKVGSQVFDSSLRGQL ATPD_SYNY3 156 -1 -
GFVVEYGSSQIDLSVRGQI ATPD_CHLRE 185 -1 -
GVVIKVGSQIFDASLRGQL ATPD_SYNP1 155 -1 -
GFIVRIGSKVIDASLSGKL ATPD_ANTSP 155 -1 -
GVIIKVGSQVLDASLRGQL ATPD_SYNP6 153 -1 -
GLIVKLGSTMIDTSVKSKL ATPD_RHOBL 157 -1 -
GMIVRIGEKYVDMSAKTKI ATPO_BOVIN 184 -1 -
GMIVRIGEKYVDMSVKTKI ATPO_HUMAN 184 -1 -
GLIIKFGSNLIDLSLKGKL ATPD_CYACA 153 -1 -
GVNVRIGNRIYDGSVSGQL ATPD_BACCA 151 -1 -
GLVVEFGQKVFDMSIRTRA ATPO_IPOBA 213 -1 -
GVVIRLGDRVLDASVKKKL O05430 150 -1 -
GVIIRAGDMVIDGSVRGRL ATPD_ECOLI 150 -1 -
GMIVRIGEKYVDMSAKSKI ATPO_RAT 184 -1 -
GFIINIGSKVVDASLLGQL ATPD_CYAPA 156 -1 -
GLIVSIGDKYVNMSIATKV Q24439 180 -1 -
GLIVEVSDRTVDLSIASRI O74190 177 -1 -
GLVVTIGDKYVDLSIASRV P91283 178 -1 -
GIKVRIGNRIYDGSVSGKL ATPD_BACSU 151 -1 -
GLIVELGDKTVDLSISTKI ATPO_YEAST 183 -1 -
GMVVRVGSRMVDSSLSTKL ATPD_RHORU 157 -1 -
GLIVEIGDNILDVSVGSRL O74479 187 -1 -
GVIVRTEDFVIDGSSRGQL ATPD_HAEIN 150 -1 -
GMIVKLGSRMIDTTVKAKL ATPD_RHOCA 157 -1 -
GFKVQIGSKVIDTSIQGQL ATPD_GUITH 155 -1 -
VQYGRDGSSLIDMSVRKQI ATPD_SORBI 213 2 -
GIIVRYGNTELDSSVKTRL O50139 152 -1 -
GLKIRIGDRIYDGRVKSQL ATPD_BACFI 152 -1 -
GVKLRIGNRIYDGSISSKL ATPD_BACME 151 -1 -
GGIIKIGDEIIDGSVRRQL ATPD_PROMO 150 -1 -
GFLIKTNSKVLDFTIKNQL ATPD_ODOSI 156 -1 -
VRYGNTGSKFIDMSVKRKL ATPD_PEA 217 2 -
IRYGNSGSKLIDMSVKKQL ATPD_TOBAC 214 2 -
GAIVEANHRVIDGSIRTQL ATPD_ENTHR 153 -1 -
IRYGNEGSKLVDMSVKKQL ATPD_SPIOL 223 2 -