SPRINT Home UMBER Home Contents Standard Search Advanced Search Relation Search

==SPRINT==> PRINTS View



  selected as


PR00090

Identifier
RNGDIOXGNASE  [View Relations]  [View Alignment]  
Accession
PR00090
No. of Motifs
6
Creation Date
25-FEB-1995  (UPDATE 29-JUL-1999)
Title
Ring hydroxylating dioxygenase alpha-subunit signature
Database References

PROSITE; PS00570 RING_HYDROXYL_ALPHA
PFAM; PF00848 Ring_hydroxyl_A
INTERPRO; IPR001663
UMBBD; e0062; e0217; e0089
Literature References
1. NEIDLE, E.L., HARTNETT, C., ORNSTON, L.N., BAIROCH, A., REKIK, M.
AND HARAYAMA, S.
Nucleotide sequences of the Acinetobacter calcoaceticus benABC genes
for benzoate 1,2-dioxygenase reveal evolutionary relationships among
multicomponent oxygenases.
J.BACTERIOL. 173 5385-5395 (1991).

Documentation
Ring hydroxylating dioxygenases are multicomponent 1,2-dioxygenase complexes
that convert closed-ring structures to non-aromatic cis-diols [1]. The
complex has both hydroxylase (containing alpha- and beta-subunits) and
electron transfer components [1]. Sequence analysis of hydroxylase subunits
of ring hydroxylating systems (including toluene, benzene and napthalene
1,2-dioxygenases) suggests they are derived from a common ancestor [1]. The
alpha-subunit binds both a Rieske-like 2Fe-2S cluster and an iron atom:
conserved Cys and His residues in the N-terminal region may provide 2Fe-2S
ligands, while conserved His and Tyr residues may coordinate the iron [1].
The beta subunit may be responsible for the substrate specifcity of the
dioxygenase system [1].
 
RNGDIOXGNASE is a 6-element fingerprint that provides a signature for the
dioxygenase system hydroxylase alpha-subunits. The fingerprint was derived
from an initial alignment of 5 sequences: the motifs were drawn from the
conserved N-terminal half of the alignment, motifs 3 and 4 spanning the
region encoded by PROSITE pattern RING_HYDROXYL_ALPHA (PS00570), which
contains the 2 Cys and 2 His residues implicated in 2Fe-2S cluster binding.
Two iterations on OWL25.1 were required to reach convergence, at which
point a true set comprising 16 sequences was identified.
 
An update on SPTR37_9f identified a true set of 48 sequences, and 9
partial matches.
Summary Information
  48 codes involving  6 elements
5 codes involving 5 elements
1 codes involving 4 elements
0 codes involving 3 elements
3 codes involving 2 elements
Composite Feature Index
6484848484848
5445534
4101110
3000000
2301200
123456
True Positives
BED1_PSEPU    BENA_ACICA    BNZA_PSEPU    BPA1_PSES1    
BPHA_BURCE BPHA_COMTE BPHA_PSEPS HCAA_ECOLI
NDOB_PSEAE NDOB_PSEFL NDOB_PSEPU O24676
O50578 O51848 O52379 O52382
O53311 O69363 O69795 O85673
O85843 O85964 O85966 O85986
O85989 O85993 O86136 O86899
O86909 O86913 O87618 P72256
P95531 P95564 P95566 Q44251
Q45695 Q46155 Q51592 Q51601
Q51743 Q52142 Q52383 Q52757
Q53086 Q53122 TOD1_PSEPU XYLX_PSEPU
True Positive Partials
Codes involving 5 elements
O85959 O86905 P95562 Q45693
Q51974
Codes involving 4 elements
YEAW_ECOLI
Codes involving 2 elements
O04121 O22553 O52833
Sequence Titles
BED1_PSEPU  BENZENE 1,2-DIOXYGENASE ALPHA SUBUNIT (EC 1.14.12.3) - PSEUDOMONAS PUTIDA. 
BENA_ACICA BENZOATE 1,2-DIOXYGENASE ALPHA SUBUNIT (EC 1.14.12.10) - ACINETOBACTER CALCOACETICUS.
BNZA_PSEPU BENZENE 1,2-DIOXYGENASE ALPHA SUBUNIT (EC 1.14.12.3) (P1 SUBUNIT) - PSEUDOMONAS PUTIDA.
BPA1_PSES1 BIPHENYL DIOXYGENASE ALPHA SUBUNIT (EC 1.14.99.-) - PSEUDOMONAS SP. (STRAIN KKS102).
BPHA_BURCE BIPHENYL DIOXYGENASE ALPHA SUBUNIT (EC 1.14.99.-) - BURKHOLDERIA CEPACIA (PSEUDOMONAS CEPACIA).
BPHA_COMTE BIPHENYL DIOXYGENASE ALPHA SUBUNIT (EC 1.14.99.-) - COMAMONAS TESTOSTERONI (PSEUDOMONAS TESTOSTERONI).
BPHA_PSEPS BIPHENYL DIOXYGENASE ALPHA SUBUNIT (EC 1.14.99.-) - PSEUDOMONAS PSEUDOALCALIGENES.
HCAA_ECOLI DIGOXIGENIN ALPHA SUBUNIT (EC 1.14.1.-) - ESCHERICHIA COLI.
NDOB_PSEAE NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT (EC 1.14.12.12) (NAPHTHALENE 1,2-DIOXYGENASE ISP ALPHA) - PSEUDOMONAS AERUGINOSA.
NDOB_PSEFL NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT (EC 1.14.12.12) (NAPHTHALENE 1,2-DIOXYGENASE ISP ALPHA) - PSEUDOMONAS FLUORESCENS.
NDOB_PSEPU NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT (EC 1.14.12.12) (NAPHTHALENE 1,2-DIOXYGENASE ISP ALPHA) - PSEUDOMONAS PUTIDA, AND PSEUDOMONAS SP. (STRAIN C18).
O24676 TECA1 - BURKHOLDERIA SP.
O50578 BIPHENYL DIOXYGENASE - PSEUDOMONAS SP.
O51848 ISOPROPYLBENZENE DIOXYGENASE, IRON-SULFUR PROTEIN, LARGE SUBUNIT - PSEUDOMONAS PUTIDA.
O52379 SALICYLATE-5-HYDROXYLASE LARGE OXYGENASE COMPONENT - PSEUDOMONAS SP.
O52382 NAPHTHALENE DIOXYGENASE LARGE OXYGENASE COMPONENT - PSEUDOMONAS SP.
O53311 HYPOTHETICAL 42.5 KD PROTEIN - MYCOBACTERIUM TUBERCULOSIS.
O69363 TERMINAL DIOXYGENASE, LARGE SUBUNIT - RHODOCOCCUS ERYTHROPOLIS.
O69795 TERMINAL OXYGENASE LARGE SUBUNIT - RALSTONIA SP.
O85673 ANTHRANILATE DIOXYGENASE LARGE SUBUNIT - ACINETOBACTER SP. ADP1.
O85843 LARGE SUBUNIT NAPH/BPH DIOXYGENASE - SPHINGOMONAS AROMATICIVORANS.
O85964 LARGE SUBUNIT AROMATIC OXYGENASE - SPHINGOMONAS AROMATICIVORANS.
O85966 LARGE SUBUNIT AROMATIC OXYGENASE - SPHINGOMONAS AROMATICIVORANS.
O85986 LARGE SUBUNIT AROMATIC OXYGENASE - SPHINGOMONAS AROMATICIVORANS.
O85989 LARGE SUBUNIT TOLUATE/BENZOATE DIOXYGENASE - SPHINGOMONAS AROMATICIVORANS.
O85993 LARGE SUBUNIT AROMATIC OXYGENASE - SPHINGOMONAS AROMATICIVORANS.
O86136 BIPHENYL DIOXYGENASE ALPHA SUBUNIT - BURKHOLDERIA SP.
O86899 DXNA1 PROTEIN - SPHINGOMONAS SP.
O86909 HYPOTHETICAL 50.8 KD PROTEIN - SPHINGOMONAS SP.
O86913 PUTATIVE RING-HYDROXYLATING DIOXYGENASE, LARGE SUBUNIT - SPHINGOMONAS SP.
O87618 O-HALOBENZOATE DIOXYGENASE ALPHA SUBUNIT - PSEUDOMONAS AERUGINOSA.
P72256 ISOPROPYLBENZENE 2,3-DIOXYGENASE - RHODOCOCCUS ERYTHROPOLIS.
P95531 LARGE SUBUNIT OF TERMINAL DIOXYGENASE - PSEUDOMONAS PUTIDA.
P95564 ISPALPHA 2NT - PSEUDOMONAS SP.
P95566 ISOPROPYLBENZENE-2,3-DIOXYGENASE - PSEUDOMONAS SP.
Q44251 ANILINE DIOXYGENASE ALPHA-SUBUNIT - ACINETOBACTER SP.
Q45695 ISP-ALPHA - BURKHOLDERIA SP.
Q46155 IRON SULFUR PROTEIN LARGE SUBUNIT - CYCLOCLASTICUS OLIGOTROPHUS.
Q51592 2,4,5-TRICHLOROPHENOXYACETIC ACID OXYGENASE 1 - BURKHOLDERIA CEPACIA (PSEUDOMONAS CEPACIA).
Q51601 2-HALOBENZOATE 1,2-DIOXYGENASE - BURKHOLDERIA CEPACIA (PSEUDOMONAS CEPACIA).
Q51743 IRON-SULFUR PROTEIN LARGE SUBUNIT OF CUMENE DIOXYGENASE - PSEUDOMONAS FLUORESCENS.
Q52142 IRON-SULFUR PROTEIN LARGE SUBUNIT - PSEUDOMONAS PUTIDA.
Q52383 CHLOROBENZENE DIOXYGENASE, LARGE SUBUNIT OF TERMINAL OXYGENASE - PSEUDOMONAS SP.
Q52757 LARGE SUBUNIT OF THE BIPHENYL DIOXYGENASE - RHODOCOCCUS GLOBERULUS, AND RHODOCOCCUS ERYTHROPOLIS.
Q53086 TERMINAL DIOXYGENASE, LARGE SUBUNIT - RHODOCOCCUS SP.
Q53122 BIPHENYL DIOXYGENASE - RHODOCOCCUS SP.
TOD1_PSEPU TOLUENE 2,3-DIOXYGENASE ALPHA SUBUNIT (EC 1.14.12.-) - PSEUDOMONAS PUTIDA.
XYLX_PSEPU TOLUATE 1,2-DIOXYGENASE ALPHA SUBUNIT (EC 1.14.12.-) - PSEUDOMONAS PUTIDA.

O85959 LARGE SUBUNIT AROMATIC OXYGENASE - SPHINGOMONAS AROMATICIVORANS.
O86905 HYPOTHETICAL 45.3 KD PROTEIN - SPHINGOMONAS SP.
P95562 REDUCTASE 2NT (NTDAA), ORF2, FERREDOXIN 2NT (NTDAB), ISPALPHA 2NT (NTDAC), AND ISPBETA (NTDAD) GENES, COMPLETE CDS (NTDAB) (NTDAD) - PSEUDOMONAS SP.
Q45693 FERREDOXIN OXIDOREDUCTASE (DNTAA), ORF2 PROTEIN, FERREDOXIN (DNTAB), ISP-ALPHA (DNTAC), ISP-BETA (DNTAD) GENES, COMPLETE CDS (DNTAB) (DNTAD) - BURKHOLDERIA SP.
Q51974 P-CUMATE DIOXYGENASE LARGE SUBUNIT - PSEUDOMONAS PUTIDA.

YEAW_ECOLI PUTATIVE DIOXYGENASE ALPHA SUBUNIT YEAW (EC 1.14.1.-) - ESCHERICHIA COLI.

O04121 CHOLINE MONOOXYGENASE PRECURSOR - SPINACIA OLERACEA (SPINACH).
O22553 CHOLINE MONOOXYGENASE - BETA VULGARIS (SUGAR BEET).
O52833 ALCE - BORDETELLA BRONCHISEPTICA.
Scan History
OWL25_1    2  100  NSINGLE    
SPTR37_9f 4 60 NSINGLE
Initial Motifs
Motif 1  width=26
Element Seqn Id St Int Rpt
DEDLYQLELERVFARSWLLLGHETQI TOD1_PSEPU 38 38 -
DEDLYQLELERVFARSWLLLGHETQI BNZA_PSEPU 38 38 -
DEELFQHELKTIFARNWLFLTHDSLI NDOB_PSEPU 23 23 -
DPRLFDLEMKHIFEGNWIYLAHESQI XYLX_PSEPU 34 34 -
DQALFDLEMKYIFEGNWVYLAHESQI BENA_ACICA 37 37 -

Motif 2 width=16
Element Seqn Id St Int Rpt
DYITTYMGEDPVVVVR TOD1_PSEPU 68 4 -
DYITTYMGEDPVVVVR BNZA_PSEPU 68 4 -
DYVTAKMGIDEVIVSR NDOB_PSEPU 53 4 -
DYYTTQMGRQPIFITR XYLX_PSEPU 64 4 -
DYYTTYIGRQPILIAR BENA_ACICA 67 4 -

Motif 3 width=21
Element Seqn Id St Int Rpt
IAVFLNQCRHRGMRICRADAG TOD1_PSEPU 89 5 -
IAVFLNQCRHRGMRICRADAG BNZA_PSEPU 89 5 -
IRAFLNVCRHRGKTLVSVEAG NDOB_PSEPU 74 5 -
LNAFVNACSHRGATLCRFRSG XYLX_PSEPU 85 5 -
LNAMINACSHRGAQLLGHKRG BENA_ACICA 88 5 -

Motif 4 width=21
Element Seqn Id St Int Rpt
NAKAFTCSYHGWAYDTAGNLV TOD1_PSEPU 110 0 -
NAKAFTCSYHGWAYDTAGNLV BNZA_PSEPU 110 0 -
NAKGFVCSYHGWGFGSNGELQ NDOB_PSEPU 95 0 -
NKATHTCSFHGWTFSNSGKLL XYLX_PSEPU 106 0 -
NKTTYTCPFHGWTFNNSGKLL BENA_ACICA 109 0 -

Motif 5 width=27
Element Seqn Id St Int Rpt
ARVETYKGLIFANWDENAVDLDTYLGE TOD1_PSEPU 152 21 -
ARVETYKGLIFANWDENAVDLDTYLGE BNZA_PSEPU 152 21 -
ARVESFHGFIYGCFDQEAPPLMDYLGD NDOB_PSEPU 139 23 -
ARFASYRGFLFGSLREDVAPLEEFLGE XYLX_PSEPU 152 25 -
ARFESYKGFLFGSLNPVDPSLQEFLGE BENA_ACICA 155 25 -

Motif 6 width=23
Element Seqn Id St Int Rpt
GTEAIPGVQKWVIPCNWKFAAEQ TOD1_PSEPU 193 14 -
GTEAIPGVQKWVIPCNWKFAAEQ BNZA_PSEPU 193 14 -
GLELVGPPGKVVIKANWKAPAEN NDOB_PSEPU 179 13 -
GLEVLRGSSTYVYEGNWKVQVEN XYLX_PSEPU 193 14 -
GLEVLRGVSTYTYEGNWKLTAEN BENA_ACICA 196 14 -
Final Motifs
Motif 1  width=26
Element Seqn Id St Int Rpt
DEDLYQLELERVFARSWLLLGHETQI TOD1_PSEPU 38 38 -
DEDLYQLELERVFARSWLLLGHETQI BNZA_PSEPU 38 38 -
DEDLYQLELERVFARSWLLLGHETHI BED1_PSEPU 38 38 -
DEDLYQLELERVFARSWLLLGHETQV O69795 37 37 -
DEDLYQIELERVFGRSWLLLGHETQI Q52383 38 38 -
DEDLYQIELERVFGRSWLLLGHETQI O24676 38 38 -
DQDLYEIELERIFARSWLLLGHEAHI BPA1_PSES1 43 43 -
DQDLYQLELERVFGRSWLMLGHETHI BPHA_COMTE 42 42 -
DQDLYQLELERVFGRSWLMLGHETHI O86136 42 42 -
DEALYEQELERIFGRSWLLMGHETQI P72256 40 40 -
DEALYEQELERIFGRSWLLMGHETQI Q53122 40 40 -
DEALYQQELELIFGRSWLLLGHETQI Q53086 41 41 -
DEALYQQELELIFGRSWLLLGHETQI Q52757 41 41 -
DQSLYELELERVFGRSWLLLGHESHV BPHA_BURCE 42 42 -
DQSLYELELERVFGRSWLLLGHESHV BPHA_PSEPS 42 42 -
DQSLYELELERVFGRSWLLLGHESHV O50578 42 42 -
DQDLYEIELERVFARSWLLLGHEGHI O51848 43 43 -
DQDLYEIELERVFARSWLLLGHEGHI P95566 43 43 -
DQDLYEIELERVFARSWLLLGHEGHI Q51743 43 43 -
DEALYELELERVFARSWILLGHESHV Q46155 34 34 -
DPDIYQLELERIFGRCWLFLAHESQI HCAA_ECOLI 27 27 -
DEDIYRLELDRVFGRNWLFLAHDSMI O86909 48 48 -
DQAIYERELEQVFGRSWLFLAHDSQL O69363 22 22 -
DEELFQHELKTIFARNWLFLTHDSLI NDOB_PSEPU 23 23 -
DEELFQRELETIFARNWLFLTHDSLI NDOB_PSEAE 23 23 -
DQAVYDLEMERIFARSWLFLGHESQI O86899 27 27 -
DEELFQHELRTIXARNWLFLTHDSLI NDOB_PSEFL 23 23 -
GEGLFQHELRAVFARNWLFLTHDSLI Q52142 23 23 -
DKELFQHELKTIFARNWLFLTHDSLI O52382 21 21 -
DADIYEEELYRIFARSWLFVAHESQI O85966 30 30 -
DKELFQHELKTIFARNWLFLTHDSLI P95564 21 21 -
DKELFQHELKTIFARNWLFLTHDSLI Q45695 26 26 -
SEDIYRQELERIFGRCWLFLVHTSQI O85964 23 23 -
DQDVYQLELERIFSRCWLMLGHDSLV O85843 22 22 -
DEEIYRQELERLFRKCWLLIGHESQI O86913 52 52 -
DEAIFSREMNNIFAATWVYLAHESEI P95531 36 36 -
DPRLFDLEMKHIFEGNWIYLAHESQI XYLX_PSEPU 34 34 -
DPRIFELEMSRIFESTWVFIGLESQV Q51592 40 40 -
EAALFELEMKYIFERNWVYLAHESQV O85989 43 43 -
DQALFDLEMKYIFEGNWVYLAHESQI BENA_ACICA 37 37 -
EASIFQAEMDKIFQANWVFLLHASQI Q44251 20 20 -
REDLYKRELERLFYANHWCYVGLEAE O52379 32 32 -
DKDIYKQELERLFYNNHWCYVGLEAE O87618 29 29 -
DAALFDYEMKYIFEQNWVFLAHESQV Q51601 40 40 -
EPELFELEMELIFEKVWIYACHESEI O85673 35 35 -
DRQYYDREQENIFKGNCWSFVGLEAE O85993 28 28 -
SQAIFTAEQENIFRGQTWCYLGLEAE O85986 24 24 -
SSELWQLERERIFNRSWMLVAHVDQV O53311 37 37 -

Motif 2 width=16
Element Seqn Id St Int Rpt
DYITTYMGEDPVVVVR TOD1_PSEPU 68 4 -
DYITTYMGEDPVVVVR BNZA_PSEPU 68 4 -
DYFTTYMGEDPVVVVR BED1_PSEPU 68 4 -
DYFTTYMGEDPVLVVR O69795 67 4 -
DYTTNYMGEDPVLVVR Q52383 68 4 -
DYTTNYMGEDPVLVVR O24676 68 4 -
DYLTTYMGEDPVIMVR BPA1_PSES1 73 4 -
DYLTTYMGEDPVIMVR BPHA_COMTE 72 4 -
DYLTTYMGEDPVIMVR O86136 72 4 -
DFMTNYMGEDPVMVVR P72256 70 4 -
DFMTNYMGEDPVMVVR Q53122 70 4 -
DFMTQYMGEDPVIVSR Q53086 71 4 -
DFMTQYMGEDPVIVSR Q52757 71 4 -
DFLATYMGEDPVVMVR BPHA_BURCE 72 4 -
DFLATYMGEDPVVMVR BPHA_PSEPS 72 4 -
DFLATYMGEDPVVMVR O50578 72 4 -
DYLTTYMGEDPVIVVR O51848 73 4 -
DYLTTYMGEDPVIVVR P95566 73 4 -
DYLTTYMGEDPVIVVR Q51743 73 4 -
DFLNTYIGEDPVILVR Q46155 64 4 -
DFFNTYMGEDAVVVVR HCAA_ECOLI 57 4 -
DFFSTYMGGDPVVVAR O86909 78 4 -
SFVQTYMGEDPVLVVR O69363 52 4 -
DYVTAKMGIDEVIVSR NDOB_PSEPU 53 4 -
DYVTAKMGVDEVIVSR NDOB_PSEAE 53 4 -
DYITTTMGEDSVILSR O86899 57 4 -
DYVTAKMGIDEVIVSR NDOB_PSEFL 53 4 -
DYVTAKMGIDEVIVSR Q52142 53 4 -
DYVTAKMGVDEVIVSR O52382 51 4 -
DFLTTHMGEDAVIVAR O85966 60 4 -
DYVTAKMGVDEVIVSR P95564 51 4 -
DYVKAKMGVDEVIVSR Q45695 56 4 -
DYFRTFMGEDDVIVIR O85964 53 4 -
DFITTYMAEDRVILSR O85843 52 4 -
DFFLTRMGEDQVILSR O86913 82 4 -
DFKQAWIGVREVIVAR P95531 66 4 -
DYYTTQMGRQPIFITR XYLX_PSEPU 64 4 -
DFITADIGRQPVILTR Q51592 70 4 -
DFITTKIGRVPILVTR O85989 73 4 -
DYYTTYIGRQPILIAR BENA_ACICA 67 4 -
DYQTVRMGGRPLIVVR Q44251 50 4 -
DFKRTVIGERSVIMVR O52379 63 5 -
DFKRTLIGERSVIMTR O87618 60 5 -
DYLVSNIGRQPVIITR Q51601 70 4 -
DFVTVQIGRQPMIVSR O85673 65 4 -
DFKSTFVGETPVILTR O85993 59 5 -
DFRSTHVGNTPVVVTR O85986 55 5 -
DYVTVSVAGEPVMVVR O53311 67 4 -

Motif 3 width=21
Element Seqn Id St Int Rpt
IAVFLNQCRHRGMRICRADAG TOD1_PSEPU 89 5 -
IAVFLNQCRHRGMRICRADAG BNZA_PSEPU 89 5 -
IAVFLNQCRHRGMRICRSDAG BED1_PSEPU 89 5 -
IAVFLNQCRHRGMRICRSDAG O69795 88 5 -
IAVFLNQCRHRGMRICRSDAG Q52383 89 5 -
IAVFLNQCRHRGMRICRSDAG O24676 89 5 -
IKVFLNQCRHRGMRICRSDAG BPA1_PSES1 94 5 -
IKVFLNQCRHRGMRIVRSDGG BPHA_COMTE 93 5 -
IKVFLNQCRHRGMRIVRSDGG O86136 93 5 -
IRVFLNQCRHRGMRICRADGG P72256 91 5 -
IRVFLNQCRHRGMRICRADGG Q53122 91 5 -
ISVFLNQCRHRGMRICRADGG Q53086 92 5 -
ISVFLNQCRHRGMRICRADGG Q52757 92 5 -
IKVFLNQCRHRGMRICRSDAG BPHA_BURCE 93 5 -
IKVFLNQCRHRGMRICRSDAG BPHA_PSEPS 93 5 -
IKVFLNQCRHRGMRICRSDAG O50578 93 5 -
IKVFLNQCRHRGMRLERSDFG O51848 94 5 -
IKVFLNQCRHRGMRIERSNFG P95566 94 5 -
IKVFLNQCRHRGMRIERSDFG Q51743 94 5 -
LRVFLNQCHHRGMKLSRDDAG Q46155 85 5 -
IKAFLNQCRHRAMRVSYADCG HCAA_ECOLI 78 5 -
VRAFLNACRHRGMRVCRAESG O86909 99 5 -
VKAFLNQCRHRGMRICRSDEG O69363 73 5 -
IRAFLNVCRHRGKTLVSVEAG NDOB_PSEPU 74 5 -
IRAFLNVCRHRGKTLVHAEAG NDOB_PSEAE 74 5 -
FAAFLNQCRHRGNRLCLADRG O86899 78 5 -
IRAFLNVCRHRGKTLVNAEAG NDOB_PSEFL 74 5 -
IRAFLNVCRHRGKTLVNAEAG Q52142 74 5 -
VRAFLNVCRHRGKTLVHAEAG O52382 72 5 -
IRVMLNSCPHRGNKVCFADAG O85966 81 5 -
VRAFLNVCRHRGKTLVHTEAG P95564 72 5 -
VRAFLNVCRHRGKTIVDAEAG Q45695 77 5 -
IKAFLNSCTHRGNRICRADRG O85964 74 5 -
LKAFINSCTHRGNQICHADSG O85843 73 5 -
PHAFLNTCRHKGMRVCRYDEG O86913 103 5 -
IRVFSNRCSHRGASVCREHRG P95531 87 5 -
LNAFVNACSHRGATLCRFRSG XYLX_PSEPU 85 5 -
LACFLNSCRHRGALLCPFSKG Q51592 91 5 -
VGAFVNACSHRGARLCRERAG O85989 94 5 -
LNAMINACSHRGAQLLGHKRG BENA_ACICA 88 5 -
FQALLNRCPHRGAKVCRNDSG Q44251 71 5 -
INVVENVCAHRGMRFCRERHG O52379 84 5 -
INVIENVCAHRGMQFCRKRNG O87618 81 5 -
VSAVINACSHRGAELCRRKQG Q51601 91 5 -
LHAMVNACEHRGATLTRVAKG O85673 86 5 -
LHVVVNRCAHRGALVCREMRG O85993 80 5 -
IHAWVNRCAHKGATVCRSLRG O85986 76 5 -
LHALSPICRHRLMLMVEPGAG O53311 88 5 -

Motif 4 width=21
Element Seqn Id St Int Rpt
NAKAFTCSYHGWAYDTAGNLV TOD1_PSEPU 110 0 -
NAKAFTCSYHGWAYDTAGNLV BNZA_PSEPU 110 0 -
NAKAFTCSYHGWAYDTAGNLI BED1_PSEPU 110 0 -
NAKAFTCSYHGWAYDTAGNLV O69795 109 0 -
NAKAFTCSYHGWAYDTAGNLV Q52383 110 0 -
NAKAFTCSYHGWAYDTAGNLV O24676 110 0 -
NAKAFTCTYHGWAYDIAGNLV BPA1_PSES1 115 0 -
NAKAFTCTYHGWAYDIAGNLV BPHA_COMTE 114 0 -
NAKAFTCTYHGWAYDIAGNLV O86136 114 0 -
NAKSFTCSYHGWAYDTGGNLV P72256 112 0 -
NAKSFTCSYHGWAYDTGGNLV Q53122 112 0 -
NAKSFTCSYHGWAYDSAGNLV Q53086 113 0 -
NAKSFTCSYHGWAYDSAGNLV Q52757 113 0 -
NAKAFTCSYHGWAYDIAGKLV BPHA_BURCE 114 0 -
NAKAFTCSYHGWAYDIAGKLV BPHA_PSEPS 114 0 -
NAKAFTCSYHGWAYDIAGKLV O50578 114 0 -
NAKSFTCTYHGWAYDTAGNLV O51848 115 0 -
NAKSFTCTYHGWAYDTAGNLV P95566 115 0 -
NAKSFTCTYHGWAYDTAGNLV Q51743 115 0 -
NAKAFVCTYHGWAHDISGQLI Q46155 106 0 -
NTRAFTCPYHGWSYGINGELI HCAA_ECOLI 99 0 -
NTKSFFCTYHGWAYDTAGNLI O86909 120 0 -
TNKTFTCSYHGWAYDLEGNLI O69363 94 0 -
NAKGFVCSYHGWGFGSNGELQ NDOB_PSEPU 95 0 -
NAKGFVCSYHGWGFGANGELQ NDOB_PSEAE 95 0 -
NAKSFRCSYHGWVFNNAGGLV O86899 99 0 -
NAKGFVCSYHGWGFGSNGELQ NDOB_PSEFL 95 0 -
NAKGFVCSYHGWGFGSNGELQ Q52142 95 0 -
NAKGFVCSYHGWGFGSNGELQ O52382 93 0 -
NTRRFVCNYHGWAFDTAGDLK O85966 102 0 -
NAKGFVCGYHGWGYGSNGELQ P95564 93 0 -
NAKGFVCGYHGWGYGSNGELQ Q45695 98 0 -
NARAFTCNYHGWSFSPDGALS O85964 95 0 -
SAKAFVCNYHGWVFGQDGSLV O85843 94 0 -
NTKRFYCPYHGWSYDLNGDLQ O86913 124 0 -
NAAGFTCPYHGWRFDNRGQLF P95531 108 0 -
NKATHTCSFHGWTFSNSGKLL XYLX_PSEPU 106 0 -
NQKFHVCRYHGWSYDSSGRNI Q51592 112 0 -
NKRNHMCPFHGWTFSSGGDLL O85989 115 0 -
NKTTYTCPFHGWTFNNSGKLL BENA_ACICA 109 0 -
NSKTFTCPYHGWKFRNSGKAF Q44251 92 0 -
NAKDFFCPYHQWNYSLKGDLQ O52379 105 0 -
NAKELVCPYHQWNYSLKGDLQ O87618 102 0 -
NRSTFTCQFHGWTFSNTGKLL Q51601 112 0 -
NQSVFTCPFHAWCYKSDGRLV O85673 107 0 -
NRASLECVYHQWAYDLKGNLI O85993 101 0 -
ADGAFVCVYHQWAYDATGALV O85986 99 2 -
RIDTLTCQYHLWRYGLDGRLR O53311 109 0 -

Motif 5 width=27
Element Seqn Id St Int Rpt
ARVETYKGLIFANWDENAVDLDTYLGE TOD1_PSEPU 152 21 -
ARVETYKGLIFANWDENAVDLDTYLGE BNZA_PSEPU 152 21 -
ARVETYKGLIFANWDENAIDLDTYLGE BED1_PSEPU 152 21 -
ARVATYKGLIFANWDENAVDLDTYLGE O69795 151 21 -
ARVATYKGLIFANWDHDAPDLDTYLGE Q52383 152 21 -
ARVATYKGLIFANWDHDAPDLDTYLGE O24676 152 21 -
ARVETYKGLIFANWDAEAPDLKTYLSD BPA1_PSES1 164 28 -
ARVETYKGLVFANWDPEAPDLKTYLSD BPHA_COMTE 163 28 -
ARVETYKGLVFANWDPEAPDLKTYLSD O86136 163 28 -
ARVETYKGLIFANWDADAPDLDTYLGE P72256 154 21 -
ARVETYKGLIFANWDADAPDLDTYLGE Q53122 154 21 -
ARVETYKGLIFANWDSEAPDLDTYLGE Q53086 155 21 -
ARVETYKGLIFANWDSEAPDLDTYLGE Q52757 155 21 -
ARVATYKGLVFANWDVQAPDLETYLGD BPHA_BURCE 163 28 -
ARVATYKGLVFANWDVQAPDLETYLGD BPHA_PSEPS 163 28 -
ARVATYKGLVFANWDVQAPDLETYLGD O50578 163 28 -
ARVDTYKGLIFANWDAEAPDLLTYLSD O51848 164 28 -
ARVDTYKGLIFANWDTEAPDLKTYLSD P95566 164 28 -
ARVDTYKGLIFANWDTEAPDLKTYLSD Q51743 164 28 -
ARVETYRGLIFANWDEQAPSLDKYLSD Q46155 149 22 -
PCVESYKGLIFGNWDTSAPGLRDYLGD HCAA_ECOLI 143 23 -
ARIESYKGLIFGNFDATAPSLEEHLGD O86909 164 23 -
VRVEEYKGFYFGTWSEDVPEFTDYLGD O69363 137 22 -
ARVESFHGFIYGCFDQEAPPLMDYLGD NDOB_PSEPU 139 23 -
ARVESFHGFIYGCFDEEAPSLKDYMGD NDOB_PSEAE 139 23 -
PRVETYKGLIFGNWRADAPDLLSSLGE O86899 140 20 -
ARVESFHGFIYGCFDQEAPSLMDYLGD NDOB_PSEFL 139 23 -
ARVESFHGFIYACIDQEAPSLMDYLGD Q52142 139 23 -
PRIESFHGFIYGCFDAEAPTLVDYLGD O52382 137 23 -
AKVGNYKGLVFATFNSDAPSLEAWLGD O85966 146 23 -
PRIESFHGFIYGCFDAEAPPLIDYLGD P95564 137 23 -
PRIESFHGFIYGCFDAEAPPLIDYLGD Q45695 142 23 -
TKVAEYKGLVFGCWDANSPSLDDYLGD O85964 139 23 -
IRVETYKGFIFGCHDPEAPSLEDYLGD O85843 137 22 -
ARIASFRGTIWATWNPEAPDFEDYLGD O86913 168 23 -
AQVASYKGFVFATLNPDAPSLAEHLGN P95531 151 22 -
ARFASYRGFLFGSLREDVAPLEEFLGE XYLX_PSEPU 152 25 -
ARLESYRGFVFASLSPDVPTLQEHLGG Q51592 157 24 -
ARVESYRGFIFASLSADVVPLVDHLAG O85989 160 24 -
ARFESYKGFLFGSLNPVDPSLQEFLGE BENA_ACICA 155 25 -
PRVESYRGFVFATSNENAVSLEEHLGS Q44251 135 22 -
LKVAARGGAVFASFDHDVEPFEEFLGP O52379 157 31 -
LKVATRGGVVFASFDHDVESFEDYLGP O87618 154 31 -
PSFANYRGFLFGSMNPDACPIEEHLGG Q51601 158 25 -
GRIASYRGFVFVSLDTQATDSLEDFLG O85673 149 21 -
LRTESVGGLVFASFSETVESCRDFLGP O85993 149 27 -
LRVETFGGLVFGTFNSTIAPLDDFLGP O85986 147 27 -
FAVATWNGLVWINLDADAEPIAAHLDL O53311 150 20 -

Motif 6 width=23
Element Seqn Id St Int Rpt
GTEAIPGVQKWVIPCNWKFAAEQ TOD1_PSEPU 193 14 -
GTEAIPGVQKWVIPCNWKFAAEQ BNZA_PSEPU 193 14 -
GTEVIPGIQKWVIPCNWKFAAEQ BED1_PSEPU 193 14 -
GTEAIPGVQKWVIPCNWKFAAEQ O69795 192 14 -
GTEAIPGVQKWVIPCNWKFAAEQ Q52383 193 14 -
GTEAIPGVQKWVIPCNWKLAAEQ O24676 193 14 -
GTTVVGGMQKWVIPCNWKFAAEQ BPA1_PSES1 205 14 -
GTEAIGGIQKWVIPCNWKFAAEQ BPHA_COMTE 204 14 -
GTEAIGGIQKWVIPCNWKFAAEQ O86136 204 14 -
GTEAIPGIQKWVIPCNWKFAAEQ P72256 195 14 -
GTEAIPGIQKWVIPCNWKFAAEQ Q53122 195 14 -
GTEALPGIEKWVIQCNWKFAAEQ Q53086 196 14 -
GTEALPGIEKWVIQCNWKFAAEQ Q52757 196 14 -
GTVAIGGMQKWVIPCNWKFAAEQ BPHA_BURCE 204 14 -
GTVAIGGMQKWVIPCNWKFAAEQ BPHA_PSEPS 204 14 -
GTVAIGGMQKWVIPCNWKFAAEQ O50578 204 14 -
GTQVITGMQKTVIPCNWKFAAEQ O51848 205 14 -
GTAVITGMQKTVIPCNWKFAAEQ P95566 205 14 -
VTQVITGMQKTVIPCNWKFAAEQ Q51743 205 14 -
GTEAIGGIQKWVIPTNWKFAAEQ Q46155 190 14 -
GTEIVGGVQKWVINCNWKFPAEQ HCAA_ECOLI 184 14 -
GIEVLPGVVRWTINANWKLAAEQ O86909 205 14 -
GLELVPMTSKWVIDCNWKFASEQ O69363 178 14 -
GLELVGPPGKVVIKANWKAPAEN NDOB_PSEPU 179 13 -
GLELIGPPGKVIIKANWKAPAEN NDOB_PSEAE 179 13 -
GGVELIGPQRNISSANWKWQAEQ O86899 180 13 -
GLELVGPPGKVVIKANWKAPAEN NDOB_PSEFL 179 13 -
GLELVGPPGKVVIKANWKAPAEN Q52142 179 13 -
GLELVGPPGKVVIKANWKAPAEN O52382 177 13 -
GTEFIGGCIKSVISANWKFGVEN O85966 187 14 -
GLELVGPPGKVVVKANWKPFAEN P95564 177 13 -
GLELVGPPAKVVVKGNWKVFAEN Q45695 182 13 -
GSALLGETQKMVLGTNWKLPVEN O85964 180 14 -
GLELLGPPLKSTLACNWKVPTEN O85843 178 14 -
EIEVLGGVQKWNVPCNWKFVSEN O86913 212 17 -
ENLRLAGAQRFRLACNWKLVWDN P95531 193 15 -
GLEVLRGSSTYVYEGNWKVQVEN XYLX_PSEPU 193 14 -
GLEYVSGTVDYTFDANWKLQFEN Q51592 198 14 -
AMEVLPGTNRYRYHGNWKMQVEN O85989 202 15 -
GLEVLRGVSTYTYEGNWKLTAEN BENA_ACICA 196 14 -
EIKVSKSVQRYEIKCNWKLVFDN Q44251 176 14 -
RKLKILGYRRQRIPGNWKLMQEN O52379 196 12 -
RKLHILGYNRQRIPGNWKLMQEN O87618 193 12 -
ELEVLRGSSSYIYDGNWKLQIEN Q51601 199 14 -
ELEVLQGKSAYTFAGNWKLQNEN O85673 192 16 -
KPITVLGDQRQRIRGNWKLYAEN O85993 187 11 -
RPVKVLGYARQFMAGNWKLYSEN O85986 185 11 -
GEMVQVESWSHEWRANWKVAAEN O53311 187 10 -