PRINTS BLAST

BLAST Search

This is an interface to a BLAST search of all protein sequences contained within the PRINTS database. The user entered sequence may be a protein or DNA sequence. Detailed information about BLAST including, descriptions of the BLAST search parameters, a BLAST manual and references for BLAST and its statitics, can be found on the NCBI BLAST web pages.

A PRINTS BLAST application note from Bioinformatics 1999 Jun 15(6) 523-4 is available. Information about search input requirements and result output can be found here. Primary sequence databases may be searched here.

BLAST version 2.2.4

Search parameters
 Output parameters
Expect: or   
Cutoff Score: or   
Matrix:
For DNA sequences only
Strand:

Descriptions:
Alignments:
Sort by:
Description line order:
PRINTS     or   sequence  

Type of sequence: protein     or   DNA  
Sequence submission: protein code or accession     or   actual sequence  
Retrieve previous results: search ID  


                

This search may take upto a few minutes, depending on the type and length of sequence submitted.
Mail any comments/suggestions/problems to will@bioinf.man.ac.uk