WORKLIST ENTRIES (1):
OTCASE View alignment View Structure Ornithine carbamoyltransferase signature
Type of fingerprint: COMPOUND with 5 elements
Links:
PRINTS; PR00101 ATCASE; PR00100 AOTCASE; PR00098 CPSASE; PR00099 CPSGATASE
PRINTS; PR00096 GATASE; PR00097 ANTSNTHASEII
INTERPRO; IPR002292
Creation date 11-MAR-1992; UPDATE 30-JUN-1999
1. MARTIN, P.R., COOPERIDER, J.W. AND MULKS, M.H.
Sequence of the argf gene encoding ornithine transcarbamoylase from
Neisseria gonorrhoeae.
GENE 94 139-140 (1990).
2. BAUR, H., STALON, V., FALMAGNE, P., LUETHI, E. AND HAAS, D.
Primary and quaternary structure of the catabolic ornithine
carbamoyltransferase from Pseudomonas aeruginosa.
EUR.J.BIOCHEM. 166 111-117 (1987).
3. HUYGEN, R., CRABEEL, M. AND GLANSDORFF, N.
Nucleotide sequence of the ARG3 gene of the yeast Saccharomyces cerevisiae
encoding ornithine carbamoyltransferase.
EUR.J.BIOCHEM. 166 371-377 (1987).
4. UPSHALL, A., GILBERT, T., SAARI, G., O'HARA, P.J., WEGLENSKI, P., BERSE,
B., MILLER, K. AND TIMBERLAKE, W.E.
Molecular analysis of the argB gene of Aspergillus nidulans.
MOL.GEN.GENET. 204 349-354 (1986).
5. MOSQUEDA, G., VAN DEN BROECK, G., SAUCEDO, O., BAILEY, A.M.,
ALVAREZ-MORALES, A. AND HERRERA-ESTRELLA, L.
Isolation and characterization of the gene from Pseudomonas syringae pv.
phaseolicola encoding the phaseolotoxin insensitive ornithine
carbamoyltransferase.
MOL.GEN.GENET. 222 461-466 (1990).
The ornithine carbamoyltransferases are a family of enzymes that catalyse
the production of citrulline from carbamoyl-phosphate and ornithine [1].
This reaction is part of the arginine biosynthetic pathway, and in some
organisms the reaction is also part of the arginine deaminase pathway [2].
In most prokaryotes, and some lower eukaryotes, the enzyme is found in the
cytoplasm, but in higher eukaryotes, such as mammals, the enzyme is found
in the mitochondrial matrix and functions as part of the urea cycle. In
most organisms analysed to date, the enzyme has been shown to consist of a
trimer of identical or nonidentical subunits [3]. Extensive similarity has
been found within the ornithine carbamoyltransferase family, some of the
conserved areas being important in catalysis [4].
The C-terminal region of these enzymes shows a degree of similarity to the
aspartate carbamoyltransferases, which are also known to bind carbamoyl-
phosphate [5]. This region contains a highly conserved Cys residue (in a
His-Cys-Lys-Pro motif) implicated in ornithine binding [3].
OTCASE is a 5-element fingerprint that provides a signature for ornithine
carbamoyltransferases. The fingerprint was derived from an initial
alignment of 5 sequences: motifs 1 (cf. PROSITE pattern CARBAMOYLTRANSFERASE
(PS00097)) and 3 contain residues thought to be involved in carbamoyl-
phosphate binding. Two iterations on OWL15.0 were required to reach
convergence, at which point a true set comprising 18 sequences was
identified. Several partial matches were also found.
An update on SPTR37_9f identified a true set of 43 sequences, and 7
partial matches.
SUMMARY INFORMATION
43 codes involving 5 elements
1 codes involving 4 elements
0 codes involving 3 elements
6 codes involving 2 elements
COMPOSITE FINGERPRINT INDEX
5| 43 43 43 43 43
4| 0 1 1 1 1
3| 0 0 0 0 0
2| 6 4 1 0 1
--+--------------------------
| 1 2 3 4 5
True positives..
OTC1_ECOLI OTC2_ECOLI OTC_ARCFU OTC_METTH
O86132 O58457 OTC_PYRFU O51897
OTCA_THEMA OTCC_CLOPE O51782 OTCC_NEIGO
OTCC_RHIET OTCC_HAEIN OTCC_PSEAE OTCA_MYCBO
OTCA_MYCTU OTCA_PSESH OTC_METJA OTC_ASPTE
OTC_EMENI OTCA_PSEAE OTCA_BACSU OTC_RANCA
O53089 OTC_HUMAN OTC_ASPNG OTC_MOUSE
OTC_RAT OTC_SCHPO O87319 OTC_PEA
OTC_ARATH OTCA_SYNY3 OTCA_LACPL OTC_YEAST
O67607 OTC_HALSA OTC_PACTA OTCC_PSESH
OTC_CORHI OTCA_VIBS2 O76458
Subfamily: Codes involving 4 elements
Subfamily True positives..
OTCC_MYCPN
Subfamily: Codes involving 2 elements
Subfamily True positives..
PYRB_MYCTU PYRB_METJA O15804 PYRB_SYNY3
PYRB_ARCFU PYRB_SERMA
PROTEIN TITLES
OTC1_ECOLI ORNITHINE CARBAMOYLTRANSFERASE CHAIN I (EC 2.1.3.3) (OTCASE-
OTC2_ECOLI ORNITHINE CARBAMOYLTRANSFERASE CHAIN F (EC 2.1.3.3) (OTCASE-
OTC_ARCFU ORNITHINE CARBAMOYLTRANSFERASE (EC 2.1.3.3) (OTCASE) - ARCHA
OTC_METTH ORNITHINE CARBAMOYLTRANSFERASE (EC 2.1.3.3) (OTCASE) - METHA
O86132 ORNITHINE CARBAMOYLTRANSFERASE (EC 2.1.3.3) - BACILLUS LICHE
O58457 317AA LONG HYPOTHETICAL ORNITHINE CARBAMOYLTRANSFERASE - PYR
OTC_PYRFU ORNITHINE CARBAMOYLTRANSFERASE (EC 2.1.3.3) (OTCASE) - PYROC
O51897 ARCB - BORRELIA AFZELII.
OTCA_THEMA ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (EC 2.1.3.3) (OTCAS
OTCC_CLOPE ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (EC 2.1.3.3) (OTCA
O51782 ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (ARCB) - BORRELIA
OTCC_NEIGO ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (EC 2.1.3.3) (OTCA
OTCC_RHIET ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (EC 2.1.3.3) (OTCA
OTCC_HAEIN ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (EC 2.1.3.3) (OTCA
OTCC_PSEAE ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (EC 2.1.3.3) (OTCA
OTCA_MYCBO ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (EC 2.1.3.3) (OTCAS
OTCA_MYCTU ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (EC 2.1.3.3) (OTCAS
OTCA_PSESH ORNITHINE CARBAMOYLTRANSFERASE, PHASEOLOTOXIN-SENSITIVE, ANA
OTC_METJA ORNITHINE CARBAMOYLTRANSFERASE (EC 2.1.3.3) (OTCASE) - METHA
OTC_ASPTE ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
OTC_EMENI ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
OTCA_PSEAE ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (EC 2.1.3.3) (OTCAS
OTCA_BACSU ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (EC 2.1.3.3) (OTCAS
OTC_RANCA ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
O53089 ORNITHINE TRANSCARBAMOYLASE (EC 2.1.3.3) (ORNITHINE CARBAMOY
OTC_HUMAN ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
OTC_ASPNG ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
OTC_MOUSE ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
OTC_RAT ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
OTC_SCHPO ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
O87319 ORNITHINE CARBAMOYLTRANSFERASE - NOSTOC PCC73102.
OTC_PEA ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
OTC_ARATH ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
OTCA_SYNY3 ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (EC 2.1.3.3) (OTCAS
OTCA_LACPL ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (EC 2.1.3.3) (OTCAS
OTC_YEAST ORNITHINE CARBAMOYLTRANSFERASE (EC 2.1.3.3) (OTCASE) (ORNITH
O67607 ORNITHINE CARBAMOYLTRANSFERASE - AQUIFEX AEOLICUS.
OTC_HALSA ORNITHINE CARBAMOYLTRANSFERASE (EC 2.1.3.3) (OTCASE) - HALOB
OTC_PACTA ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
OTCC_PSESH ORNITHINE CARBAMOYLTRANSFERASE, PHASEOLOTOXIN-INSENSITIVE, C
OTC_CORHI ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
OTCA_VIBS2 ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (EC 2.1.3.3) (OTCAS
O76458 ORNITHINE CARBAMOYLTRANSFERASE - GIARDIA INTESTINALIS.
OTCC_MYCPN ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (EC 2.1.3.3) (OTCA
PYRB_MYCTU ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
PYRB_METJA ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
O15804 ASPARTATE TRANSCARBAMOYLASE (EC 2.1.3.2) - PLASMODIUM FALCIP
PYRB_SYNY3 ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
PYRB_ARCFU ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
PYRB_SERMA ASPARTATE CARBAMOYLTRANSFERASE CATALYTIC CHAIN (EC 2.1.3.2)
SCAN HISTORY
OWL15_0 2 100 NSINGLE
OWL17_1 1 100 NSINGLE
OWL19_1 1 100 NSINGLE
OWL26_0 1 250 NSINGLE
SPTR37_9f 3 100 NSINGLE
INITIAL MOTIF SETS
OTCASE1 Length of motif = 15 Motif number = 1
OTCase motif I - 1 (putative carbamoyl-phosphate binding region)
PCODE ST INT
LIFEKDSTRTRCSFE OTC2_ECOLI 49 49
MIFEKSSTRTRVSFE OTC2_BACSU 51 51
MIFEKRSTRTRLSTE OTC_HUMAN 84 84
LIFEKTSTRTRCAFE OTCC_PSEAE 50 50
LIFNKRSTRTRVSSE OTC_PACTA 78 78
OTCASE2 Length of motif = 14 Motif number = 2
OTCase motif II - 1
PCODE ST INT
QIGHKESIKDTARV OTC2_ECOLI 82 18
QLGRGETVADTAKV OTC2_BACSU 84 18
HLGVNESLTDTARV OTC_HUMAN 117 18
QIGHKESMKDTARV OTCC_PSEAE 83 18
QLGVNESLHDTTKI OTC_PACTA 111 18
OTCASE3 Length of motif = 15 Motif number = 3
OTCase motif III - 1 (putative carbamoyl-phosphate binding region)
PCODE ST INT
VPVWNGLTNEFHPTQ OTC2_ECOLI 122 26
IPVINGLTDKYHPCQ OTC2_BACSU 124 26
IPIINGLSDLYHPIQ OTC_HUMAN 157 26
VPVFNGLTDEYHPTQ OTCC_PSEAE 123 26
VPIINALCDTFHPLQ OTC_PACTA 151 26
OTCASE4 Length of motif = 11 Motif number = 4
OTCase motif IV - 1
PCODE ST INT
IYTDVWVSMGE OTC2_ECOLI 228 91
IYSDVFTSMGQ OTC2_BACSU 227 88
LITDTWISMGR OTC_HUMAN 260 88
VHTDVWVSMGE OTCC_PSEAE 228 90
IVTDTWISMGQ OTC_PACTA 255 89
OTCASE5 Length of motif = 12 Motif number = 5
OTCase motif V - 1
PCODE ST INT
SIVFDQAENRMH OTC2_ECOLI 310 71
SAVFQQAENRLH OTC2_BACSU 289 51
SLVFPEAENRKW OTC_HUMAN 321 50
NIAFEQAENRMH OTCC_PSEAE 311 72
SLVFEEGENRLY OTC_PACTA 319 53
FINAL MOTIF SETS
OTCASE1 Length of motif = 15 Motif number = 1
OTCase motif I - 3
PCODE ST INT
LIFEKDSTRTRCSFE OTC1_ECOLI 49 49
LIFEKDSTRTRCSFE OTC2_ECOLI 49 49
MIFELPSTRTRVSFE OTC_ARCFU 45 45
MIFEKSSTRTRVSFE OTC_METTH 40 40
LLFEKPSTRTRCAFT O86132 53 53
MIFQKPSTRTRVSFE O58457 51 51
MIFQKPSTRTRVSFE OTC_PYRFU 51 51
IIFEKDSTRTRCAFE O51897 50 50
MIFEKRSTRTRLAFE OTCA_THEMA 51 51
LLFEKTSTRTRCAFE OTCC_CLOPE 51 51
IIFEKDSTRTRCAFE O51782 51 51
LIFEKTSTRTRCAFE OTCC_NEIGO 49 49
LIFEKTSTRTRCAFE OTCC_RHIET 51 51
LIFEKTSTRTRCAFE OTCC_HAEIN 51 51
LIFEKTSTRTRCAFE OTCC_PSEAE 50 50
VIFDKNSTRTRFSFE OTCA_MYCBO 44 44
VIFDKNSTRTRFSFE OTCA_MYCTU 44 44
MIFEKSSTRTRLSFE OTCA_PSESH 47 47
ILFEKPSTRTRMSFD OTC_METJA 42 42
MMFSKRSTRTRISTE OTC_ASPTE 83 83
MIFSKRSTRTRVSTE OTC_EMENI 81 81
MVFEKASTRTRLSFE OTCA_PSEAE 46 46
MIFEKSSTRTRVSFE OTCA_BACSU 51 51
MIFEKRSTRTRLSTE OTC_RANCA 80 80
LLFEKNSTRTRAAFT O53089 52 52
MIFEKRSTRTRLSTE OTC_HUMAN 84 84
MMFSKRSTRTRISTE OTC_ASPNG 91 91
MIFEKRSTRTRLSTE OTC_MOUSE 84 84
MIFEKRSTRTRLSTE OTC_RAT 84 84
MIFSKRSTRTRVSVE OTC_SCHPO 57 57
LLFSKASTRTRVSFT O87319 45 45
MIFAKPSMRTRVSFE OTC_PEA 117 117
MIFAKPSMRTRVSFE OTC_ARATH 117 117
LLFYKASTRTRVSFT OTCA_SYNY3 47 47
LLFEKTSTRTRSAFT OTCA_LACPL 51 51
LIFTKRSTRTRISTE OTC_YEAST 61 61
LLFTKPSTRTRVSFE O67607 44 44
MLFAKPSTRTRLSFE OTC_HALSA 43 43
LIFNKRSTRTRVSSE OTC_PACTA 78 78
GIFLKPSGRTSTSFV OTCC_PSESH 52 52
LLFSKRSTRTRLSAE OTC_CORHI 72 72
TIYEKPSLRTRVTFD OTCA_VIBS2 43 43
AFFAKPSLRTRVSLE O76458 48 48
OTCASE2 Length of motif = 14 Motif number = 2
OTCase motif II - 3
PCODE ST INT
QIGHKESIKDTARV OTC1_ECOLI 82 18
QIGHKESIKDTARV OTC2_ECOLI 82 18
QLGRGEPIKDTARV OTC_ARCFU 78 18
QLGRGEPIADTART OTC_METTH 73 18
QLGKKESIEDTAKV O86132 86 18
QLRRGETIADTARV O58457 84 18
QLRRGETIADTARV OTC_PYRFU 84 18
QIGVKESMKDTARV O51897 83 18
HLGAKESLEDTARV OTCA_THEMA 84 18
QMGKKESIEDTAKV OTCC_CLOPE 82 16
QMGSKESMIDTARV O51782 84 18
QIGHKESIKDTARV OTCC_NEIGO 82 18
QIGHKESFKDTARV OTCC_RHIET 84 18
QIGHKESMKDTARV OTCC_HAEIN 84 18
QIGHKESMKDTARV OTCC_PSEAE 83 18
QLGRDETLQDTAKV OTCA_MYCBO 77 18
QLGRDETLQDTAKV OTCA_MYCTU 77 18
QLGRGEPIADSAKV OTCA_PSESH 80 18
HLGKKESIKDTAKV OTC_METJA 75 18
QLGVNESLYDTAVV OTC_ASPTE 116 18
QLGVNESLYDTSVV OTC_EMENI 114 18
QLGRGEPIGDSARV OTCA_PSEAE 79 18
QLGRGETVADTAKV OTCA_BACSU 84 18
HLGVNESLKDTARV OTC_RANCA 113 18
QLGKKESVEDTAKV O53089 85 18
HLGVNESLTDTARV OTC_HUMAN 117 18
QLGVNESLYDTAVV OTC_ASPNG 124 18
HLGVNESLTDTARV OTC_MOUSE 117 18
HLGVNESLTDTARV OTC_RAT 117 18
QLGVNESLYDTSKV OTC_SCHPO 90 18
QVSRGEPLQDTARV O87319 78 18
QMGKREETRDVARV OTC_PEA 150 18
QMGKREETPDVARV OTC_ARATH 150 18
QVGRGEPIQDTARV OTCA_SYNY3 80 18
QFGTKESVVDTAKV OTCA_LACPL 84 18
QLGVNESFYDTTKV OTC_YEAST 94 18
QVSRGEDVRDTART O67607 77 18
QLSRGEPISDVSQV OTC_HALSA 76 18
QLGVNESLHDTTKI OTC_PACTA 111 18
RFGHKESIKDFARV OTCC_PSESH 85 18
QLGVNETVPDSARV OTC_CORHI 105 18
AIGERETVKDFAAN OTCA_VIBS2 76 18
NVGGKETVQDTAEV O76458 82 19
OTCASE3 Length of motif = 15 Motif number = 3
OTCase motif III - 3
PCODE ST INT
VPVWNGLTNEFHPTQ OTC1_ECOLI 122 26
VPVWNGLTNEFHPTQ OTC2_ECOLI 122 26
VPVINGLSNLEHPCQ OTC_ARCFU 118 26
VPVINGLTDLEHPCQ OTC_METTH 113 26
VPVWNGLTDLWHPTQ O86132 126 26
VPVINGLSDFSHPCQ O58457 124 26
VPVINGLSDFSHPCQ OTC_PYRFU 124 26
VPVYNGLTDISHPTQ O51897 123 26
VPVYNGLTDEFHPTQ OTCA_THEMA 124 26
VPVWNGLTDADHPTQ OTCC_CLOPE 122 26
VPVYNGLTDISHPTQ O51782 124 26
VPVFNGLTNEFHPTQ OTCC_NEIGO 122 26
VPVYNGLTDEYHPTQ OTCC_RHIET 124 26
VPVFNGLTDEFHPTQ OTCC_HAEIN 124 26
VPVFNGLTDEYHPTQ OTCC_PSEAE 123 26
VPVINALSDEFHPCQ OTCA_MYCBO 117 26
VPVINALSDEFHPCQ OTCA_MYCTU 117 26
VPVINGLSDDLHPCQ OTCA_PSESH 120 26
VPVINALSDLAHPCQ OTC_METJA 115 26
VPVINALCDSFHPLQ OTC_ASPTE 156 26
VPVINALCDSFHPLQ OTC_EMENI 154 26
VPVINGLSDDLHPCQ OTCA_PSEAE 119 26
IPVINGLTDKYHPCQ OTCA_BACSU 124 26
IPIVNGLSDDYHPIQ OTC_RANCA 153 26
VPVWNGLTDEWHPTQ O53089 124 25
IPIINGLSDLYHPIQ OTC_HUMAN 157 26
KPVINALCDSYHPLQ OTC_ASPNG 164 26
IPIVNGLSDLYHPIQ OTC_MOUSE 157 26
IPIVNGLSDLYHPIQ OTC_RAT 157 26
CPVINGLCDTFHPLQ OTC_SCHPO 130 26
IPVINALTDAEHPCQ O87319 118 26
VPVINGLTDYNHPVQ OTC_PEA 190 26
VPVVNGLTDHNHPCQ OTC_ARATH 190 26
MPIINALSDLEHPCQ OTCA_SYNY3 120 26
VPVWNGLTDEWHPTQ OTCA_LACPL 124 26
VPIINSLCDKFHPLQ OTC_YEAST 134 26
VPVINALTNMSHPCQ O67607 117 26
VPVVNGLTDFLHPCQ OTC_HALSA 116 26
VPIINALCDTFHPLQ OTC_PACTA 151 26
IPVWNALTDTHHPTQ OTCC_PSESH 125 26
VPVLNALSSLWHPTQ OTC_CORHI 145 26
VPVVNSLCDLYHPCQ OTCA_VIBS2 116 26
VPCINALDDFGHPLQ O76458 122 26
OTCASE4 Length of motif = 11 Motif number = 4
OTCase motif IV - 3
PCODE ST INT
IYTDVWVSMGE OTC1_ECOLI 228 91
IYTDVWVSMGE OTC2_ECOLI 228 91
IYTDVWTSMGQ OTC_ARCFU 217 84
VYTDVWVSMGY OTC_METTH 215 87
LYTDVWVSMGE O86132 230 89
IYTDVWASMGQ O58457 227 88
IYTDVWASMGQ OTC_PYRFU 226 87
VYTDVWVSMGE O51897 227 89
VYTDVWASMGE OTCA_THEMA 228 89
IYTDIWVSMGE OTCC_CLOPE 227 90
VYTDVWVSMGE O51782 228 89
IHTDVWVSMGE OTCC_NEIGO 227 90
IHTDVWVSMGE OTCC_RHIET 229 90
IHTDVWVSMGE OTCC_HAEIN 229 90
VHTDVWVSMGE OTCC_PSEAE 228 90
LVTDTWTSMGQ OTCA_MYCBO 221 89
LVTDTWTSMGQ OTCA_MYCTU 221 89
VSTDVWTSMGQ OTCA_PSESH 216 81
LYTDVWISMGD OTC_METJA 219 89
LVTDTWVSMGQ OTC_ASPTE 270 99
LVTDTWVSMGQ OTC_EMENI 268 99
VSTDVWASMGQ OTCA_PSEAE 215 81
IYSDVFTSMGQ OTCA_BACSU 227 88
LVTDTWVSMGQ OTC_RANCA 256 88
LYTDVWVSMGE O53089 228 89
LITDTWISMGQ OTC_HUMAN 260 88
LVTDTWVSMGQ OTC_ASPNG 279 100
LITDTWISMGQ OTC_MOUSE 260 88
LITDTWISMGQ OTC_RAT 260 88
VVTDTWISMGQ OTC_SCHPO 233 88
LYTDVWASMGQ O87319 220 87
VYSDVWASMGQ OTC_PEA 290 85
VYSDVWASMGQ OTC_ARATH 290 85
LYTDVWASMGQ OTCA_SYNY3 222 87
LYTDVWVSMGE OTCA_LACPL 228 89
LVTDTFVSMGE OTC_YEAST 246 97
VYTDVWVSMGE O67607 221 89
VYGDVFVSMGE OTC_HALSA 210 79
IVTDTWISMGQ OTC_PACTA 255 89
IYTDVWISMGE OTCC_PSESH 229 89
VVTDTWISMGQ OTC_CORHI 273 113
IYGDTWVSMGD OTCA_VIBS2 218 87
VYTDSWMSYHI O76458 237 100
OTCASE5 Length of motif = 12 Motif number = 5
OTCase motif V - 3
PCODE ST INT
SIVFDQAENRMH OTC1_ECOLI 310 71
SIVFDQAENRMH OTC2_ECOLI 310 71
SIVFDQAENRLH OTC_ARCFU 279 51
SVVWDQAENRLH OTC_METTH 277 51
SKVFDEAENRMH O86132 310 69
SVVWDEAENRLH O58457 289 51
SVVWDQAENRLH OTC_PYRFU 288 51
SVVFDVAENRVH O51897 306 68
SRVWDEAENRKH OTCA_THEMA 291 52
SVVFDEAENRMH OTCC_CLOPE 308 70
SVVFDVAENRVH O51782 306 67
GIVFDQAENRMH OTCC_NEIGO 308 70
NVAFEQAENRLH OTCC_RHIET 311 71
NIAFEQAENRMH OTCC_HAEIN 312 72
NIAFEQAENRMH OTCC_PSEAE 311 72
SAVWDEAENRLH OTCA_MYCBO 283 51
SAVWDEAENRLH OTCA_MYCTU 283 51
SVAWDQAENRLH OTCA_PSESH 278 51
SVVYDEAENRLH OTC_METJA 281 51
SLVFPEAENRLW OTC_ASPTE 333 52
SLVFPEAENRLW OTC_EMENI 331 52
SVAWDQAENRLH OTCA_PSEAE 277 51
SAVFQQAENRLH OTCA_BACSU 289 51
SLVFQEAENRKW OTC_RANCA 317 50
ARQFEEAENRMH O53089 308 69
SLVFPEAENRKW OTC_HUMAN 321 50
SLVFPEAENRLW OTC_ASPNG 342 52
SLVFPEAENRKW OTC_MOUSE 321 50
SLVFPEAENRKW OTC_RAT 321 50
SLVFQEAENRKW OTC_SCHPO 294 50
SRVWEQAENRLH O87319 282 51
SIVFPQAENRMH OTC_PEA 352 51
SIVFPQAENRMH OTC_ARATH 352 51
SRLWDQAENRMH OTCA_SYNY3 284 51
AVVFEEAGNRMP OTCA_LACPL 308 69
SIVFEEAENRLY OTC_YEAST 307 50
DFIFTQAENRLH O67607 280 48
SVIFDQAENRMH OTC_HALSA 272 51
SLVFEEGENRLY OTC_PACTA 319 53
SRVFDQGENRMH OTCC_PSESH 304 64
SLVFQESDNRKW OTC_CORHI 336 52
SLIFDQAENRMH OTCA_VIBS2 279 50
SVCYDEAGNRLH O76458 300 52
User query: Display/Full Code "OTCASE"