WORKLIST ENTRIES (1):

LIVERXRECPTR View alignment     Liver X receptor signature
 Type of fingerprint: COMPOUND with 5  elements
Links:
   PRINTS; PR00047 STROIDFINGER; PR00398 STRDHORMONER
   PRINTS; PR00521 ANDROGENR; PR01282 COUPTNFACTOR; PR01283 ECDYSTEROIDR
   PRINTS; PR00528 GLCORTICOIDR; PR01284 NUCLEARECPTR; PR00350 VITAMINDR
   PRINTS; PR00544 PROGESTRONER; PR01288 PROXISOMEPAR; PR00545 RETINOIDXR
   PRINTS; PR01293 RORNUCRECPTR; PR00546 THYROIDHORMR; PR00543 OESTROGENR
   PDB; 1P8D 3Dinfo; 1PQ6 3Dinfo; 1PQ9 3Dinfo; 1UPV 3Dinfo; 1UPW 3Dinfo
   SCOP; 1P8D; 1PQ6; 1PQ9; 1UPV; 1UPW 
   CATH; 1P8D; 1PQ6; 1PQ9; 1UPV; 1UPW
   MIM; 602423; 600380

 Creation date 23-JUL-2010

   1. NUCLEAR RECEPTORS NOMENCLATURE COMMITTEE
   A unified nomenclature system for the nuclear receptor superfamily.
   CELL 97 161-163 (1999).
  
   2. NISHIKAWA, J-I., KITAURA, M., IMAGAWA, M. AND NISHIHARA, T.
   Vitamin D receptor contains multiple dimerisation interfaces that
   are functionally different.
   NUCLEIC ACIDS RES. 23(4) 606-611 (1995).
  
   3. DE VOS, P., SCHMITT, J., VERHOEVEN, G. AND STUNNENBERG, G.
   Human androgen receptor expressed in HeLa cells activates transcription
   in vitro.
   NUCLEIC ACIDS RES. 22(7) 1161-1166 (1994).
  
   4. ZHAO, C. AND DAHLMAN-WRIGHT, K.
   Liver X receptor in cholesterol metabolism.
   J.ENDOCRINOL. 204 233-240 (2010).

   5. KORF, H., VANDER BEKEN, S., ROMANO, M., STEFFENSEN, K., STIJLEMANS, B., 
   GUSTAFSSON, J., GROOTEN, J. AND HUYGEN K.
   Liver X receptors contribute to the protective immune response against 
   Mycobacterium tuberculosis in mice.
   J.CLIN.INVEST. 119 1626-1637 (2009).

   Steroid or nuclear hormone receptors (NRs) constitute an important super-
   family of transcription regulators that are involved in widely diverse 
   physiological functions, including control of embryonic development, cell
   differentiation and homeostasis [1]. Members of the superfamily include the
   steroid hormone receptors and receptors for thyroid hormone, retinoids, 
   1,25-dihydroxy-vitamin D3 and a variety of other ligands. The proteins 
   function as dimeric molecules in nuclei to regulate the transcription of 
   target genes in a ligand-responsive manner [2,3]. In addition to C-terminal
   ligand-binding domains, these nuclear receptors contain a highly-conserved,
   N-terminal zinc-finger that mediates specific binding to target DNA 
   sequences, termed ligand-responsive elements. In the absence of ligand,
   steroid hormone receptors are thought to be weakly associated with nuclear
   components; hormone binding greatly increases receptor affinity.
  
   NRs are extremely important in medical research, a large number of them
   being implicated in diseases such as cancer, diabetes, hormone resistance
   syndromes, etc. [1]. While several NRs act as ligand-inducible transcription
   factors, many do not yet have a defined ligand and are accordingly termed 
   "orphan" receptors. During the last decade, more than 300 NRs have been
   described, many of which are orphans, which cannot easily be named due to 
   current nomenclature confusions in the literature. However, a new system 
   has recently been introduced in an attempt to rationalise the increasingly 
   complex set of names used to describe superfamily members [1].
  
   Liver X receptors (LXRs) are nuclear receptors that regulate the metabolism
   of several important lipids, including oxysterols [4]. There are two LXR 
   isoforms, termed alpha and beta, which, upon activation, form heterodimers 
   with retinoid X receptors and bind to an LXR response element found in the 
   promoter region of their target genes. In addition to their involvement in 
   lipid metabolism, LXRs also act as key regulators of macrophage function, 
   and have roles in inflammation and immunity [5].
  
   LIVERXRECPTR is a 5-element fingerprint that provides a signature for the
   liver X receptors. The fingerprint was derived from an initial alignment
   of 24 sequences: the motifs were drawn from conserved regions spanning
   virtually the full alignment length - motif 1 lies in the N-terminal region;
   motif 2 resides in the zinc-binding region shared by the steroid hormone
   receptor family; motifs 3 and 4 lie in the C-terminal ligand-binding region;
   and motif 5 resides at the C-terminus. Two iterations on SPTR57.15_40.15f 
   were required to reach convergence, at which point a true set comprising 40
   sequences was identified. Ten partial matches were also found, all of which
   are translated nucleotide sequences that fail to match one or more motifs.

  SUMMARY INFORMATION
     40 codes involving  5 elements
      2 codes involving  4 elements
      3 codes involving  3 elements
      5 codes involving  2 elements

   COMPOSITE FINGERPRINT INDEX
  
    5|  40   40   40   40   40  
    4|   1    2    2    2    1  
    3|   0    1    2    3    3  
    2|   5    5    0    0    0  
   --+--------------------------
     |   1    2    3    4    5  

True positives..
 A2AGR4_MOUSE   Q91X41_MOUSE   Q4TU03_PIG     NR1H3_MOUSE    
 NR1H3_BOVIN    A5A4X4_PIG     A4UVT2_PIG     B2R8B9_HUMAN   
 Q8IW13_HUMAN   Q5U0N9_HUMAN   NR1H3_HUMAN    B5MBY7_HUMAN   
 B4DXU5_HUMAN   B6ZGS8_HUMAN   NR1H3_RAT      Q5I035_RAT     
 B3KV37_HUMAN   Q8AXU8_CHICK   Q8JHU1_CHICK   C5IUM7_ANAPL   
 D1MDC5_CAIMO   Q4SHF7_TETNG   B6ZGS7_HUMAN   Q6IBU6_HUMAN   
 Q68CY8_HUMAN   NR1H2_HUMAN    B8Y3M0_SALSA   B8Y3M1_ONCMY   
 NR1H2_BOVIN    Q5BIN1_BOVIN   Q58D83_BOVIN   C4PE87_CYPCA   
 C5IU94_CTEID   Q56A56_DANRE   NR1H2_MOUSE    Q8BP65_MOUSE   
 NR1H2_RAT      Q0IHW4_XENTR   Q6GMA2_XENLA   Q58CP4_BOVIN   
Subfamily:  Codes involving 4 elements
 Subfamily True positives..
 Q5REL4_PONAB   A1L1Z8_DANRE   
Subfamily:  Codes involving 3 elements
 Subfamily True positives..
 B3KRG6_HUMAN   B4DNM6_HUMAN   D1LX57_SACKO   
Subfamily:  Codes involving 2 elements
 Subfamily True positives..
 C9J2C8_HUMAN   C9JJ16_HUMAN   C9JCS0_HUMAN   C9JBS2_HUMAN   
 C9J4R0_HUMAN   


  PROTEIN TITLES
   A2AGR4_MOUSE     Nuclear receptor subfamily 1 group H member 3 - Mus musculus
   Q91X41_MOUSE     Nr1h3 protein - Mus musculus 
   Q4TU03_PIG       Liver X receptor alpha - Sus scrofa 
   NR1H3_MOUSE      Oxysterols receptor LXR-alpha - Mus musculus 
   NR1H3_BOVIN      Oxysterols receptor LXR-alpha - Bos taurus 
   A5A4X4_PIG       Liver X receptor alpha - Sus scrofa 
   A4UVT2_PIG       Liver X receptor alpha - Sus scrofa 
   B2R8B9_HUMAN     cDNA, FLJ93824, highly similar to Homo sapiens nuclear recep
   Q8IW13_HUMAN     NR1H3 protein - Homo sapiens 
   Q5U0N9_HUMAN     Nuclear receptor subfamily 1, group H, member 3 - Homo sapie
   NR1H3_HUMAN      Oxysterols receptor LXR-alpha - Homo sapiens 
   B5MBY7_HUMAN     Putative uncharacterized protein NR1H3 - Homo sapiens 
   B4DXU5_HUMAN     cDNA FLJ56172, highly similar to Oxysterols receptor LXR-alp
   B6ZGS8_HUMAN     Liver X receptor alpha - Homo sapiens 
   NR1H3_RAT        Oxysterols receptor LXR-alpha - Rattus norvegicus 
   Q5I035_RAT       Nuclear receptor subfamily 1, group H, member 3 - Rattus nor
   B3KV37_HUMAN     cDNA FLJ16096 fis, clone SPLEN2006232, highly similar to OXY
   Q8AXU8_CHICK     Liver X receptor alpha - Gallus gallus 
   Q8JHU1_CHICK     Liver X receptor - Gallus gallus 
   C5IUM7_ANAPL     Liver X receptor alpha - Anas platyrhynchos 
   D1MDC5_CAIMO     Liver X receptor alpha protein - Cairina moschata 
   Q4SHF7_TETNG     Chromosome 5 SCAF14581, whole genome shotgun sequence - Tetr
   B6ZGS7_HUMAN     Liver X receptor beta - Homo sapiens 
   Q6IBU6_HUMAN     NR1H2 protein - Homo sapiens 
   Q68CY8_HUMAN     Putative uncharacterized protein DKFZp686D1580 - Homo sapien
   NR1H2_HUMAN      Oxysterols receptor LXR-beta - Homo sapiens 
   B8Y3M0_SALSA     Liver X receptor - Salmo salar 
   B8Y3M1_ONCMY     Liver X receptor - Oncorhynchus mykiss 
   NR1H2_BOVIN      Oxysterols receptor LXR-beta - Bos taurus 
   Q5BIN1_BOVIN     Nuclear receptor subfamily 1, group H, member 2 - Bos taurus
   Q58D83_BOVIN     Nuclear receptor subfamily 1, group H, member 2 - Bos taurus
   C4PE87_CYPCA     Liver X receptor - Cyprinus carpio 
   C5IU94_CTEID     Liver X receptor - Ctenopharyngodon idella 
   Q56A56_DANRE     Nuclear receptor subfamily 1, group H, member 3 - Danio reri
   NR1H2_MOUSE      Oxysterols receptor LXR-beta - Mus musculus 
   Q8BP65_MOUSE     Putative uncharacterized protein - Mus musculus 
   NR1H2_RAT        Oxysterols receptor LXR-beta - Rattus norvegicus 
   Q0IHW4_XENTR     Nuclear receptor subfamily 1, group H, member 2 - Xenopus tr
   Q6GMA2_XENLA     MGC81974 protein - Xenopus laevis 
   Q58CP4_BOVIN     Nuclear receptor subfamily 1, group H, member 2 - Bos taurus
 
   Q5REL4_PONAB     Putative uncharacterized protein DKFZp468A0622 - Pongo abeli
   A1L1Z8_DANRE     Nr1h3 protein - Danio rerio 
 
   B3KRG6_HUMAN     cDNA FLJ34216 fis, clone FCBBF3022005, highly similar to OXY
   B4DNM6_HUMAN     cDNA FLJ57542, highly similar to Oxysterols receptor LXR-bet
   D1LX57_SACKO     Liver X-like nuclear receptor - Saccoglossus kowalevskii 
 
   C9J2C8_HUMAN     Putative uncharacterized protein NR1H3 - Homo sapiens 
   C9JJ16_HUMAN     Putative uncharacterized protein NR1H3 - Homo sapiens 
   C9JCS0_HUMAN     Putative uncharacterized protein NR1H3 - Homo sapiens 
   C9JBS2_HUMAN     Putative uncharacterized protein NR1H3 - Homo sapiens 
   C9J4R0_HUMAN     Putative uncharacterized protein NR1H3 - Homo sapiens 

SCAN HISTORY SPTR57.15_40.15f 2 300 NSINGLE INITIAL MOTIF SETS LIVERXRECPTR1 Length of motif = 11 Motif number = 1 Liver X receptor motif I - 1 PCODE ST INT KKGPAPKMLGN NR1H3_HUMAN 85 85 KKGPAPKMLGN Q5U0N9_HUMAN 85 85 KKGPAPKMLGN Q4TU03_PIG 85 85 KKGPAPKMLGN Q91X41_MOUSE 83 83 KKGPAPKMLGN NR1H3_RAT 83 83 KKGPAPKMLGN B5MBY7_HUMAN 40 40 KKGPAPKMLGN A2AGR4_MOUSE 83 83 KKGPAPKMLGN C5IUM7_ANAPL 47 47 KKGPAPKMLGN D1MDC5_CAIMO 47 47 KKGPAPKMLGN Q8JHU1_CHICK 47 47 KKGPAPKMLGN Q8AXU8_CHICK 47 47 KKGPAPKMLGN Q56A56_DANRE 52 52 KKGPAPKMLGN C5IU94_CTEID 49 49 KKGPAPKMLGN C4PE87_CYPCA 49 49 KKGPAPKMLGN B8Y3M0_SALSA 102 102 KKGPAPKMLGN B8Y3M1_ONCMY 102 102 KKGPAPKMLGN Q0IHW4_XENTR 76 76 KKGPAPKMLGN Q6GMA2_XENLA 76 76 KKGPAPKMLGH NR1H2_HUMAN 74 74 KKGPAPKMLGH NR1H2_MOUSE 65 65 KKGPAPKMLGH NR1H2_RAT 65 65 KKGPAPKMLGH Q8BP65_MOUSE 62 62 KKGPAPKMLGD Q58CP4_BOVIN 69 69 KKGPAPKMLGN Q4SHF7_TETNG 80 80 LIVERXRECPTR2 Length of motif = 15 Motif number = 2 Liver X receptor motif II - 1 PCODE ST INT ICHSGGHCPMDTYMR NR1H3_HUMAN 133 37 ICHSGGHCPMDTYMR Q5U0N9_HUMAN 133 37 VCHSGGHCPMDTYMR Q4TU03_PIG 133 37 VCHSGGHCPMDTYMR Q91X41_MOUSE 131 37 ICHSGGHCPMDTYMR NR1H3_RAT 131 37 ICHSGGHCPMDTYMR B5MBY7_HUMAN 88 37 VCHSGGHCPMDTYMR A2AGR4_MOUSE 131 37 VCKNGGKCEMDMYMR C5IUM7_ANAPL 95 37 VCKNGGKCEMDMYMR D1MDC5_CAIMO 95 37 VCKNGGKCEMDMYMR Q8JHU1_CHICK 95 37 VCKNGGKCEMDMYMR Q8AXU8_CHICK 95 37 SCKNSGRCEMDMYMR Q56A56_DANRE 100 37 TCKNSGRCEMDMYMR C5IU94_CTEID 97 37 TCKNSGRCEMDMYMR C4PE87_CYPCA 97 37 SCKNNGRCEMDMYMR B8Y3M0_SALSA 150 37 SCKNNGRCEMDMYMR B8Y3M1_ONCMY 150 37 TCKNNGKCQMDMYMR Q0IHW4_XENTR 124 37 SCKNNGKCQMDMYMR Q6GMA2_XENLA 124 37 ACRGGGTCQMDAFMR NR1H2_HUMAN 124 39 ACRGSGTCQMDAFMR NR1H2_MOUSE 115 39 ACRGSGTCQMDAFMR NR1H2_RAT 115 39 ACRGSGTCQMDAFMR Q8BP65_MOUSE 112 39 ACRGGGTCQMDAFMR Q58CP4_BOVIN 119 39 SCKNNGHCEMDMYMR Q4SHF7_TETNG 128 37 LIVERXRECPTR3 Length of motif = 16 Motif number = 3 Liver X receptor motif III - 1 PCODE ST INT TFLKDFSYNREDFAKA NR1H3_HUMAN 314 166 TFLKDFSYNREDFAKA Q5U0N9_HUMAN 314 166 TFLKDFSYNREDFAKA Q4TU03_PIG 314 166 TFLKDFSYNREDFAKA Q91X41_MOUSE 312 166 TFLKDFSYNREDFAKA NR1H3_RAT 312 166 TFLKDFSYNREDFAKA B5MBY7_HUMAN 209 106 TFLKDFSYNREDFAKA A2AGR4_MOUSE 252 106 TFLKDLSYNRDDFAKA C5IUM7_ANAPL 276 166 TFLKDLSYNRDDFAKA D1MDC5_CAIMO 276 166 TFLKDLSYNRDDFAKA Q8JHU1_CHICK 276 166 TFLKDLSYNRDDFAKA Q8AXU8_CHICK 276 166 TFLKDFTYNKEDFAKA Q56A56_DANRE 279 164 TFLKDFSYNKEDFAKA C5IU94_CTEID 276 164 TFLKDFSYNKEDFAKA C4PE87_CYPCA 276 164 TFLKDFSYNKEDFAKA B8Y3M0_SALSA 329 164 TFLKDFSYNKEDFAKA B8Y3M1_ONCMY 329 164 TFLKDFTYSKDDFHRA Q0IHW4_XENTR 308 169 TFLKDFTYSKDDFHRA Q6GMA2_XENLA 308 169 TFLKDFTYSKDDFHRA NR1H2_HUMAN 328 189 TFLKDFTYSKDDFHRA NR1H2_MOUSE 313 183 TFLKDFTYSKDDFHRA NR1H2_RAT 313 183 TFLKDFTYSKDDFHRA Q8BP65_MOUSE 310 183 TFLKDFTYSKDDFHRA Q58CP4_BOVIN 322 188 TFLKDFSYNKEDFAKA Q4SHF7_TETNG 376 233 LIVERXRECPTR4 Length of motif = 14 Motif number = 4 Liver X receptor motif IV - 1 PCODE ST INT EFSRAMNELQLNDA NR1H3_HUMAN 341 11 EFSRAMNELQLNDA Q5U0N9_HUMAN 341 11 EFSRAMNELQLNDA Q4TU03_PIG 341 11 EFSRAMNELQLNDA Q91X41_MOUSE 339 11 EFSRSMNELQLNDA NR1H3_RAT 339 11 EFSRAMNELQLNDA B5MBY7_HUMAN 236 11 EFSRAMNELQLNDA A2AGR4_MOUSE 279 11 EFSKGMNELQLNDA C5IUM7_ANAPL 303 11 EFSKGMNELQLNDA D1MDC5_CAIMO 303 11 EFSKGMNELQLNDA Q8JHU1_CHICK 303 11 EFSKGMNELQLNDA Q8AXU8_CHICK 303 11 EFSKGMNDLHLDEA Q56A56_DANRE 306 11 EFSKGMNDLHLDEA C5IU94_CTEID 303 11 EFSKGMNDLHLDEA C4PE87_CYPCA 303 11 EFSKGMNDLHLDEA B8Y3M0_SALSA 356 11 EFSKGMNDLHLDEA B8Y3M1_ONCMY 356 11 EFSRGMRQMQLDDA Q0IHW4_XENTR 335 11 EFSRGMRQMQLDDA Q6GMA2_XENLA 335 11 EFSRAMRRLGLDDA NR1H2_HUMAN 355 11 EFSRAMRRLGLDDA NR1H2_MOUSE 340 11 EFSRAMRRLGLDDA NR1H2_RAT 340 11 EFSRAMRRLGLDDA Q8BP65_MOUSE 337 11 EFSRAMRRLGLDDA Q58CP4_BOVIN 349 11 EFSKGMNDLHLDEA Q4SHF7_TETNG 403 11 LIVERXRECPTR5 Length of motif = 18 Motif number = 5 Liver X receptor motif V - 1 PCODE ST INT TLSSVHSEQVFALRLQDK NR1H3_HUMAN 416 61 TLSSVHSEQVFALRLQDK Q5U0N9_HUMAN 416 61 TLSSVHSEQVFALRLQDK Q4TU03_PIG 416 61 TLSSVHSEQVFALRLQDK Q91X41_MOUSE 414 61 TLSSVHSEQVFALRLQDK NR1H3_RAT 414 61 TLSSVHSEQVFALRLQDK B5MBY7_HUMAN 311 61 TLSSVHSEQVFALRLQDK A2AGR4_MOUSE 354 61 TLSNVHSEQVFALRLQDK C5IUM7_ANAPL 378 61 TLSNVHSEQVFALRLQDK D1MDC5_CAIMO 378 61 TLSSVHSEQVFALRLQDK Q8JHU1_CHICK 378 61 TLSSVHSEQVFALRLQDK Q8AXU8_CHICK 378 61 TLSSVHSEQVFALRLQDK Q56A56_DANRE 381 61 TLSSVHSEQVFALRLQDK C5IU94_CTEID 378 61 TLSSVHSEQVFALRLQDK C4PE87_CYPCA 378 61 TLSSVHSEQVFALRLQDK B8Y3M0_SALSA 431 61 TLSSVHSEQVFALRLQDK B8Y3M1_ONCMY 431 61 TLSSVHSEQVFALRLQDK Q0IHW4_XENTR 410 61 TLSSVHSEQFFALRLQDK Q6GMA2_XENLA 410 61 TLSSVHSEQVFALRLQDK NR1H2_HUMAN 430 61 TLSSVHSEQVFALRLQDK NR1H2_MOUSE 415 61 TLSSVHSEQVFALRLQDK NR1H2_RAT 415 61 TLSSVHSEQVFALRLQDK Q8BP65_MOUSE 412 61 TLSSVHSEQSSPCGSRTR Q58CP4_BOVIN 424 61 TLSSVHSEQVFALRLQDK Q4SHF7_TETNG 478 61 FINAL MOTIF SETS LIVERXRECPTR1 Length of motif = 11 Motif number = 1 Liver X receptor motif I - 2 PCODE ST INT KKGPAPKMLGN A2AGR4_MOUSE 83 83 KKGPAPKMLGN Q91X41_MOUSE 83 83 KKGPAPKMLGN Q4TU03_PIG 85 85 KKGPAPKMLGN NR1H3_MOUSE 83 83 KKGPAPKMLGN NR1H3_BOVIN 85 85 KKGPAPKMLGN A5A4X4_PIG 85 85 KKGPAPKMLGN A4UVT2_PIG 85 85 KKGPAPKMLGN B2R8B9_HUMAN 85 85 KKGPAPKMLGN Q8IW13_HUMAN 40 40 KKGPAPKMLGN Q5U0N9_HUMAN 85 85 KKGPAPKMLGN NR1H3_HUMAN 85 85 KKGPAPKMLGN B5MBY7_HUMAN 40 40 KKGPAPKMLGN B4DXU5_HUMAN 91 91 KKGPAPKMLGN B6ZGS8_HUMAN 85 85 KKGPAPKMLGN NR1H3_RAT 83 83 KKGPAPKMLGN Q5I035_RAT 83 83 RKGPAPKMLGN B3KV37_HUMAN 85 85 KKGPAPKMLGN Q8AXU8_CHICK 47 47 KKGPAPKMLGN Q8JHU1_CHICK 47 47 KKGPAPKMLGN C5IUM7_ANAPL 47 47 KKGPAPKMLGN D1MDC5_CAIMO 47 47 KKGPAPKMLGN Q4SHF7_TETNG 80 80 KKGPAPKMLGH B6ZGS7_HUMAN 74 74 KKGPAPKMLGH Q6IBU6_HUMAN 74 74 KKGPAPKMLGH Q68CY8_HUMAN 74 74 KKGPAPKMLGH NR1H2_HUMAN 74 74 KKGPAPKMLGN B8Y3M0_SALSA 102 102 KKGPAPKMLGN B8Y3M1_ONCMY 102 102 KKGPAPKMLGD NR1H2_BOVIN 69 69 KKGPAPKMLGD Q5BIN1_BOVIN 69 69 KKGPAPKMLGD Q58D83_BOVIN 66 66 KKGPAPKMLGN C4PE87_CYPCA 49 49 KKGPAPKMLGN C5IU94_CTEID 49 49 KKGPAPKMLGN Q56A56_DANRE 52 52 KKGPAPKMLGH NR1H2_MOUSE 65 65 KKGPAPKMLGH Q8BP65_MOUSE 62 62 KKGPAPKMLGH NR1H2_RAT 65 65 KKGPAPKMLGN Q0IHW4_XENTR 76 76 KKGPAPKMLGN Q6GMA2_XENLA 76 76 KKGPAPKMLGD Q58CP4_BOVIN 69 69 LIVERXRECPTR2 Length of motif = 15 Motif number = 2 Liver X receptor motif II - 2 PCODE ST INT VCHSGGHCPMDTYMR A2AGR4_MOUSE 131 37 VCHSGGHCPMDTYMR Q91X41_MOUSE 131 37 VCHSGGHCPMDTYMR Q4TU03_PIG 133 37 VCHSGGHCPMDTYMR NR1H3_MOUSE 131 37 VCHSGGHCPMDTYMR NR1H3_BOVIN 133 37 VCHSGGHCPMDTYMR A5A4X4_PIG 133 37 VCHSGGHCPMDTYMR A4UVT2_PIG 133 37 ICHSGGHCPMDTYMR B2R8B9_HUMAN 133 37 ICHSGGHCPMDTYMR Q8IW13_HUMAN 88 37 ICHSGGHCPMDTYMR Q5U0N9_HUMAN 133 37 ICHSGGHCPMDTYMR NR1H3_HUMAN 133 37 ICHSGGHCPMDTYMR B5MBY7_HUMAN 88 37 ICHSGGHCPMDTYMR B4DXU5_HUMAN 139 37 VCHSGGHCPMDTYMR B6ZGS8_HUMAN 133 37 ICHSGGHCPMDTYMR NR1H3_RAT 131 37 ICHSGGHCPMDTYMR Q5I035_RAT 131 37 ICHSGGHCPMDTYMR B3KV37_HUMAN 133 37 VCKNGGKCEMDMYMR Q8AXU8_CHICK 95 37 VCKNGGKCEMDMYMR Q8JHU1_CHICK 95 37 VCKNGGKCEMDMYMR C5IUM7_ANAPL 95 37 VCKNGGKCEMDMYMR D1MDC5_CAIMO 95 37 SCKNNGHCEMDMYMR Q4SHF7_TETNG 128 37 ACRGGGTCQMDAFMR B6ZGS7_HUMAN 124 39 ACRGGGTCQMDAFMR Q6IBU6_HUMAN 124 39 ACRGGGTCQMDAFMR Q68CY8_HUMAN 124 39 ACRGGGTCQMDAFMR NR1H2_HUMAN 124 39 SCKNNGRCEMDMYMR B8Y3M0_SALSA 150 37 SCKNNGRCEMDMYMR B8Y3M1_ONCMY 150 37 ACRGGGTCQMDAFMR NR1H2_BOVIN 119 39 ACRGGGTCQMDAFMR Q5BIN1_BOVIN 119 39 ACRGGGTCQMDAFMR Q58D83_BOVIN 116 39 TCKNSGRCEMDMYMR C4PE87_CYPCA 97 37 TCKNSGRCEMDMYMR C5IU94_CTEID 97 37 SCKNSGRCEMDMYMR Q56A56_DANRE 100 37 ACRGSGTCQMDAFMR NR1H2_MOUSE 115 39 ACRGSGTCQMDAFMR Q8BP65_MOUSE 112 39 ACRGSGTCQMDAFMR NR1H2_RAT 115 39 TCKNNGKCQMDMYMR Q0IHW4_XENTR 124 37 SCKNNGKCQMDMYMR Q6GMA2_XENLA 124 37 ACRGGGTCQMDAFMR Q58CP4_BOVIN 119 39 LIVERXRECPTR3 Length of motif = 16 Motif number = 3 Liver X receptor motif III - 2 PCODE ST INT TFLKDFSYNREDFAKA A2AGR4_MOUSE 252 106 TFLKDFSYNREDFAKA Q91X41_MOUSE 312 166 TFLKDFSYNREDFAKA Q4TU03_PIG 314 166 TFLKDFSYNREDFAKA NR1H3_MOUSE 312 166 TFLKDFSYNREDFAKA NR1H3_BOVIN 314 166 TFLKDFSYNREDFAKA A5A4X4_PIG 314 166 TFLKDFSYNREDFAKA A4UVT2_PIG 314 166 TFLKDFSYNREDFAKA B2R8B9_HUMAN 314 166 TFLKDFSYNREDFAKA Q8IW13_HUMAN 269 166 TFLKDFSYNREDFAKA Q5U0N9_HUMAN 314 166 TFLKDFSYNREDFAKA NR1H3_HUMAN 314 166 TFLKDFSYNREDFAKA B5MBY7_HUMAN 209 106 TFLKDFSYNREDFAKA B4DXU5_HUMAN 320 166 TFLKDFSYNREDFAKA B6ZGS8_HUMAN 314 166 TFLKDFSYNREDFAKA NR1H3_RAT 312 166 TFLKDFSYNREDFAKA Q5I035_RAT 312 166 TFLKDFSYNREDFAKA B3KV37_HUMAN 314 166 TFLKDLSYNRDDFAKA Q8AXU8_CHICK 276 166 TFLKDLSYNRDDFAKA Q8JHU1_CHICK 276 166 TFLKDLSYNRDDFAKA C5IUM7_ANAPL 276 166 TFLKDLSYNRDDFAKA D1MDC5_CAIMO 276 166 TFLKDFSYNKEDFAKA Q4SHF7_TETNG 376 233 TFLKDFTYSKDDFHRA B6ZGS7_HUMAN 328 189 TFLKDFTYSKDDFHRA Q6IBU6_HUMAN 328 189 TFLKDFTYSKDDFHRA Q68CY8_HUMAN 328 189 TFLKDFTYSKDDFHRA NR1H2_HUMAN 328 189 TFLKDFSYNKEDFAKA B8Y3M0_SALSA 329 164 TFLKDFSYNKEDFAKA B8Y3M1_ONCMY 329 164 TFLKDFTYSKDDFHRA NR1H2_BOVIN 322 188 TFLKDFTYSKDDFHRA Q5BIN1_BOVIN 322 188 TFLKDFTYSKDDFHRA Q58D83_BOVIN 319 188 TFLKDFSYNKEDFAKA C4PE87_CYPCA 276 164 TFLKDFSYNKEDFAKA C5IU94_CTEID 276 164 TFLKDFTYNKEDFAKA Q56A56_DANRE 279 164 TFLKDFTYSKDDFHRA NR1H2_MOUSE 313 183 TFLKDFTYSKDDFHRA Q8BP65_MOUSE 310 183 TFLKDFTYSKDDFHRA NR1H2_RAT 313 183 TFLKDFTYSKDDFHRA Q0IHW4_XENTR 308 169 TFLKDFTYSKDDFHRA Q6GMA2_XENLA 308 169 TFLKDFTYSKDDFHRA Q58CP4_BOVIN 322 188 LIVERXRECPTR4 Length of motif = 14 Motif number = 4 Liver X receptor motif IV - 2 PCODE ST INT EFSRAMNELQLNDA A2AGR4_MOUSE 279 11 EFSRAMNELQLNDA Q91X41_MOUSE 339 11 EFSRAMNELQLNDA Q4TU03_PIG 341 11 EFSRAMNELQLNDA NR1H3_MOUSE 339 11 EFSRAMNELQLNDA NR1H3_BOVIN 341 11 EFSRAMNELQLNDA A5A4X4_PIG 341 11 EFSRAMNELQLNDA A4UVT2_PIG 341 11 EFSRAMNELQLNDA B2R8B9_HUMAN 341 11 EFSRAMNELQLNDA Q8IW13_HUMAN 296 11 EFSRAMNELQLNDA Q5U0N9_HUMAN 341 11 EFSRAMNELQLNDA NR1H3_HUMAN 341 11 EFSRAMNELQLNDA B5MBY7_HUMAN 236 11 EFSRAMNELQLNDA B4DXU5_HUMAN 347 11 EFSRAMNELQLNDA B6ZGS8_HUMAN 341 11 EFSRSMNELQLNDA NR1H3_RAT 339 11 EFSRSMNELQLNDA Q5I035_RAT 339 11 EFSRAMNELQLNDA B3KV37_HUMAN 341 11 EFSKGMNELQLNDA Q8AXU8_CHICK 303 11 EFSKGMNELQLNDA Q8JHU1_CHICK 303 11 EFSKGMNELQLNDA C5IUM7_ANAPL 303 11 EFSKGMNELQLNDA D1MDC5_CAIMO 303 11 EFSKGMNDLHLDEA Q4SHF7_TETNG 403 11 EFSRAMRRLGLDDA B6ZGS7_HUMAN 355 11 EFSRAMRRLGLDDA Q6IBU6_HUMAN 355 11 EFSRAMRRLGLDDA Q68CY8_HUMAN 355 11 EFSRAMRRLGLDDA NR1H2_HUMAN 355 11 EFSKGMNDLHLDEA B8Y3M0_SALSA 356 11 EFSKGMNDLHLDEA B8Y3M1_ONCMY 356 11 EFSRAMRRLGLDDA NR1H2_BOVIN 349 11 EFSRAMRRLGLDDA Q5BIN1_BOVIN 349 11 EFSRAMRRLGLDDA Q58D83_BOVIN 346 11 EFSKGMNDLHLDEA C4PE87_CYPCA 303 11 EFSKGMNDLHLDEA C5IU94_CTEID 303 11 EFSKGMNDLHLDEA Q56A56_DANRE 306 11 EFSRAMRRLGLDDA NR1H2_MOUSE 340 11 EFSRAMRRLGLDDA Q8BP65_MOUSE 337 11 EFSRAMRRLGLDDA NR1H2_RAT 340 11 EFSRGMRQMQLDDA Q0IHW4_XENTR 335 11 EFSRGMRQMQLDDA Q6GMA2_XENLA 335 11 EFSRAMRRLGLDDA Q58CP4_BOVIN 349 11 LIVERXRECPTR5 Length of motif = 18 Motif number = 5 Liver X receptor motif V - 2 PCODE ST INT TLSSVHSEQVFALRLQDK A2AGR4_MOUSE 354 61 TLSSVHSEQVFALRLQDK Q91X41_MOUSE 414 61 TLSSVHSEQVFALRLQDK Q4TU03_PIG 416 61 TLSSVHSEQVFALRLQDK NR1H3_MOUSE 414 61 TLSSVHSEQVFALRLQDK NR1H3_BOVIN 416 61 TLSSVHSEQVFALRLQDK A5A4X4_PIG 416 61 TLSSVHSEQVFALRLQDK A4UVT2_PIG 416 61 TLSSVHSEQVFALRLQDK B2R8B9_HUMAN 416 61 TLSSVHSEQVFALRLQDK Q8IW13_HUMAN 371 61 TLSSVHSEQVFALRLQDK Q5U0N9_HUMAN 416 61 TLSSVHSEQVFALRLQDK NR1H3_HUMAN 416 61 TLSSVHSEQVFALRLQDK B5MBY7_HUMAN 311 61 TLSSVHSEQVFALRLQDK B4DXU5_HUMAN 422 61 TLSSVHSEQVSALRLQDK B6ZGS8_HUMAN 416 61 TLSSVHSEQVFALRLQDK NR1H3_RAT 414 61 TLSSVHSEQVFALRLQDK Q5I035_RAT 414 61 TLSSVHSEQVFALRLQDK B3KV37_HUMAN 416 61 TLSSVHSEQVFALRLQDK Q8AXU8_CHICK 378 61 TLSSVHSEQVFALRLQDK Q8JHU1_CHICK 378 61 TLSNVHSEQVFALRLQDK C5IUM7_ANAPL 378 61 TLSNVHSEQVFALRLQDK D1MDC5_CAIMO 378 61 TLSSVHSEQVFALRLQDK Q4SHF7_TETNG 478 61 TLSSVHSEQVFALRLQDK B6ZGS7_HUMAN 430 61 TLSSVHSEQVFALRLQDK Q6IBU6_HUMAN 430 61 TLSSVHSEQVFALRLQDK Q68CY8_HUMAN 429 60 TLSSVHSEQVFALRLQDK NR1H2_HUMAN 430 61 TLSSVHSEQVFALRLQDK B8Y3M0_SALSA 431 61 TLSSVHSEQVFALRLQDK B8Y3M1_ONCMY 431 61 TLSSVHSEQVFALRLQDK NR1H2_BOVIN 424 61 TLSSVHSEQVFALRLQDK Q5BIN1_BOVIN 424 61 TLSSVHSEQVFALRLQDK Q58D83_BOVIN 421 61 TLSSVHSEQVFALRLQDK C4PE87_CYPCA 378 61 TLSSVHSEQVFALRLQDK C5IU94_CTEID 378 61 TLSSVHSEQVFALRLQDK Q56A56_DANRE 381 61 TLSSVHSEQVFALRLQDK NR1H2_MOUSE 415 61 TLSSVHSEQVFALRLQDK Q8BP65_MOUSE 412 61 TLSSVHSEQVFALRLQDK NR1H2_RAT 415 61 TLSSVHSEQVFALRLQDK Q0IHW4_XENTR 410 61 TLSSVHSEQFFALRLQDK Q6GMA2_XENLA 410 61 TLSSVHSEQSSPCGSRTR Q58CP4_BOVIN 424 61

User query: Display/Full Code "LIVERXRECPTR"