WORKLIST ENTRIES (1):
LIVERXRECPTR View alignment Liver X receptor signature
Type of fingerprint: COMPOUND with 5 elements
Links:
PRINTS; PR00047 STROIDFINGER; PR00398 STRDHORMONER
PRINTS; PR00521 ANDROGENR; PR01282 COUPTNFACTOR; PR01283 ECDYSTEROIDR
PRINTS; PR00528 GLCORTICOIDR; PR01284 NUCLEARECPTR; PR00350 VITAMINDR
PRINTS; PR00544 PROGESTRONER; PR01288 PROXISOMEPAR; PR00545 RETINOIDXR
PRINTS; PR01293 RORNUCRECPTR; PR00546 THYROIDHORMR; PR00543 OESTROGENR
PDB; 1P8D 3Dinfo; 1PQ6 3Dinfo; 1PQ9 3Dinfo; 1UPV 3Dinfo; 1UPW 3Dinfo
SCOP; 1P8D; 1PQ6; 1PQ9; 1UPV; 1UPW
CATH; 1P8D; 1PQ6; 1PQ9; 1UPV; 1UPW
MIM; 602423; 600380
Creation date 23-JUL-2010
1. NUCLEAR RECEPTORS NOMENCLATURE COMMITTEE
A unified nomenclature system for the nuclear receptor superfamily.
CELL 97 161-163 (1999).
2. NISHIKAWA, J-I., KITAURA, M., IMAGAWA, M. AND NISHIHARA, T.
Vitamin D receptor contains multiple dimerisation interfaces that
are functionally different.
NUCLEIC ACIDS RES. 23(4) 606-611 (1995).
3. DE VOS, P., SCHMITT, J., VERHOEVEN, G. AND STUNNENBERG, G.
Human androgen receptor expressed in HeLa cells activates transcription
in vitro.
NUCLEIC ACIDS RES. 22(7) 1161-1166 (1994).
4. ZHAO, C. AND DAHLMAN-WRIGHT, K.
Liver X receptor in cholesterol metabolism.
J.ENDOCRINOL. 204 233-240 (2010).
5. KORF, H., VANDER BEKEN, S., ROMANO, M., STEFFENSEN, K., STIJLEMANS, B.,
GUSTAFSSON, J., GROOTEN, J. AND HUYGEN K.
Liver X receptors contribute to the protective immune response against
Mycobacterium tuberculosis in mice.
J.CLIN.INVEST. 119 1626-1637 (2009).
Steroid or nuclear hormone receptors (NRs) constitute an important super-
family of transcription regulators that are involved in widely diverse
physiological functions, including control of embryonic development, cell
differentiation and homeostasis [1]. Members of the superfamily include the
steroid hormone receptors and receptors for thyroid hormone, retinoids,
1,25-dihydroxy-vitamin D3 and a variety of other ligands. The proteins
function as dimeric molecules in nuclei to regulate the transcription of
target genes in a ligand-responsive manner [2,3]. In addition to C-terminal
ligand-binding domains, these nuclear receptors contain a highly-conserved,
N-terminal zinc-finger that mediates specific binding to target DNA
sequences, termed ligand-responsive elements. In the absence of ligand,
steroid hormone receptors are thought to be weakly associated with nuclear
components; hormone binding greatly increases receptor affinity.
NRs are extremely important in medical research, a large number of them
being implicated in diseases such as cancer, diabetes, hormone resistance
syndromes, etc. [1]. While several NRs act as ligand-inducible transcription
factors, many do not yet have a defined ligand and are accordingly termed
"orphan" receptors. During the last decade, more than 300 NRs have been
described, many of which are orphans, which cannot easily be named due to
current nomenclature confusions in the literature. However, a new system
has recently been introduced in an attempt to rationalise the increasingly
complex set of names used to describe superfamily members [1].
Liver X receptors (LXRs) are nuclear receptors that regulate the metabolism
of several important lipids, including oxysterols [4]. There are two LXR
isoforms, termed alpha and beta, which, upon activation, form heterodimers
with retinoid X receptors and bind to an LXR response element found in the
promoter region of their target genes. In addition to their involvement in
lipid metabolism, LXRs also act as key regulators of macrophage function,
and have roles in inflammation and immunity [5].
LIVERXRECPTR is a 5-element fingerprint that provides a signature for the
liver X receptors. The fingerprint was derived from an initial alignment
of 24 sequences: the motifs were drawn from conserved regions spanning
virtually the full alignment length - motif 1 lies in the N-terminal region;
motif 2 resides in the zinc-binding region shared by the steroid hormone
receptor family; motifs 3 and 4 lie in the C-terminal ligand-binding region;
and motif 5 resides at the C-terminus. Two iterations on SPTR57.15_40.15f
were required to reach convergence, at which point a true set comprising 40
sequences was identified. Ten partial matches were also found, all of which
are translated nucleotide sequences that fail to match one or more motifs.
SUMMARY INFORMATION
40 codes involving 5 elements
2 codes involving 4 elements
3 codes involving 3 elements
5 codes involving 2 elements
COMPOSITE FINGERPRINT INDEX
5| 40 40 40 40 40
4| 1 2 2 2 1
3| 0 1 2 3 3
2| 5 5 0 0 0
--+--------------------------
| 1 2 3 4 5
True positives..
A2AGR4_MOUSE Q91X41_MOUSE Q4TU03_PIG NR1H3_MOUSE
NR1H3_BOVIN A5A4X4_PIG A4UVT2_PIG B2R8B9_HUMAN
Q8IW13_HUMAN Q5U0N9_HUMAN NR1H3_HUMAN B5MBY7_HUMAN
B4DXU5_HUMAN B6ZGS8_HUMAN NR1H3_RAT Q5I035_RAT
B3KV37_HUMAN Q8AXU8_CHICK Q8JHU1_CHICK C5IUM7_ANAPL
D1MDC5_CAIMO Q4SHF7_TETNG B6ZGS7_HUMAN Q6IBU6_HUMAN
Q68CY8_HUMAN NR1H2_HUMAN B8Y3M0_SALSA B8Y3M1_ONCMY
NR1H2_BOVIN Q5BIN1_BOVIN Q58D83_BOVIN C4PE87_CYPCA
C5IU94_CTEID Q56A56_DANRE NR1H2_MOUSE Q8BP65_MOUSE
NR1H2_RAT Q0IHW4_XENTR Q6GMA2_XENLA Q58CP4_BOVIN
Subfamily: Codes involving 4 elements
Subfamily True positives..
Q5REL4_PONAB A1L1Z8_DANRE
Subfamily: Codes involving 3 elements
Subfamily True positives..
B3KRG6_HUMAN B4DNM6_HUMAN D1LX57_SACKO
Subfamily: Codes involving 2 elements
Subfamily True positives..
C9J2C8_HUMAN C9JJ16_HUMAN C9JCS0_HUMAN C9JBS2_HUMAN
C9J4R0_HUMAN
PROTEIN TITLES
A2AGR4_MOUSE Nuclear receptor subfamily 1 group H member 3 - Mus musculus
Q91X41_MOUSE Nr1h3 protein - Mus musculus
Q4TU03_PIG Liver X receptor alpha - Sus scrofa
NR1H3_MOUSE Oxysterols receptor LXR-alpha - Mus musculus
NR1H3_BOVIN Oxysterols receptor LXR-alpha - Bos taurus
A5A4X4_PIG Liver X receptor alpha - Sus scrofa
A4UVT2_PIG Liver X receptor alpha - Sus scrofa
B2R8B9_HUMAN cDNA, FLJ93824, highly similar to Homo sapiens nuclear recep
Q8IW13_HUMAN NR1H3 protein - Homo sapiens
Q5U0N9_HUMAN Nuclear receptor subfamily 1, group H, member 3 - Homo sapie
NR1H3_HUMAN Oxysterols receptor LXR-alpha - Homo sapiens
B5MBY7_HUMAN Putative uncharacterized protein NR1H3 - Homo sapiens
B4DXU5_HUMAN cDNA FLJ56172, highly similar to Oxysterols receptor LXR-alp
B6ZGS8_HUMAN Liver X receptor alpha - Homo sapiens
NR1H3_RAT Oxysterols receptor LXR-alpha - Rattus norvegicus
Q5I035_RAT Nuclear receptor subfamily 1, group H, member 3 - Rattus nor
B3KV37_HUMAN cDNA FLJ16096 fis, clone SPLEN2006232, highly similar to OXY
Q8AXU8_CHICK Liver X receptor alpha - Gallus gallus
Q8JHU1_CHICK Liver X receptor - Gallus gallus
C5IUM7_ANAPL Liver X receptor alpha - Anas platyrhynchos
D1MDC5_CAIMO Liver X receptor alpha protein - Cairina moschata
Q4SHF7_TETNG Chromosome 5 SCAF14581, whole genome shotgun sequence - Tetr
B6ZGS7_HUMAN Liver X receptor beta - Homo sapiens
Q6IBU6_HUMAN NR1H2 protein - Homo sapiens
Q68CY8_HUMAN Putative uncharacterized protein DKFZp686D1580 - Homo sapien
NR1H2_HUMAN Oxysterols receptor LXR-beta - Homo sapiens
B8Y3M0_SALSA Liver X receptor - Salmo salar
B8Y3M1_ONCMY Liver X receptor - Oncorhynchus mykiss
NR1H2_BOVIN Oxysterols receptor LXR-beta - Bos taurus
Q5BIN1_BOVIN Nuclear receptor subfamily 1, group H, member 2 - Bos taurus
Q58D83_BOVIN Nuclear receptor subfamily 1, group H, member 2 - Bos taurus
C4PE87_CYPCA Liver X receptor - Cyprinus carpio
C5IU94_CTEID Liver X receptor - Ctenopharyngodon idella
Q56A56_DANRE Nuclear receptor subfamily 1, group H, member 3 - Danio reri
NR1H2_MOUSE Oxysterols receptor LXR-beta - Mus musculus
Q8BP65_MOUSE Putative uncharacterized protein - Mus musculus
NR1H2_RAT Oxysterols receptor LXR-beta - Rattus norvegicus
Q0IHW4_XENTR Nuclear receptor subfamily 1, group H, member 2 - Xenopus tr
Q6GMA2_XENLA MGC81974 protein - Xenopus laevis
Q58CP4_BOVIN Nuclear receptor subfamily 1, group H, member 2 - Bos taurus
Q5REL4_PONAB Putative uncharacterized protein DKFZp468A0622 - Pongo abeli
A1L1Z8_DANRE Nr1h3 protein - Danio rerio
B3KRG6_HUMAN cDNA FLJ34216 fis, clone FCBBF3022005, highly similar to OXY
B4DNM6_HUMAN cDNA FLJ57542, highly similar to Oxysterols receptor LXR-bet
D1LX57_SACKO Liver X-like nuclear receptor - Saccoglossus kowalevskii
C9J2C8_HUMAN Putative uncharacterized protein NR1H3 - Homo sapiens
C9JJ16_HUMAN Putative uncharacterized protein NR1H3 - Homo sapiens
C9JCS0_HUMAN Putative uncharacterized protein NR1H3 - Homo sapiens
C9JBS2_HUMAN Putative uncharacterized protein NR1H3 - Homo sapiens
C9J4R0_HUMAN Putative uncharacterized protein NR1H3 - Homo sapiens
SCAN HISTORY
SPTR57.15_40.15f 2 300 NSINGLE
INITIAL MOTIF SETS
LIVERXRECPTR1 Length of motif = 11 Motif number = 1
Liver X receptor motif I - 1
PCODE ST INT
KKGPAPKMLGN NR1H3_HUMAN 85 85
KKGPAPKMLGN Q5U0N9_HUMAN 85 85
KKGPAPKMLGN Q4TU03_PIG 85 85
KKGPAPKMLGN Q91X41_MOUSE 83 83
KKGPAPKMLGN NR1H3_RAT 83 83
KKGPAPKMLGN B5MBY7_HUMAN 40 40
KKGPAPKMLGN A2AGR4_MOUSE 83 83
KKGPAPKMLGN C5IUM7_ANAPL 47 47
KKGPAPKMLGN D1MDC5_CAIMO 47 47
KKGPAPKMLGN Q8JHU1_CHICK 47 47
KKGPAPKMLGN Q8AXU8_CHICK 47 47
KKGPAPKMLGN Q56A56_DANRE 52 52
KKGPAPKMLGN C5IU94_CTEID 49 49
KKGPAPKMLGN C4PE87_CYPCA 49 49
KKGPAPKMLGN B8Y3M0_SALSA 102 102
KKGPAPKMLGN B8Y3M1_ONCMY 102 102
KKGPAPKMLGN Q0IHW4_XENTR 76 76
KKGPAPKMLGN Q6GMA2_XENLA 76 76
KKGPAPKMLGH NR1H2_HUMAN 74 74
KKGPAPKMLGH NR1H2_MOUSE 65 65
KKGPAPKMLGH NR1H2_RAT 65 65
KKGPAPKMLGH Q8BP65_MOUSE 62 62
KKGPAPKMLGD Q58CP4_BOVIN 69 69
KKGPAPKMLGN Q4SHF7_TETNG 80 80
LIVERXRECPTR2 Length of motif = 15 Motif number = 2
Liver X receptor motif II - 1
PCODE ST INT
ICHSGGHCPMDTYMR NR1H3_HUMAN 133 37
ICHSGGHCPMDTYMR Q5U0N9_HUMAN 133 37
VCHSGGHCPMDTYMR Q4TU03_PIG 133 37
VCHSGGHCPMDTYMR Q91X41_MOUSE 131 37
ICHSGGHCPMDTYMR NR1H3_RAT 131 37
ICHSGGHCPMDTYMR B5MBY7_HUMAN 88 37
VCHSGGHCPMDTYMR A2AGR4_MOUSE 131 37
VCKNGGKCEMDMYMR C5IUM7_ANAPL 95 37
VCKNGGKCEMDMYMR D1MDC5_CAIMO 95 37
VCKNGGKCEMDMYMR Q8JHU1_CHICK 95 37
VCKNGGKCEMDMYMR Q8AXU8_CHICK 95 37
SCKNSGRCEMDMYMR Q56A56_DANRE 100 37
TCKNSGRCEMDMYMR C5IU94_CTEID 97 37
TCKNSGRCEMDMYMR C4PE87_CYPCA 97 37
SCKNNGRCEMDMYMR B8Y3M0_SALSA 150 37
SCKNNGRCEMDMYMR B8Y3M1_ONCMY 150 37
TCKNNGKCQMDMYMR Q0IHW4_XENTR 124 37
SCKNNGKCQMDMYMR Q6GMA2_XENLA 124 37
ACRGGGTCQMDAFMR NR1H2_HUMAN 124 39
ACRGSGTCQMDAFMR NR1H2_MOUSE 115 39
ACRGSGTCQMDAFMR NR1H2_RAT 115 39
ACRGSGTCQMDAFMR Q8BP65_MOUSE 112 39
ACRGGGTCQMDAFMR Q58CP4_BOVIN 119 39
SCKNNGHCEMDMYMR Q4SHF7_TETNG 128 37
LIVERXRECPTR3 Length of motif = 16 Motif number = 3
Liver X receptor motif III - 1
PCODE ST INT
TFLKDFSYNREDFAKA NR1H3_HUMAN 314 166
TFLKDFSYNREDFAKA Q5U0N9_HUMAN 314 166
TFLKDFSYNREDFAKA Q4TU03_PIG 314 166
TFLKDFSYNREDFAKA Q91X41_MOUSE 312 166
TFLKDFSYNREDFAKA NR1H3_RAT 312 166
TFLKDFSYNREDFAKA B5MBY7_HUMAN 209 106
TFLKDFSYNREDFAKA A2AGR4_MOUSE 252 106
TFLKDLSYNRDDFAKA C5IUM7_ANAPL 276 166
TFLKDLSYNRDDFAKA D1MDC5_CAIMO 276 166
TFLKDLSYNRDDFAKA Q8JHU1_CHICK 276 166
TFLKDLSYNRDDFAKA Q8AXU8_CHICK 276 166
TFLKDFTYNKEDFAKA Q56A56_DANRE 279 164
TFLKDFSYNKEDFAKA C5IU94_CTEID 276 164
TFLKDFSYNKEDFAKA C4PE87_CYPCA 276 164
TFLKDFSYNKEDFAKA B8Y3M0_SALSA 329 164
TFLKDFSYNKEDFAKA B8Y3M1_ONCMY 329 164
TFLKDFTYSKDDFHRA Q0IHW4_XENTR 308 169
TFLKDFTYSKDDFHRA Q6GMA2_XENLA 308 169
TFLKDFTYSKDDFHRA NR1H2_HUMAN 328 189
TFLKDFTYSKDDFHRA NR1H2_MOUSE 313 183
TFLKDFTYSKDDFHRA NR1H2_RAT 313 183
TFLKDFTYSKDDFHRA Q8BP65_MOUSE 310 183
TFLKDFTYSKDDFHRA Q58CP4_BOVIN 322 188
TFLKDFSYNKEDFAKA Q4SHF7_TETNG 376 233
LIVERXRECPTR4 Length of motif = 14 Motif number = 4
Liver X receptor motif IV - 1
PCODE ST INT
EFSRAMNELQLNDA NR1H3_HUMAN 341 11
EFSRAMNELQLNDA Q5U0N9_HUMAN 341 11
EFSRAMNELQLNDA Q4TU03_PIG 341 11
EFSRAMNELQLNDA Q91X41_MOUSE 339 11
EFSRSMNELQLNDA NR1H3_RAT 339 11
EFSRAMNELQLNDA B5MBY7_HUMAN 236 11
EFSRAMNELQLNDA A2AGR4_MOUSE 279 11
EFSKGMNELQLNDA C5IUM7_ANAPL 303 11
EFSKGMNELQLNDA D1MDC5_CAIMO 303 11
EFSKGMNELQLNDA Q8JHU1_CHICK 303 11
EFSKGMNELQLNDA Q8AXU8_CHICK 303 11
EFSKGMNDLHLDEA Q56A56_DANRE 306 11
EFSKGMNDLHLDEA C5IU94_CTEID 303 11
EFSKGMNDLHLDEA C4PE87_CYPCA 303 11
EFSKGMNDLHLDEA B8Y3M0_SALSA 356 11
EFSKGMNDLHLDEA B8Y3M1_ONCMY 356 11
EFSRGMRQMQLDDA Q0IHW4_XENTR 335 11
EFSRGMRQMQLDDA Q6GMA2_XENLA 335 11
EFSRAMRRLGLDDA NR1H2_HUMAN 355 11
EFSRAMRRLGLDDA NR1H2_MOUSE 340 11
EFSRAMRRLGLDDA NR1H2_RAT 340 11
EFSRAMRRLGLDDA Q8BP65_MOUSE 337 11
EFSRAMRRLGLDDA Q58CP4_BOVIN 349 11
EFSKGMNDLHLDEA Q4SHF7_TETNG 403 11
LIVERXRECPTR5 Length of motif = 18 Motif number = 5
Liver X receptor motif V - 1
PCODE ST INT
TLSSVHSEQVFALRLQDK NR1H3_HUMAN 416 61
TLSSVHSEQVFALRLQDK Q5U0N9_HUMAN 416 61
TLSSVHSEQVFALRLQDK Q4TU03_PIG 416 61
TLSSVHSEQVFALRLQDK Q91X41_MOUSE 414 61
TLSSVHSEQVFALRLQDK NR1H3_RAT 414 61
TLSSVHSEQVFALRLQDK B5MBY7_HUMAN 311 61
TLSSVHSEQVFALRLQDK A2AGR4_MOUSE 354 61
TLSNVHSEQVFALRLQDK C5IUM7_ANAPL 378 61
TLSNVHSEQVFALRLQDK D1MDC5_CAIMO 378 61
TLSSVHSEQVFALRLQDK Q8JHU1_CHICK 378 61
TLSSVHSEQVFALRLQDK Q8AXU8_CHICK 378 61
TLSSVHSEQVFALRLQDK Q56A56_DANRE 381 61
TLSSVHSEQVFALRLQDK C5IU94_CTEID 378 61
TLSSVHSEQVFALRLQDK C4PE87_CYPCA 378 61
TLSSVHSEQVFALRLQDK B8Y3M0_SALSA 431 61
TLSSVHSEQVFALRLQDK B8Y3M1_ONCMY 431 61
TLSSVHSEQVFALRLQDK Q0IHW4_XENTR 410 61
TLSSVHSEQFFALRLQDK Q6GMA2_XENLA 410 61
TLSSVHSEQVFALRLQDK NR1H2_HUMAN 430 61
TLSSVHSEQVFALRLQDK NR1H2_MOUSE 415 61
TLSSVHSEQVFALRLQDK NR1H2_RAT 415 61
TLSSVHSEQVFALRLQDK Q8BP65_MOUSE 412 61
TLSSVHSEQSSPCGSRTR Q58CP4_BOVIN 424 61
TLSSVHSEQVFALRLQDK Q4SHF7_TETNG 478 61
FINAL MOTIF SETS
LIVERXRECPTR1 Length of motif = 11 Motif number = 1
Liver X receptor motif I - 2
PCODE ST INT
KKGPAPKMLGN A2AGR4_MOUSE 83 83
KKGPAPKMLGN Q91X41_MOUSE 83 83
KKGPAPKMLGN Q4TU03_PIG 85 85
KKGPAPKMLGN NR1H3_MOUSE 83 83
KKGPAPKMLGN NR1H3_BOVIN 85 85
KKGPAPKMLGN A5A4X4_PIG 85 85
KKGPAPKMLGN A4UVT2_PIG 85 85
KKGPAPKMLGN B2R8B9_HUMAN 85 85
KKGPAPKMLGN Q8IW13_HUMAN 40 40
KKGPAPKMLGN Q5U0N9_HUMAN 85 85
KKGPAPKMLGN NR1H3_HUMAN 85 85
KKGPAPKMLGN B5MBY7_HUMAN 40 40
KKGPAPKMLGN B4DXU5_HUMAN 91 91
KKGPAPKMLGN B6ZGS8_HUMAN 85 85
KKGPAPKMLGN NR1H3_RAT 83 83
KKGPAPKMLGN Q5I035_RAT 83 83
RKGPAPKMLGN B3KV37_HUMAN 85 85
KKGPAPKMLGN Q8AXU8_CHICK 47 47
KKGPAPKMLGN Q8JHU1_CHICK 47 47
KKGPAPKMLGN C5IUM7_ANAPL 47 47
KKGPAPKMLGN D1MDC5_CAIMO 47 47
KKGPAPKMLGN Q4SHF7_TETNG 80 80
KKGPAPKMLGH B6ZGS7_HUMAN 74 74
KKGPAPKMLGH Q6IBU6_HUMAN 74 74
KKGPAPKMLGH Q68CY8_HUMAN 74 74
KKGPAPKMLGH NR1H2_HUMAN 74 74
KKGPAPKMLGN B8Y3M0_SALSA 102 102
KKGPAPKMLGN B8Y3M1_ONCMY 102 102
KKGPAPKMLGD NR1H2_BOVIN 69 69
KKGPAPKMLGD Q5BIN1_BOVIN 69 69
KKGPAPKMLGD Q58D83_BOVIN 66 66
KKGPAPKMLGN C4PE87_CYPCA 49 49
KKGPAPKMLGN C5IU94_CTEID 49 49
KKGPAPKMLGN Q56A56_DANRE 52 52
KKGPAPKMLGH NR1H2_MOUSE 65 65
KKGPAPKMLGH Q8BP65_MOUSE 62 62
KKGPAPKMLGH NR1H2_RAT 65 65
KKGPAPKMLGN Q0IHW4_XENTR 76 76
KKGPAPKMLGN Q6GMA2_XENLA 76 76
KKGPAPKMLGD Q58CP4_BOVIN 69 69
LIVERXRECPTR2 Length of motif = 15 Motif number = 2
Liver X receptor motif II - 2
PCODE ST INT
VCHSGGHCPMDTYMR A2AGR4_MOUSE 131 37
VCHSGGHCPMDTYMR Q91X41_MOUSE 131 37
VCHSGGHCPMDTYMR Q4TU03_PIG 133 37
VCHSGGHCPMDTYMR NR1H3_MOUSE 131 37
VCHSGGHCPMDTYMR NR1H3_BOVIN 133 37
VCHSGGHCPMDTYMR A5A4X4_PIG 133 37
VCHSGGHCPMDTYMR A4UVT2_PIG 133 37
ICHSGGHCPMDTYMR B2R8B9_HUMAN 133 37
ICHSGGHCPMDTYMR Q8IW13_HUMAN 88 37
ICHSGGHCPMDTYMR Q5U0N9_HUMAN 133 37
ICHSGGHCPMDTYMR NR1H3_HUMAN 133 37
ICHSGGHCPMDTYMR B5MBY7_HUMAN 88 37
ICHSGGHCPMDTYMR B4DXU5_HUMAN 139 37
VCHSGGHCPMDTYMR B6ZGS8_HUMAN 133 37
ICHSGGHCPMDTYMR NR1H3_RAT 131 37
ICHSGGHCPMDTYMR Q5I035_RAT 131 37
ICHSGGHCPMDTYMR B3KV37_HUMAN 133 37
VCKNGGKCEMDMYMR Q8AXU8_CHICK 95 37
VCKNGGKCEMDMYMR Q8JHU1_CHICK 95 37
VCKNGGKCEMDMYMR C5IUM7_ANAPL 95 37
VCKNGGKCEMDMYMR D1MDC5_CAIMO 95 37
SCKNNGHCEMDMYMR Q4SHF7_TETNG 128 37
ACRGGGTCQMDAFMR B6ZGS7_HUMAN 124 39
ACRGGGTCQMDAFMR Q6IBU6_HUMAN 124 39
ACRGGGTCQMDAFMR Q68CY8_HUMAN 124 39
ACRGGGTCQMDAFMR NR1H2_HUMAN 124 39
SCKNNGRCEMDMYMR B8Y3M0_SALSA 150 37
SCKNNGRCEMDMYMR B8Y3M1_ONCMY 150 37
ACRGGGTCQMDAFMR NR1H2_BOVIN 119 39
ACRGGGTCQMDAFMR Q5BIN1_BOVIN 119 39
ACRGGGTCQMDAFMR Q58D83_BOVIN 116 39
TCKNSGRCEMDMYMR C4PE87_CYPCA 97 37
TCKNSGRCEMDMYMR C5IU94_CTEID 97 37
SCKNSGRCEMDMYMR Q56A56_DANRE 100 37
ACRGSGTCQMDAFMR NR1H2_MOUSE 115 39
ACRGSGTCQMDAFMR Q8BP65_MOUSE 112 39
ACRGSGTCQMDAFMR NR1H2_RAT 115 39
TCKNNGKCQMDMYMR Q0IHW4_XENTR 124 37
SCKNNGKCQMDMYMR Q6GMA2_XENLA 124 37
ACRGGGTCQMDAFMR Q58CP4_BOVIN 119 39
LIVERXRECPTR3 Length of motif = 16 Motif number = 3
Liver X receptor motif III - 2
PCODE ST INT
TFLKDFSYNREDFAKA A2AGR4_MOUSE 252 106
TFLKDFSYNREDFAKA Q91X41_MOUSE 312 166
TFLKDFSYNREDFAKA Q4TU03_PIG 314 166
TFLKDFSYNREDFAKA NR1H3_MOUSE 312 166
TFLKDFSYNREDFAKA NR1H3_BOVIN 314 166
TFLKDFSYNREDFAKA A5A4X4_PIG 314 166
TFLKDFSYNREDFAKA A4UVT2_PIG 314 166
TFLKDFSYNREDFAKA B2R8B9_HUMAN 314 166
TFLKDFSYNREDFAKA Q8IW13_HUMAN 269 166
TFLKDFSYNREDFAKA Q5U0N9_HUMAN 314 166
TFLKDFSYNREDFAKA NR1H3_HUMAN 314 166
TFLKDFSYNREDFAKA B5MBY7_HUMAN 209 106
TFLKDFSYNREDFAKA B4DXU5_HUMAN 320 166
TFLKDFSYNREDFAKA B6ZGS8_HUMAN 314 166
TFLKDFSYNREDFAKA NR1H3_RAT 312 166
TFLKDFSYNREDFAKA Q5I035_RAT 312 166
TFLKDFSYNREDFAKA B3KV37_HUMAN 314 166
TFLKDLSYNRDDFAKA Q8AXU8_CHICK 276 166
TFLKDLSYNRDDFAKA Q8JHU1_CHICK 276 166
TFLKDLSYNRDDFAKA C5IUM7_ANAPL 276 166
TFLKDLSYNRDDFAKA D1MDC5_CAIMO 276 166
TFLKDFSYNKEDFAKA Q4SHF7_TETNG 376 233
TFLKDFTYSKDDFHRA B6ZGS7_HUMAN 328 189
TFLKDFTYSKDDFHRA Q6IBU6_HUMAN 328 189
TFLKDFTYSKDDFHRA Q68CY8_HUMAN 328 189
TFLKDFTYSKDDFHRA NR1H2_HUMAN 328 189
TFLKDFSYNKEDFAKA B8Y3M0_SALSA 329 164
TFLKDFSYNKEDFAKA B8Y3M1_ONCMY 329 164
TFLKDFTYSKDDFHRA NR1H2_BOVIN 322 188
TFLKDFTYSKDDFHRA Q5BIN1_BOVIN 322 188
TFLKDFTYSKDDFHRA Q58D83_BOVIN 319 188
TFLKDFSYNKEDFAKA C4PE87_CYPCA 276 164
TFLKDFSYNKEDFAKA C5IU94_CTEID 276 164
TFLKDFTYNKEDFAKA Q56A56_DANRE 279 164
TFLKDFTYSKDDFHRA NR1H2_MOUSE 313 183
TFLKDFTYSKDDFHRA Q8BP65_MOUSE 310 183
TFLKDFTYSKDDFHRA NR1H2_RAT 313 183
TFLKDFTYSKDDFHRA Q0IHW4_XENTR 308 169
TFLKDFTYSKDDFHRA Q6GMA2_XENLA 308 169
TFLKDFTYSKDDFHRA Q58CP4_BOVIN 322 188
LIVERXRECPTR4 Length of motif = 14 Motif number = 4
Liver X receptor motif IV - 2
PCODE ST INT
EFSRAMNELQLNDA A2AGR4_MOUSE 279 11
EFSRAMNELQLNDA Q91X41_MOUSE 339 11
EFSRAMNELQLNDA Q4TU03_PIG 341 11
EFSRAMNELQLNDA NR1H3_MOUSE 339 11
EFSRAMNELQLNDA NR1H3_BOVIN 341 11
EFSRAMNELQLNDA A5A4X4_PIG 341 11
EFSRAMNELQLNDA A4UVT2_PIG 341 11
EFSRAMNELQLNDA B2R8B9_HUMAN 341 11
EFSRAMNELQLNDA Q8IW13_HUMAN 296 11
EFSRAMNELQLNDA Q5U0N9_HUMAN 341 11
EFSRAMNELQLNDA NR1H3_HUMAN 341 11
EFSRAMNELQLNDA B5MBY7_HUMAN 236 11
EFSRAMNELQLNDA B4DXU5_HUMAN 347 11
EFSRAMNELQLNDA B6ZGS8_HUMAN 341 11
EFSRSMNELQLNDA NR1H3_RAT 339 11
EFSRSMNELQLNDA Q5I035_RAT 339 11
EFSRAMNELQLNDA B3KV37_HUMAN 341 11
EFSKGMNELQLNDA Q8AXU8_CHICK 303 11
EFSKGMNELQLNDA Q8JHU1_CHICK 303 11
EFSKGMNELQLNDA C5IUM7_ANAPL 303 11
EFSKGMNELQLNDA D1MDC5_CAIMO 303 11
EFSKGMNDLHLDEA Q4SHF7_TETNG 403 11
EFSRAMRRLGLDDA B6ZGS7_HUMAN 355 11
EFSRAMRRLGLDDA Q6IBU6_HUMAN 355 11
EFSRAMRRLGLDDA Q68CY8_HUMAN 355 11
EFSRAMRRLGLDDA NR1H2_HUMAN 355 11
EFSKGMNDLHLDEA B8Y3M0_SALSA 356 11
EFSKGMNDLHLDEA B8Y3M1_ONCMY 356 11
EFSRAMRRLGLDDA NR1H2_BOVIN 349 11
EFSRAMRRLGLDDA Q5BIN1_BOVIN 349 11
EFSRAMRRLGLDDA Q58D83_BOVIN 346 11
EFSKGMNDLHLDEA C4PE87_CYPCA 303 11
EFSKGMNDLHLDEA C5IU94_CTEID 303 11
EFSKGMNDLHLDEA Q56A56_DANRE 306 11
EFSRAMRRLGLDDA NR1H2_MOUSE 340 11
EFSRAMRRLGLDDA Q8BP65_MOUSE 337 11
EFSRAMRRLGLDDA NR1H2_RAT 340 11
EFSRGMRQMQLDDA Q0IHW4_XENTR 335 11
EFSRGMRQMQLDDA Q6GMA2_XENLA 335 11
EFSRAMRRLGLDDA Q58CP4_BOVIN 349 11
LIVERXRECPTR5 Length of motif = 18 Motif number = 5
Liver X receptor motif V - 2
PCODE ST INT
TLSSVHSEQVFALRLQDK A2AGR4_MOUSE 354 61
TLSSVHSEQVFALRLQDK Q91X41_MOUSE 414 61
TLSSVHSEQVFALRLQDK Q4TU03_PIG 416 61
TLSSVHSEQVFALRLQDK NR1H3_MOUSE 414 61
TLSSVHSEQVFALRLQDK NR1H3_BOVIN 416 61
TLSSVHSEQVFALRLQDK A5A4X4_PIG 416 61
TLSSVHSEQVFALRLQDK A4UVT2_PIG 416 61
TLSSVHSEQVFALRLQDK B2R8B9_HUMAN 416 61
TLSSVHSEQVFALRLQDK Q8IW13_HUMAN 371 61
TLSSVHSEQVFALRLQDK Q5U0N9_HUMAN 416 61
TLSSVHSEQVFALRLQDK NR1H3_HUMAN 416 61
TLSSVHSEQVFALRLQDK B5MBY7_HUMAN 311 61
TLSSVHSEQVFALRLQDK B4DXU5_HUMAN 422 61
TLSSVHSEQVSALRLQDK B6ZGS8_HUMAN 416 61
TLSSVHSEQVFALRLQDK NR1H3_RAT 414 61
TLSSVHSEQVFALRLQDK Q5I035_RAT 414 61
TLSSVHSEQVFALRLQDK B3KV37_HUMAN 416 61
TLSSVHSEQVFALRLQDK Q8AXU8_CHICK 378 61
TLSSVHSEQVFALRLQDK Q8JHU1_CHICK 378 61
TLSNVHSEQVFALRLQDK C5IUM7_ANAPL 378 61
TLSNVHSEQVFALRLQDK D1MDC5_CAIMO 378 61
TLSSVHSEQVFALRLQDK Q4SHF7_TETNG 478 61
TLSSVHSEQVFALRLQDK B6ZGS7_HUMAN 430 61
TLSSVHSEQVFALRLQDK Q6IBU6_HUMAN 430 61
TLSSVHSEQVFALRLQDK Q68CY8_HUMAN 429 60
TLSSVHSEQVFALRLQDK NR1H2_HUMAN 430 61
TLSSVHSEQVFALRLQDK B8Y3M0_SALSA 431 61
TLSSVHSEQVFALRLQDK B8Y3M1_ONCMY 431 61
TLSSVHSEQVFALRLQDK NR1H2_BOVIN 424 61
TLSSVHSEQVFALRLQDK Q5BIN1_BOVIN 424 61
TLSSVHSEQVFALRLQDK Q58D83_BOVIN 421 61
TLSSVHSEQVFALRLQDK C4PE87_CYPCA 378 61
TLSSVHSEQVFALRLQDK C5IU94_CTEID 378 61
TLSSVHSEQVFALRLQDK Q56A56_DANRE 381 61
TLSSVHSEQVFALRLQDK NR1H2_MOUSE 415 61
TLSSVHSEQVFALRLQDK Q8BP65_MOUSE 412 61
TLSSVHSEQVFALRLQDK NR1H2_RAT 415 61
TLSSVHSEQVFALRLQDK Q0IHW4_XENTR 410 61
TLSSVHSEQFFALRLQDK Q6GMA2_XENLA 410 61
TLSSVHSEQSSPCGSRTR Q58CP4_BOVIN 424 61
User query: Display/Full Code "LIVERXRECPTR"