WORKLIST ENTRIES (1):
LDLRECEPTOR View alignment View Structure Low density lipoprotein (LDL) receptor signature
Type of fingerprint: COMPOUND with 6 elements
Links:
INTERPRO; IPR002172
PROSITE; PS01209 LDLRA_1; PS50068 LDLRA_2
PFAM; PF00057 ldl_recept_a; PF00058 ldl_recept_b
Creation date 14-SEP-1993; UPDATE 15-OCT-1999
1. RUSSELL, D.W., SCHNEIDER, W.J., YAMAMOTO, T., LUSKEY, K.L., BROWN, M.S.
AND GOLDSTEIN, J.L.
Domain map of the LDL receptor - Sequence homology with the epidermal
growth factor precursor.
CELL 37(2) 577-585 (1984).
2. YAMAMOTO, T., DAVIS, C.G., BROWN, M.S., SCHNEIDER, W.J. CASEY, M.L.,
GOLDSTEIN, J.L. AND RUSSELL, D.W.
The human LDL receptor - A cysteine-rich protein with multiple ALU
sequences in its messenger-RNA.
CELL 39(1) 27-38 (1984).
Low density lipoprotein (LDL) is the major cholesterol-carrying lipoprotein
of plasma. The receptor protein binds LDL and transports it into cells by
endocytosis. In order to be internalised, the receptor-ligand complex must
first cluster into clathrin-coated pits. The N-terminal region of the
extracellular domain contains 7 or 8 40-residue repeats, each of which
contains 6 cysteine residues, which are involved in disulphide bond
formation. Following these repeats is a 350 residue domain that resembles
part of the epidermal growth factor (EGF) precursor [1,2].
LDLRECEPTOR is a 6-element fingerprint that provides a signature for Cys-
rich LDL repeats. The fingerprint was derived from an initial alignment of
2 sequences: each of the motifs encodes 3 well-conserved Cys residues in a
22 residue motif (i.e., corresponds to about half of the 6-Cys repeat). Two
iterations on OWL21.1 were required to reach convergence, at which point a
true set comprising 14 sequences was identified. Four partial matches were
also found: all are LDL-receptors, neural cell adhesion molecules, and
basement membrane heparan sulphate proteoglycans (perlecans), which are
known to show a high degree of similarity to LDL-receptors.
An update on SPTR37_9f identified a true set of 41 sequences, and 34
partial matches.
An update on SPTR37_9f identified a true set of 41 sequences, and 34
partial matches.
SUMMARY INFORMATION
41 codes involving 6 elements
0 codes involving 5 elements
3 codes involving 4 elements
12 codes involving 3 elements
19 codes involving 2 elements
COMPOSITE FINGERPRINT INDEX
6| 41 41 41 41 41 41
5| 0 0 0 0 0 0
4| 0 0 3 3 3 3
3| 1 1 1 11 11 11
2| 1 2 1 6 13 15
--+-------------------------------
| 1 2 3 4 5 6
True positives..
LRP1_HUMAN Q61291 LRP_CAEEL LRP1_CHICK
LRP2_HUMAN LDVR_CHICK LDVR_RABIT LDVR_HUMAN
LRP2_RAT O77505 LDVR_MOUSE LDVR_RAT
Q92856 Q92673 O46131 Q95209
O42126 LDL1_XENLA O88307 LDLR_CRIGR
LDLR_RAT LDLR_HUMAN Q22453 LDLR_MOUSE
Q90883 Q98931 LDL2_XENLA Q14114
O76952 P79708 O77244 O01768
Q09967 YL_DROME Q21629 O01552
O18260 GPCR_LYMST O75074 O88204
NDL_DROME
Subfamily: Codes involving 4 elements
Subfamily True positives..
Q99876 PGBM_MOUSE PGBM_HUMAN
Subfamily: Codes involving 3 elements
Subfamily True positives..
O14968 O18261 O18263 UN52_CAEEL
O88883 O75197 O75581 O88572
Q21340 Q22179 Q17496 AEGP_RAT
Subfamily: Codes involving 2 elements
Subfamily True positives..
Q19970 O62147 ENTK_BOVIN ENTK_HUMAN
Q03711 ENTK_PIG O44191 Q17797
CFAI_HUMAN ENTK_MOUSE Q21948 Q21496
Q93473
PROTEIN TITLES
LRP1_HUMAN LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 1 PRECURSOR
Q61291 LOW DENSITY LIPOPROTEIN RECEPTOR RELATED PROTEIN (AM2 RECEPT
LRP_CAEEL LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN PRECURSOR (
LRP1_CHICK LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 1 PRECURSOR
LRP2_HUMAN LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2 PRECURSOR
LDVR_CHICK VERY LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR (VLDL RECEPT
LDVR_RABIT VERY LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR (VLDL RECEPT
LDVR_HUMAN VERY LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR (VLDL RECEPT
LRP2_RAT LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2 PRECURSOR
O77505 VERY LOW DENSITY LIPOPROTEIN RECEPTOR VLDL-R2.
LDVR_MOUSE VERY LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR (VLDL RECEPT
LDVR_RAT VERY LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR (VLDL RECEPT
Q92856 GP250 PRECURSOR.
Q92673 LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN LR11 PRECUR
O46131 LIPOPHORIN RECEPTOR PRECURSOR.
Q95209 LR11.
O42126 VITELLOGENIN RECEPTOR.
LDL1_XENLA LOW-DENSITY LIPOPROTEIN RECEPTOR 1 PRECURSOR (LDL RECEPTOR 1
O88307 LR11.
LDLR_CRIGR LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR (LDL RECEPTOR).
LDLR_RAT LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR (LDL RECEPTOR).
LDLR_HUMAN LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR (LDL RECEPTOR).
Q22453 SIMILARTO LDL RECEPTOR-RELATED PROTEIN. NCBI GI: 1055166.
LDLR_MOUSE LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR (LDL RECEPTOR).
Q90883 LDL RECEPTOR HOMOLOGUE LR8B PROTEIN.
Q98931 LDL RECEPTOR HOMOLOGUE LR8B PROTEIN.
LDL2_XENLA LOW-DENSITY LIPOPROTEIN RECEPTOR 2 PRECURSOR (LDL RECEPTOR 2
Q14114 APOLIPOPROTEIN E RECEPTOR 2 PRECURSOR.
O76952 PUTATIVE VITELLOGENIN RECEPTOR.
P79708 LOW-DENSITY LIPOPROTEIN RECEPTOR.
O77244 HEAD-ACTIVATOR BINDING PROTEIN PRECURSOR.
O01768 SIMILARITY TO EGF-LIKE DOMAINS.
Q09967 HYPOTHETICAL 62.2 KD PROTEIN B0244.8 IN CHROMOSOME III.
YL_DROME PUTATIVE VITELLOGENIN RECEPTOR PRECURSOR (YL).
Q21629 SIMILAR TO CYSTEINE-RICH REPEAT REGIONS OF LDL RECEPTORS AND
O01552 HYPOTHETICAL 294.4 KD PROTEIN.
O18260 ZC101.1 PROTEIN.
GPCR_LYMST G protein COUPLED RECEPTOR GRL101 PRECURSOR.
O75074 LDL RECEPTOR RELATED PROTEIN 105.
O88204 LRP105.
NDL_DROME SERINE PROTEASE NUDEL PRECURSOR (EC 3.4.21.-).
Q99876 APOLIPOPROTEIN E RECEPTOR 2 906.
PGBM_MOUSE BASEMENT MEMBRANE-SPECIFIC HEPARAN SULFATE PROTEOGLYCAN CORE
PGBM_HUMAN BASEMENT MEMBRANE-SPECIFIC HEPARAN SULFATE PROTEOGLYCAN CORE
O14968 APOER2DELTA4-7.
O18261 UNC-52 PROTEIN.
O18263 UNC-52 PROTEIN.
UN52_CAEEL BASEMENT MEMBRANE PROTEOGLYCAN PRECURSOR (PERLECAN HOMOLOG).
O88883 LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 5.
O75197 LIPOPROTEIN RECEPTOR RELATED PROTEIN 5.
O75581 LDL RECEPTOR-RELATED PROTEIN 6.
O88572 LDL RECEPTOR-RELATED PROTEIN 6.
Q21340 K08E5.3 PROTEIN.
Q22179 LRX-1 PROTEIN.
Q17496 B0393.7 PROTEIN.
AEGP_RAT APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Q19970 SIMILAR TO LDL-RECEPTOR LIGAND-BINDING REPEAT. NCBI GI: 1118
O62147 F09B12.5 PROTEIN.
ENTK_BOVIN ENTEROPEPTIDASE PRECURSOR (EC 3.4.21.9) (ENTEROKINASE).
ENTK_HUMAN ENTEROPEPTIDASE PRECURSOR (EC 3.4.21.9) (ENTEROKINASE).
Q03711 COMPLEMENT FACTOR I PRECURSOR (EC 3.4.21.45) (C3B/C4B INACTI
ENTK_PIG ENTEROPEPTIDASE PRECURSOR (EC 3.4.21.9) (ENTEROKINASE).
O44191 T11F8.3 PROTEIN.
Q17797 SIMILARITY TO LOW-DENSITY LIPOPROTEIN.
CFAI_HUMAN COMPLEMENT FACTOR I PRECURSOR (EC 3.4.21.45) (C3B/C4B INACTI
ENTK_MOUSE ENTEROPEPTIDASE (EC 3.4.21.9) (ENTEROKINASE).
Q21948 SIMILAR TO LDL-RECEPTOR-RELATED PROTEINS.
Q21496 SIMILARITY TO LDL-RECEPTOR CLASS A DOMAIN.
Q93473 F14B4.1 PROTEIN.
SCAN HISTORY
OWL21_1 2 250 NSINGLE
OWL25_2 1 300 NSINGLE
SPTR37_9f 5 700 NSINGLE
SPTR37_9f 5 700 NSINGLE
INITIAL MOTIF SETS
LDLRECEPTOR1 Length of motif = 22 Motif number = 1
LDL receptor Cys-rich motif I - 1
PCODE ST INT
GKCISYKWVCDGSAECQDGSDE LDLR_HUMAN 36 36
GKCIPYKWICDGSAECKDSSDE A40388 36 36
LDLRECEPTOR2 Length of motif = 22 Motif number = 2
LDL receptor Cys-rich motif II - 1
PCODE ST INT
NRCIPQFWRCDGQVDCDNGSDE LDLR_HUMAN 79 21
NRCIPMSWKCDGQTDCENGSDE A40388 79 21
LDLRECEPTOR3 Length of motif = 22 Motif number = 3
LDL receptor Cys-rich motif III - 1
PCODE ST INT
GKCISRQFVCDSDRDCLDGSDE LDLR_HUMAN 118 17
GKCISLDFVCDEDLDCDDGSDE A40388 118 17
LDLRECEPTOR4 Length of motif = 22 Motif number = 4
LDL receptor Cys-rich motif IV - 1
PCODE ST INT
GECIHSSWRCDGGPDCKDKSDE LDLR_HUMAN 206 66
GECIHMSWKCDGGFDCKDKSDE A40388 204 64
LDLRECEPTOR5 Length of motif = 22 Motif number = 5
LDL receptor Cys-rich motif V - 1
PCODE ST INT
GNCIHGSRQCDREYDCKDMSDE LDLR_HUMAN 245 17
GTCIHGSRQCDREYDCKDLSDE A40388 243 17
LDLRECEPTOR6 Length of motif = 22 Motif number = 6
LDL receptor Cys-rich motif VI - 1
PCODE ST INT
GECITLDKVCNMARDCRDWSDE LDLR_HUMAN 286 19
GECITMDKVCNKKRDCRDWSDE A40388 284 19
FINAL MOTIF SETS
LDLRECEPTOR1 Length of motif = 22 Motif number = 1
LDL receptor Cys-rich motif I - 5
PCODE ST INT
KRCIPRVWVCDRDNDCVDGSDE LRP1_HUMAN 3464 3464
GRCIPISWTCDLDDDCGDRSDE Q61291 947 947
KKCIPAQYGCDGDNDCGDYSDE LRP_CAEEL 1112 1112
GRCIPISWTCDLDDDCGDRSDE LRP1_CHICK 944 944
NICIPRVYLCDGDNDCGDNSDE LRP2_HUMAN 2833 2833
GRCIPLLWKCDGDEDCSDGSDE LDVR_CHICK 61 61
GRCITQLWKCDGDEDCVDGSDE LDVR_RABIT 43 43
GRCITLLWKCDGDEDCVDGSDE LDVR_HUMAN 43 43
NICVPRAFLCDGDNDCGDGSDE LRP2_RAT 2834 2834
GRCITLLWKCDGDEDCTDGSDE O77505 43 43
GRCITLLWKCDGDEDCADGSDE LDVR_MOUSE 43 43
GRCITLLWKCDGDEDCTDGSDE LDVR_RAT 43 43
GMCIRSSWVCDGDNDCRDWSDE Q92856 1168 1168
GMCIRSSWVCDGDNDCRDWSDE Q92673 1168 1168
GHCIPLTWMCEGEDDCGDNSDE O46131 58 58
GMCIRSSWVCDGDNDCRDWSDE Q95209 1167 1167
GRCITSLWKCDGDEDCSDGSDE O42126 42 42
GKCIPYKWICDGSAECKDSSDE LDL1_XENLA 37 37
GMCIRSSWVCDGDNDCRDWSDE O88307 1168 1168
GKCIASKWVCDGSPECPDGSDE LDLR_CRIGR 37 37
GKCIVSKWVCDGSRECPDGSDE LDLR_RAT 37 37
GKCISYKWVCDGSAECQDGSDE LDLR_HUMAN 37 37
GRCIPMSWRCDGDIDCQNEEDE Q22453 537 537
GKCIASKWVCDGSPECPDGSDE LDLR_MOUSE 37 37
ERCIPAVWACDEDNDCSDNSDE Q90883 39 39
ERCIPAVWACDEDNDCSDNSDE Q98931 39 39
GKCIPYKWICDGSAECKDGSDE LDL2_XENLA 37 37
ERCIPSVWRCDEDDDCLDHSDE Q14114 57 57
SKCIDQTRRCDEHVDCGDGSDE O76952 1009 1009
GKCIPYKWLCDGQSECDDGSDE P79708 37 37
GDCIPLTWKCDMDTDCNDSSDE O77244 1070 1070
SQCIHPSWKCDGTNDCYDGSDE O01768 108 108
NACLPLSAKCDGINDCADASDE Q09967 250 250
EQCVDKERRCDNRKDCHDHSDE YL_DROME 1085 1085
DACLPISVKCDGVSDCENESDE Q21629 227 227
KKCVPKSNLCDGDDDCGDGSDE O01552 937 937
GHCLPVAQFCDRRVQCPDGDDE O18260 300 300
LQCVLMGSKCDGVSDCENGMDE GPCR_LYMST 51 51
GKCLPGPWQCNTVDECGDGSDE O75074 176 176
GKCLPGPWQCNMVDECGDGSDE O88204 176 176
ADRVDEERLCDGYEDCPMGEDE NDL_DROME 930 930
LDLRECEPTOR2 Length of motif = 22 Motif number = 2
LDL receptor Cys-rich motif II - 5
PCODE ST INT
GRCIPARWKCDGEDDCGDGSDE LRP1_HUMAN 3505 19
GRCININWRCDNDNDCGDNSDE Q61291 988 19
HRCIPEQWKCDSDNDCGDGSDE LRP_CAEEL 1156 22
GRCININWRCDNDNDCGDNSDE LRP1_CHICK 985 19
GRCIPQHWYCDQETDCFDASDE LRP2_HUMAN 2874 19
GQCVPNRWQCDGDPDCEDGSDE LDVR_CHICK 100 17
GQCIPNRWQCDGDPDCEDGSDE LDVR_RABIT 82 17
GQCVPSRWKCDGDPDCEDGSDE LDVR_HUMAN 82 17
QRCIPSYWFCDGEADCADGSDE LRP2_RAT 2876 20
GQCVPNRWQCDGDPDCEDGSDE O77505 82 17
GQCVPNRWQCDGDPDCEDGSDE LDVR_MOUSE 82 17
GQCVPNRWQCDGDPDCEDGSDE LDVR_RAT 82 17
GHCIPQRWACDGDTDCQDGSDE Q92856 1209 19
GHCIPQRWACDGDTDCQDGSDE Q92673 1209 19
GRCIPSHWQCDNEKDCADGSDE O46131 100 20
GHCIPQRWACDGDADCQDGSDE Q95209 1208 19
GQCVPSRWECDGDPDCEDGSDE O42126 81 17
NRCIPMSWKCDGQTDCENGSDE LDL1_XENLA 80 21
GHCIPQRWACDGDADCQDGSDE O88307 1209 19
SRCIPNSWRCDGQTDCENGSDE LDLR_CRIGR 80 21
SRCIPDSWRCDGRTDCENGSDE LDLR_RAT 80 21
NRCIPQFWRCDGQVDCDNGSDE LDLR_HUMAN 80 21
FKCIPNKWVCDGEFDCEDKSDE Q22453 585 26
SRCIPDSWRCDGQVDCENDSDE LDLR_MOUSE 80 21
GHCIPDRWKCDGEEECSDGSDE Q90883 78 17
GHCIPDRWKCDGEEECSDGSDE Q98931 78 17
NRCIPMSWKCDGQTDCENGSDE LDL2_XENLA 80 21
GHCIHERWKCDGEEECPDGSDE Q14114 96 17
GMCIDVNTLCDGFPDCLDGSDE O76952 1052 21
NKCIPTSWHCDSQKDCENGSDE P79708 80 21
RCLPSLSWHCDGENDCGDGSDE O77244 1112 20
RTCMPKHWQCDGQPDCADGSDE O01768 161 31
KQCIKASHVCDGVAQCADGSDE Q09967 286 14
GKCVDSSLVCDGTNDCGDNSDE YL_DROME 1128 21
KNCIKASKVCDGIPDCDDGSDE Q21629 263 14
TTCLPMEFICDGKSDCYDGTDE O01552 979 20
NVCVPTVVVCDGWKDCHDGSDE O18260 340 18
TTCIDKILRCDRNDDCSNGLDE GPCR_LYMST 89 16
TRCLPVERRCDGLQDCGDGSDE O75074 225 27
TRCLPVERRCDGTQDCGDGSDE O88204 225 27
SMCYSRLERCDGFMNCLNGRDE NDL_DROME 980 28
LDLRECEPTOR3 Length of motif = 22 Motif number = 3
LDL receptor Cys-rich motif III - 5
PCODE ST INT
NRCVPGRWQCDYDNDCGDNSDE LRP1_HUMAN 3546 19
GRCIPEHWTCDGDNDCGDYSDE Q61291 1026 16
GRCIPIYWLCDGDNDCYDGTDE LRP_CAEEL 1197 19
GRCIPVHWTCDGDNDCGDYSDE LRP1_CHICK 1023 16
GRCIPSEWICDGDNDCGDMSDE LRP2_HUMAN 2916 20
TQCIPVSWKCDGEKDCDSGEDE LDVR_CHICK 143 21
TQCIPVSWRCDGESDCDSGEDE LDVR_RABIT 125 21
TQCIPVSWRCDGENDCDSGEDE LDVR_HUMAN 125 21
GRCISGNWVCDGDNDCGDMSDE LRP2_RAT 2918 20
TQCIPVSWRCDGENDCYSGEDE O77505 125 21
TQCIPVSWRCDGENDCDNGEDE LDVR_MOUSE 125 21
TQCIPESWRCDGENDCDNGEDE LDVR_RAT 125 21
GTCIPSSKHCDGLRDCSDGSDE Q92856 1247 16
GTCIPSSKHCDGLRDCSDGSDE Q92673 1247 16
GECVPLAWMCDDNPDCSDGSDE O46131 143 21
GTCIPSTKHCDGLHDCSDGSDE Q95209 1246 16
TQCIPLSWKCDGERDCANAEDE O42126 124 21
GKCISLDFVCDEDLDCDDGSDE LDL1_XENLA 119 17
GTCIPSSKHCDGLRDCPDGSDD O88307 1247 16
GKCISQKFVCDQDQDCVDGSDE LDLR_CRIGR 119 17
GKCISRQFVCDQDWDCLDGSDE LDLR_RAT 119 17
GKCISRQFVCDSDRDCLDGSDE LDLR_HUMAN 119 17
SLCIPETWVCDGQRDCTNGKDE Q22453 629 22
GKCISPQFVCDGDRDCLDGSDE LDLR_MOUSE 119 17
NKCIPSSWRCDGQKDCESGIDE Q90883 121 21
NKCIPSSWRCDGQKDCESGIDE Q98931 121 21
GKCISLDFVCDQDQDCDDGSDE LDL2_XENLA 119 17
HKCVPASWRCDGEKDCEGGADE Q14114 139 21
GQCIPKWWECDGNPDCTDGSDE O76952 1099 25
GNCISLKFVCDDDRDCADGSDE P79708 119 17
NRCISKSWLCDGDNDCSDGFDE O77244 1150 16
KKCIPLEQKCDGRRDCPDGEDE O01768 201 18
GTCIMRTQVCDGKKDCTDGMDE Q09967 326 18
GSCIAGSWECDGRIDCSDGSDE YL_DROME 1168 18
GTCIMRSQVCDGKHDCLDGIDE Q21629 303 18
TKCIIKSKRCNGVQECDNGADE O01552 1023 22
GQCIEESLKCNRKYDCADGSDE O18260 441 79
HFCVPRDKQCDFLDDCGDNSDE GPCR_LYMST 129 18
GYCLPWEQPCGSSSDSDGGSLG O75074 366 119
GYCLPWEQPCGSSSEGDDGSTG O88204 366 119
KRCISKRQRCDRNVDCLGGEDE NDL_DROME 1406 404
LDLRECEPTOR4 Length of motif = 22 Motif number = 4
LDL receptor Cys-rich motif IV - 5
PCODE ST INT
GRCIAGRWKCDGDHDCADGSDE LRP1_HUMAN 3585 17
GLCIPLRWRCDGDTDCMDSSDE Q61291 1074 26
RQCVPLRNHCDGQSDCEDGSDE LRP_CAEEL 1239 20
GLCIPMRWRCDGDTDCMDSSDE LRP1_CHICK 1071 26
RRCIPQSWVCDGDVDCTDGYDE LRP2_HUMAN 2963 25
GQCISKSFVCNGQDDCSDGSDE LDVR_CHICK 182 17
GRCISRNFVCNGQDDCSDGSDE LDVR_RABIT 164 17
GRCISRNFVCNGQDDCSDGSDE LDVR_HUMAN 164 17
RRCIPQYWVCDGDADCSDALDE LRP2_RAT 2965 25
GRCISRNFMCNGQDDCSDGSDE O77505 164 17
GRCVSRNFVCNGQDDCDDGSDE LDVR_MOUSE 164 17
GRCVSRNFVCNGQDDCDDGSDE LDVR_RAT 164 17
QQCLFHSMVCDGIIQCRDGSDE Q92856 1287 18
QQCLFHSMVCDGIIQCRDGSDE Q92673 1287 18
SKCIQQRWVCDRDDDCGDGSDE O46131 181 16
QQCLFHSMVCDGIIQCRDGSDE Q95209 1286 18
GRCISSTFVCNGQNDCSDGSDE O42126 163 17
GICIPKLWACDGDPDCEDGSDE LDL1_XENLA 159 18
QQCLFHSMVCDGIVQCRDGSDE O88307 1287 18
WPCIPSLWACDGDDDCEDGSDE LDLR_CRIGR 158 17
SSCIPSLWACDGDRDCDDGSDE LDLR_RAT 158 17
STCIPQLWACDNDPDCEDGSDE LDLR_HUMAN 158 17
GNCIFKNWVCDGEEDCSDGSDE Q22453 670 19
SICIPSLWACDGDVDCVDGSHE LDLR_MOUSE 158 17
KTCISINFVCDGYNNCGDGSDE Q90883 159 16
KTCISINFVCDGYNNCGDGSDE Q98931 159 16
GICIPKLWACDGDRDCEDGSDE LDL2_XENLA 159 18
RSCLAAVFVCDGDDDCGDGSDE Q14114 177 16
GHCIEDRLLCDGNNDCGDNSDE O76952 1140 19
KLCIPQLWACDDDPDCPDESDE P79708 159 18
NNCIASFFKCNGLDDCGDNSDE O77244 1204 32
HRCIPMAWRCDGTDDCMDNAKS O01768 243 20
KMCISRRKVCDGTPDCDDGADE Q09967 412 64
GQCLDRSLVCDGHNDCGDKSDE YL_DROME 1208 18
NKCIKRSKVCDGIFDCEDGADE Q21629 387 62
GLCIKQSQVCDGKMQCLDGLDE O01552 1063 18
TRCFHYDRLCDGTDDCGDGSDE O18260 526 63
SQCVAFGNLCDGLVDCVDGSDE GPCR_LYMST 168 17
QGCFSEPQRCDGWWHCASGRDE O75074 389 1
QGCFSEPQRCDGWWHCASGRDE O88204 389 1
SQIVDIMMRCDRKVDCEDGTDE NDL_DROME 1719 291
LDLRECEPTOR5 Length of motif = 22 Motif number = 5
LDL receptor Cys-rich motif V - 5
PCODE ST INT
GHCIPLRWRCDADADCMDGSDE LRP1_HUMAN 3623 16
ARCISKAWVCDGDSDCEDNSDE Q61291 1117 21
GLCIPASWKCDGQQDCDDGSDE LRP_CAEEL 1281 20
ARCISKAWVCDGDSDCEDNSDE LRP1_CHICK 1114 21
GLCIPKIFRCDRHNDCGDYSDE LRP2_HUMAN 3003 18
STCIPISWVCDDDADCSDHSDE LDVR_CHICK 221 17
SSCIPISWVCDDDADCSDQSDE LDVR_RABIT 203 17
SSCIPISWVCDDDADCSDQSDE LDVR_HUMAN 203 17
GRCVRQSFRCDRRNDCGDYSDE LRP2_RAT 3005 18
PPCIPISWVCDDDADCSDQSDE O77505 203 17
SSCIPLSWVCDDDADCSDQSDE LDVR_MOUSE 203 17
SSCIPLSWVCDDDADCSDQSDE LDVR_RAT 203 17
GVCISLIWKCDGMDDCGDYSDE Q92856 1335 26
GVCISLIWKCDGMDDCGDYSDE Q92673 1335 26
NMCITARWQCDGDLDCQDGSDE O46131 222 19
GVCISLIWKCDGMDDCGDYSDE Q95209 1334 26
FSCIPLSWVCDDEPDCADHSDE O42126 202 17
GECIHMSWKCDGGFDCKDKSDE LDL1_XENLA 205 24
GVCISLIWKCDGMDDCGDYSDE O88307 1335 26
SECIHRSWVCDGSADCKDKSDE LDLR_CRIGR 208 28
SECIHRSWVCDGAADCKDKSDE LDLR_RAT 208 28
GECIHSSWRCDGGPDCKDKSDE LDLR_HUMAN 207 27
GECIPSRWRCDAEVDCKDHSDE Q22453 717 25
SECIHRSWVCDGEADCKDKSDE LDLR_MOUSE 208 28
SVCIPQLWVCDNQADCEDHSDE Q90883 198 17
SVCIPQLWVCDNQADCEDHSDE Q98931 198 17
GECIHMSWKCDAGYDCKHKSDD LDL2_XENLA 205 24
GACIPERWVCDRQFDCEDRSDE Q14114 219 20
GKCLDIAVRCNGTAECPDGEDE O76952 1188 26
GECIHMKWRCDGGVDCRDQSDE P79708 207 26
KECYQKISKCDGMLDCRDGSDE O77244 1252 26
VACELTAVLCDGIQDCSDGFDE O01768 292 27
HKCLDSSRRCDGVWDCEDKSDE Q09967 454 20
KICLPSAVRCNGTTECPRGEDE YL_DROME 1255 25
NKCLESSRRCDGVWDCEDKSDE Q21629 429 20
STCLDLIFRCDGVADCEDSSDE O01552 1106 21
SRCSSVQFECKRDGKCIDKALE O18260 577 29
GSLIKKEFVCDGWVDCKLTFAD GPCR_LYMST 205 15
GLCYTPADRCNNQKSCPDGADE O75074 428 17
GLCYAPADRCNNQKSCPDGADE O88204 428 17
LKGSLKGLICDGKADCEDLTDE NDL_DROME 1749 8
LDLRECEPTOR6 Length of motif = 22 Motif number = 6
LDL receptor Cys-rich motif VI - 5
PCODE ST INT
TLCKPLAWKCDGEDDCGDNSDE LRP1_HUMAN 3664 19
SVCLPPDKLCDGKDDCGDGSDE Q61291 1158 19
GRCILNNWLCDGENDCGDGSDE LRP_CAEEL 1323 20
SICLPPEKLCDGSDDCGDGSDE LRP1_CHICK 1155 19
GRCISKTFVCDEDNDCGDGSDE LRP2_HUMAN 3042 17
GECIHKKWRCDGDPDCKDGSDE LDVR_CHICK 267 24
GECIHKKWRCDGDPDCKDGSDE LDVR_RABIT 249 24
GECIHKKWRCDGDPDCKDGSDE LDVR_HUMAN 249 24
GRCIPRFFVCDEDNDCGDGSDE LRP2_RAT 3044 17
GECIHKKWRCDGDPDCKDGSDE O77505 249 24
GECIHKKWRCDGDPDCKDGSDE LDVR_MOUSE 249 24
GECIHKKWRCDGDPDCKDGSDE LDVR_RAT 249 24
GHCIPNRWKCDRENDCGDWSDE Q92856 1379 22
GHCIPNRWKCDRENDCGDWSDE Q92673 1379 22
MTCIHQSWVCDGDRDCPDGSDE O46131 266 22
GHCIPNRWKCDRENDCGDWSDE Q95209 1378 22
GECIHKKWRCDGDADCKDKSDE O42126 248 24
GTCIHGSRQCDREYDCKDLSDE LDL1_XENLA 244 17
GHCIPNRWKCDRENDCGDWSDE O88307 1379 22
GTCIHGSRQCDREYDCKDMSDE LDLR_CRIGR 247 17
GSCIHGSRQCDREHDCKDMSDE LDLR_RAT 247 17
GNCIHGSRQCDREYDCKDMSDE LDLR_HUMAN 246 17
HNCINKAFVCDGELDCSDGSDE Q22453 760 21
GSCIHGSRQCDREHDCKDMSDE LDLR_MOUSE 247 17
GECILLNWKCDGDEDCKDKSDE Q90883 244 24
GECILLNWKCDGDEDCKDKSDE Q98931 244 24
GTCIHGSRQCDREYDCKDLSDE LDL2_XENLA 244 17
GECVHLGWRCDGDRDCKDKSDE Q14114 270 29
GKCIRKEWRCDKEVDCDDGSDE O76952 1225 15
GTCIHGSFQCNREFNCHDQSDE P79708 246 17
GECISLKKVCDTRKDCPLGEDE O77244 1295 21
GQCIDSGRLCDASVDCVDGSDE O01768 333 19
KKCLPAFTRCNGVADCSDGSDE Q09967 492 16
RECIRREFRCDGQKDCGDGSDE YL_DROME 1294 17
KKCLPFHTRCNGVAECSDGSDE Q21629 467 16
GKCLRSFQLCDGFPDCLTGEDE O01552 1151 23
GECIDKRRVCDTRPDCLDASDE O18260 777 178
TRCIQKSNVCDGYCDCKTCDDE GPCR_LYMST 243 16
NLCIFETWRCDGQEDCQDGSDE O75074 465 15
NLCIFETWRCDGQEDCQDGSDE O88204 465 15
KTCLPLSKRCDNKVDCKFKEDE NDL_DROME 1787 16
User query: Display/Full Code "LDLRECEPTOR"