WORKLIST ENTRIES (1):

LDLRECEPTOR View alignment View Structure     Low density lipoprotein (LDL) receptor signature
 Type of fingerprint: COMPOUND with 6  elements
Links:
   INTERPRO; IPR002172
   PROSITE; PS01209 LDLRA_1; PS50068 LDLRA_2
   PFAM; PF00057 ldl_recept_a; PF00058 ldl_recept_b

 Creation date 14-SEP-1993; UPDATE 15-OCT-1999

   1. RUSSELL, D.W., SCHNEIDER, W.J., YAMAMOTO, T., LUSKEY, K.L., BROWN, M.S.
   AND GOLDSTEIN, J.L.
   Domain map of the LDL receptor - Sequence homology with the epidermal
   growth factor precursor.
   CELL 37(2) 577-585 (1984).

   2. YAMAMOTO, T., DAVIS, C.G., BROWN, M.S., SCHNEIDER, W.J. CASEY, M.L., 
   GOLDSTEIN, J.L. AND RUSSELL, D.W.
   The human LDL receptor - A cysteine-rich protein with multiple ALU
   sequences in its messenger-RNA.
   CELL 39(1) 27-38 (1984).

   Low density lipoprotein (LDL) is the major cholesterol-carrying lipoprotein
   of plasma. The receptor protein binds LDL and transports it into cells by
   endocytosis. In order to be internalised, the receptor-ligand complex must
   first cluster into clathrin-coated pits. The N-terminal region of the
   extracellular domain contains 7 or 8 40-residue repeats, each of which
   contains 6 cysteine residues, which are involved in disulphide bond 
   formation. Following these repeats is a 350 residue domain that resembles
   part of the epidermal growth factor (EGF) precursor [1,2].
  
   LDLRECEPTOR is a 6-element fingerprint that provides a signature for Cys-
   rich LDL repeats. The fingerprint was derived from an initial alignment of
   2 sequences: each of the motifs encodes 3 well-conserved Cys residues in a
   22 residue motif (i.e., corresponds to about half of the 6-Cys repeat). Two
   iterations on OWL21.1 were required to reach convergence, at which point a
   true set comprising 14 sequences was identified. Four partial matches were
   also found: all are LDL-receptors, neural cell adhesion molecules, and
   basement membrane heparan sulphate proteoglycans (perlecans), which are
   known to show a high degree of similarity to LDL-receptors.
  
   An update on SPTR37_9f identified a true set of 41 sequences, and 34
   partial matches.
  
   An update on SPTR37_9f identified a true set of 41 sequences, and 34
   partial matches.

  SUMMARY INFORMATION
     41 codes involving  6 elements
      0 codes involving  5 elements
      3 codes involving  4 elements
     12 codes involving  3 elements
     19 codes involving  2 elements

   COMPOSITE FINGERPRINT INDEX
  
    6|  41   41   41   41   41   41  
    5|   0    0    0    0    0    0  
    4|   0    0    3    3    3    3  
    3|   1    1    1   11   11   11  
    2|   1    2    1    6   13   15  
   --+-------------------------------
     |   1    2    3    4    5    6  

True positives..
 LRP1_HUMAN     Q61291         LRP_CAEEL      LRP1_CHICK     
 LRP2_HUMAN     LDVR_CHICK     LDVR_RABIT     LDVR_HUMAN     
 LRP2_RAT       O77505         LDVR_MOUSE     LDVR_RAT       
 Q92856         Q92673         O46131         Q95209         
 O42126         LDL1_XENLA     O88307         LDLR_CRIGR     
 LDLR_RAT       LDLR_HUMAN     Q22453         LDLR_MOUSE     
 Q90883         Q98931         LDL2_XENLA     Q14114         
 O76952         P79708         O77244         O01768         
 Q09967         YL_DROME       Q21629         O01552         
 O18260         GPCR_LYMST     O75074         O88204         
 NDL_DROME      
Subfamily:  Codes involving 4 elements
 Subfamily True positives..
 Q99876         PGBM_MOUSE     PGBM_HUMAN     
Subfamily:  Codes involving 3 elements
 Subfamily True positives..
 O14968         O18261         O18263         UN52_CAEEL     
 O88883         O75197         O75581         O88572         
 Q21340         Q22179         Q17496         AEGP_RAT       
Subfamily:  Codes involving 2 elements
 Subfamily True positives..
 Q19970         O62147         ENTK_BOVIN     ENTK_HUMAN     
 Q03711         ENTK_PIG       O44191         Q17797         
 CFAI_HUMAN     ENTK_MOUSE     Q21948         Q21496         
 Q93473         


  PROTEIN TITLES
   LRP1_HUMAN       LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 1 PRECURSOR
   Q61291           LOW DENSITY LIPOPROTEIN RECEPTOR RELATED PROTEIN (AM2 RECEPT
   LRP_CAEEL        LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN PRECURSOR (
   LRP1_CHICK       LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 1 PRECURSOR
   LRP2_HUMAN       LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2 PRECURSOR
   LDVR_CHICK       VERY LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR (VLDL RECEPT
   LDVR_RABIT       VERY LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR (VLDL RECEPT
   LDVR_HUMAN       VERY LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR (VLDL RECEPT
   LRP2_RAT         LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2 PRECURSOR
   O77505           VERY LOW DENSITY LIPOPROTEIN RECEPTOR VLDL-R2.
   LDVR_MOUSE       VERY LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR (VLDL RECEPT
   LDVR_RAT         VERY LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR (VLDL RECEPT
   Q92856           GP250 PRECURSOR.
   Q92673           LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN LR11 PRECUR
   O46131           LIPOPHORIN RECEPTOR PRECURSOR.
   Q95209           LR11.
   O42126           VITELLOGENIN RECEPTOR.
   LDL1_XENLA       LOW-DENSITY LIPOPROTEIN RECEPTOR 1 PRECURSOR (LDL RECEPTOR 1
   O88307           LR11.
   LDLR_CRIGR       LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR (LDL RECEPTOR).
   LDLR_RAT         LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR (LDL RECEPTOR).
   LDLR_HUMAN       LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR (LDL RECEPTOR).
   Q22453           SIMILARTO LDL RECEPTOR-RELATED PROTEIN. NCBI GI: 1055166.
   LDLR_MOUSE       LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR (LDL RECEPTOR).
   Q90883           LDL RECEPTOR HOMOLOGUE LR8B PROTEIN.
   Q98931           LDL RECEPTOR HOMOLOGUE LR8B PROTEIN.
   LDL2_XENLA       LOW-DENSITY LIPOPROTEIN RECEPTOR 2 PRECURSOR (LDL RECEPTOR 2
   Q14114           APOLIPOPROTEIN E RECEPTOR 2 PRECURSOR.
   O76952           PUTATIVE VITELLOGENIN RECEPTOR.
   P79708           LOW-DENSITY LIPOPROTEIN RECEPTOR.
   O77244           HEAD-ACTIVATOR BINDING PROTEIN PRECURSOR.
   O01768           SIMILARITY TO EGF-LIKE DOMAINS.
   Q09967           HYPOTHETICAL 62.2 KD PROTEIN B0244.8 IN CHROMOSOME III.
   YL_DROME         PUTATIVE VITELLOGENIN RECEPTOR PRECURSOR (YL).
   Q21629           SIMILAR TO CYSTEINE-RICH REPEAT REGIONS OF LDL RECEPTORS AND
   O01552           HYPOTHETICAL 294.4 KD PROTEIN.
   O18260           ZC101.1 PROTEIN.
   GPCR_LYMST       G protein COUPLED RECEPTOR GRL101 PRECURSOR.
   O75074           LDL RECEPTOR RELATED PROTEIN 105.
   O88204           LRP105.
   NDL_DROME        SERINE PROTEASE NUDEL PRECURSOR (EC 3.4.21.-).
 
   Q99876           APOLIPOPROTEIN E RECEPTOR 2 906.
   PGBM_MOUSE       BASEMENT MEMBRANE-SPECIFIC HEPARAN SULFATE PROTEOGLYCAN CORE
   PGBM_HUMAN       BASEMENT MEMBRANE-SPECIFIC HEPARAN SULFATE PROTEOGLYCAN CORE
 
   O14968           APOER2DELTA4-7.
   O18261           UNC-52 PROTEIN.
   O18263           UNC-52 PROTEIN.
   UN52_CAEEL       BASEMENT MEMBRANE PROTEOGLYCAN PRECURSOR (PERLECAN HOMOLOG).
   O88883           LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 5.
   O75197           LIPOPROTEIN RECEPTOR RELATED PROTEIN 5.
   O75581           LDL RECEPTOR-RELATED PROTEIN 6.
   O88572           LDL RECEPTOR-RELATED PROTEIN 6.
   Q21340           K08E5.3 PROTEIN.
   Q22179           LRX-1 PROTEIN.
   Q17496           B0393.7 PROTEIN.
   AEGP_RAT         APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
 
   Q19970           SIMILAR TO LDL-RECEPTOR LIGAND-BINDING REPEAT. NCBI GI: 1118
   O62147           F09B12.5 PROTEIN.
   ENTK_BOVIN       ENTEROPEPTIDASE PRECURSOR (EC 3.4.21.9) (ENTEROKINASE).
   ENTK_HUMAN       ENTEROPEPTIDASE PRECURSOR (EC 3.4.21.9) (ENTEROKINASE).
   Q03711           COMPLEMENT FACTOR I PRECURSOR (EC 3.4.21.45) (C3B/C4B INACTI
   ENTK_PIG         ENTEROPEPTIDASE PRECURSOR (EC 3.4.21.9) (ENTEROKINASE).
   O44191           T11F8.3 PROTEIN.
   Q17797           SIMILARITY TO LOW-DENSITY LIPOPROTEIN.
   CFAI_HUMAN       COMPLEMENT FACTOR I PRECURSOR (EC 3.4.21.45) (C3B/C4B INACTI
   ENTK_MOUSE       ENTEROPEPTIDASE (EC 3.4.21.9) (ENTEROKINASE).
   Q21948           SIMILAR TO LDL-RECEPTOR-RELATED PROTEINS.
   Q21496           SIMILARITY TO LDL-RECEPTOR CLASS A DOMAIN.
   Q93473           F14B4.1 PROTEIN.

SCAN HISTORY OWL21_1 2 250 NSINGLE OWL25_2 1 300 NSINGLE SPTR37_9f 5 700 NSINGLE SPTR37_9f 5 700 NSINGLE INITIAL MOTIF SETS LDLRECEPTOR1 Length of motif = 22 Motif number = 1 LDL receptor Cys-rich motif I - 1 PCODE ST INT GKCISYKWVCDGSAECQDGSDE LDLR_HUMAN 36 36 GKCIPYKWICDGSAECKDSSDE A40388 36 36 LDLRECEPTOR2 Length of motif = 22 Motif number = 2 LDL receptor Cys-rich motif II - 1 PCODE ST INT NRCIPQFWRCDGQVDCDNGSDE LDLR_HUMAN 79 21 NRCIPMSWKCDGQTDCENGSDE A40388 79 21 LDLRECEPTOR3 Length of motif = 22 Motif number = 3 LDL receptor Cys-rich motif III - 1 PCODE ST INT GKCISRQFVCDSDRDCLDGSDE LDLR_HUMAN 118 17 GKCISLDFVCDEDLDCDDGSDE A40388 118 17 LDLRECEPTOR4 Length of motif = 22 Motif number = 4 LDL receptor Cys-rich motif IV - 1 PCODE ST INT GECIHSSWRCDGGPDCKDKSDE LDLR_HUMAN 206 66 GECIHMSWKCDGGFDCKDKSDE A40388 204 64 LDLRECEPTOR5 Length of motif = 22 Motif number = 5 LDL receptor Cys-rich motif V - 1 PCODE ST INT GNCIHGSRQCDREYDCKDMSDE LDLR_HUMAN 245 17 GTCIHGSRQCDREYDCKDLSDE A40388 243 17 LDLRECEPTOR6 Length of motif = 22 Motif number = 6 LDL receptor Cys-rich motif VI - 1 PCODE ST INT GECITLDKVCNMARDCRDWSDE LDLR_HUMAN 286 19 GECITMDKVCNKKRDCRDWSDE A40388 284 19 FINAL MOTIF SETS LDLRECEPTOR1 Length of motif = 22 Motif number = 1 LDL receptor Cys-rich motif I - 5 PCODE ST INT KRCIPRVWVCDRDNDCVDGSDE LRP1_HUMAN 3464 3464 GRCIPISWTCDLDDDCGDRSDE Q61291 947 947 KKCIPAQYGCDGDNDCGDYSDE LRP_CAEEL 1112 1112 GRCIPISWTCDLDDDCGDRSDE LRP1_CHICK 944 944 NICIPRVYLCDGDNDCGDNSDE LRP2_HUMAN 2833 2833 GRCIPLLWKCDGDEDCSDGSDE LDVR_CHICK 61 61 GRCITQLWKCDGDEDCVDGSDE LDVR_RABIT 43 43 GRCITLLWKCDGDEDCVDGSDE LDVR_HUMAN 43 43 NICVPRAFLCDGDNDCGDGSDE LRP2_RAT 2834 2834 GRCITLLWKCDGDEDCTDGSDE O77505 43 43 GRCITLLWKCDGDEDCADGSDE LDVR_MOUSE 43 43 GRCITLLWKCDGDEDCTDGSDE LDVR_RAT 43 43 GMCIRSSWVCDGDNDCRDWSDE Q92856 1168 1168 GMCIRSSWVCDGDNDCRDWSDE Q92673 1168 1168 GHCIPLTWMCEGEDDCGDNSDE O46131 58 58 GMCIRSSWVCDGDNDCRDWSDE Q95209 1167 1167 GRCITSLWKCDGDEDCSDGSDE O42126 42 42 GKCIPYKWICDGSAECKDSSDE LDL1_XENLA 37 37 GMCIRSSWVCDGDNDCRDWSDE O88307 1168 1168 GKCIASKWVCDGSPECPDGSDE LDLR_CRIGR 37 37 GKCIVSKWVCDGSRECPDGSDE LDLR_RAT 37 37 GKCISYKWVCDGSAECQDGSDE LDLR_HUMAN 37 37 GRCIPMSWRCDGDIDCQNEEDE Q22453 537 537 GKCIASKWVCDGSPECPDGSDE LDLR_MOUSE 37 37 ERCIPAVWACDEDNDCSDNSDE Q90883 39 39 ERCIPAVWACDEDNDCSDNSDE Q98931 39 39 GKCIPYKWICDGSAECKDGSDE LDL2_XENLA 37 37 ERCIPSVWRCDEDDDCLDHSDE Q14114 57 57 SKCIDQTRRCDEHVDCGDGSDE O76952 1009 1009 GKCIPYKWLCDGQSECDDGSDE P79708 37 37 GDCIPLTWKCDMDTDCNDSSDE O77244 1070 1070 SQCIHPSWKCDGTNDCYDGSDE O01768 108 108 NACLPLSAKCDGINDCADASDE Q09967 250 250 EQCVDKERRCDNRKDCHDHSDE YL_DROME 1085 1085 DACLPISVKCDGVSDCENESDE Q21629 227 227 KKCVPKSNLCDGDDDCGDGSDE O01552 937 937 GHCLPVAQFCDRRVQCPDGDDE O18260 300 300 LQCVLMGSKCDGVSDCENGMDE GPCR_LYMST 51 51 GKCLPGPWQCNTVDECGDGSDE O75074 176 176 GKCLPGPWQCNMVDECGDGSDE O88204 176 176 ADRVDEERLCDGYEDCPMGEDE NDL_DROME 930 930 LDLRECEPTOR2 Length of motif = 22 Motif number = 2 LDL receptor Cys-rich motif II - 5 PCODE ST INT GRCIPARWKCDGEDDCGDGSDE LRP1_HUMAN 3505 19 GRCININWRCDNDNDCGDNSDE Q61291 988 19 HRCIPEQWKCDSDNDCGDGSDE LRP_CAEEL 1156 22 GRCININWRCDNDNDCGDNSDE LRP1_CHICK 985 19 GRCIPQHWYCDQETDCFDASDE LRP2_HUMAN 2874 19 GQCVPNRWQCDGDPDCEDGSDE LDVR_CHICK 100 17 GQCIPNRWQCDGDPDCEDGSDE LDVR_RABIT 82 17 GQCVPSRWKCDGDPDCEDGSDE LDVR_HUMAN 82 17 QRCIPSYWFCDGEADCADGSDE LRP2_RAT 2876 20 GQCVPNRWQCDGDPDCEDGSDE O77505 82 17 GQCVPNRWQCDGDPDCEDGSDE LDVR_MOUSE 82 17 GQCVPNRWQCDGDPDCEDGSDE LDVR_RAT 82 17 GHCIPQRWACDGDTDCQDGSDE Q92856 1209 19 GHCIPQRWACDGDTDCQDGSDE Q92673 1209 19 GRCIPSHWQCDNEKDCADGSDE O46131 100 20 GHCIPQRWACDGDADCQDGSDE Q95209 1208 19 GQCVPSRWECDGDPDCEDGSDE O42126 81 17 NRCIPMSWKCDGQTDCENGSDE LDL1_XENLA 80 21 GHCIPQRWACDGDADCQDGSDE O88307 1209 19 SRCIPNSWRCDGQTDCENGSDE LDLR_CRIGR 80 21 SRCIPDSWRCDGRTDCENGSDE LDLR_RAT 80 21 NRCIPQFWRCDGQVDCDNGSDE LDLR_HUMAN 80 21 FKCIPNKWVCDGEFDCEDKSDE Q22453 585 26 SRCIPDSWRCDGQVDCENDSDE LDLR_MOUSE 80 21 GHCIPDRWKCDGEEECSDGSDE Q90883 78 17 GHCIPDRWKCDGEEECSDGSDE Q98931 78 17 NRCIPMSWKCDGQTDCENGSDE LDL2_XENLA 80 21 GHCIHERWKCDGEEECPDGSDE Q14114 96 17 GMCIDVNTLCDGFPDCLDGSDE O76952 1052 21 NKCIPTSWHCDSQKDCENGSDE P79708 80 21 RCLPSLSWHCDGENDCGDGSDE O77244 1112 20 RTCMPKHWQCDGQPDCADGSDE O01768 161 31 KQCIKASHVCDGVAQCADGSDE Q09967 286 14 GKCVDSSLVCDGTNDCGDNSDE YL_DROME 1128 21 KNCIKASKVCDGIPDCDDGSDE Q21629 263 14 TTCLPMEFICDGKSDCYDGTDE O01552 979 20 NVCVPTVVVCDGWKDCHDGSDE O18260 340 18 TTCIDKILRCDRNDDCSNGLDE GPCR_LYMST 89 16 TRCLPVERRCDGLQDCGDGSDE O75074 225 27 TRCLPVERRCDGTQDCGDGSDE O88204 225 27 SMCYSRLERCDGFMNCLNGRDE NDL_DROME 980 28 LDLRECEPTOR3 Length of motif = 22 Motif number = 3 LDL receptor Cys-rich motif III - 5 PCODE ST INT NRCVPGRWQCDYDNDCGDNSDE LRP1_HUMAN 3546 19 GRCIPEHWTCDGDNDCGDYSDE Q61291 1026 16 GRCIPIYWLCDGDNDCYDGTDE LRP_CAEEL 1197 19 GRCIPVHWTCDGDNDCGDYSDE LRP1_CHICK 1023 16 GRCIPSEWICDGDNDCGDMSDE LRP2_HUMAN 2916 20 TQCIPVSWKCDGEKDCDSGEDE LDVR_CHICK 143 21 TQCIPVSWRCDGESDCDSGEDE LDVR_RABIT 125 21 TQCIPVSWRCDGENDCDSGEDE LDVR_HUMAN 125 21 GRCISGNWVCDGDNDCGDMSDE LRP2_RAT 2918 20 TQCIPVSWRCDGENDCYSGEDE O77505 125 21 TQCIPVSWRCDGENDCDNGEDE LDVR_MOUSE 125 21 TQCIPESWRCDGENDCDNGEDE LDVR_RAT 125 21 GTCIPSSKHCDGLRDCSDGSDE Q92856 1247 16 GTCIPSSKHCDGLRDCSDGSDE Q92673 1247 16 GECVPLAWMCDDNPDCSDGSDE O46131 143 21 GTCIPSTKHCDGLHDCSDGSDE Q95209 1246 16 TQCIPLSWKCDGERDCANAEDE O42126 124 21 GKCISLDFVCDEDLDCDDGSDE LDL1_XENLA 119 17 GTCIPSSKHCDGLRDCPDGSDD O88307 1247 16 GKCISQKFVCDQDQDCVDGSDE LDLR_CRIGR 119 17 GKCISRQFVCDQDWDCLDGSDE LDLR_RAT 119 17 GKCISRQFVCDSDRDCLDGSDE LDLR_HUMAN 119 17 SLCIPETWVCDGQRDCTNGKDE Q22453 629 22 GKCISPQFVCDGDRDCLDGSDE LDLR_MOUSE 119 17 NKCIPSSWRCDGQKDCESGIDE Q90883 121 21 NKCIPSSWRCDGQKDCESGIDE Q98931 121 21 GKCISLDFVCDQDQDCDDGSDE LDL2_XENLA 119 17 HKCVPASWRCDGEKDCEGGADE Q14114 139 21 GQCIPKWWECDGNPDCTDGSDE O76952 1099 25 GNCISLKFVCDDDRDCADGSDE P79708 119 17 NRCISKSWLCDGDNDCSDGFDE O77244 1150 16 KKCIPLEQKCDGRRDCPDGEDE O01768 201 18 GTCIMRTQVCDGKKDCTDGMDE Q09967 326 18 GSCIAGSWECDGRIDCSDGSDE YL_DROME 1168 18 GTCIMRSQVCDGKHDCLDGIDE Q21629 303 18 TKCIIKSKRCNGVQECDNGADE O01552 1023 22 GQCIEESLKCNRKYDCADGSDE O18260 441 79 HFCVPRDKQCDFLDDCGDNSDE GPCR_LYMST 129 18 GYCLPWEQPCGSSSDSDGGSLG O75074 366 119 GYCLPWEQPCGSSSEGDDGSTG O88204 366 119 KRCISKRQRCDRNVDCLGGEDE NDL_DROME 1406 404 LDLRECEPTOR4 Length of motif = 22 Motif number = 4 LDL receptor Cys-rich motif IV - 5 PCODE ST INT GRCIAGRWKCDGDHDCADGSDE LRP1_HUMAN 3585 17 GLCIPLRWRCDGDTDCMDSSDE Q61291 1074 26 RQCVPLRNHCDGQSDCEDGSDE LRP_CAEEL 1239 20 GLCIPMRWRCDGDTDCMDSSDE LRP1_CHICK 1071 26 RRCIPQSWVCDGDVDCTDGYDE LRP2_HUMAN 2963 25 GQCISKSFVCNGQDDCSDGSDE LDVR_CHICK 182 17 GRCISRNFVCNGQDDCSDGSDE LDVR_RABIT 164 17 GRCISRNFVCNGQDDCSDGSDE LDVR_HUMAN 164 17 RRCIPQYWVCDGDADCSDALDE LRP2_RAT 2965 25 GRCISRNFMCNGQDDCSDGSDE O77505 164 17 GRCVSRNFVCNGQDDCDDGSDE LDVR_MOUSE 164 17 GRCVSRNFVCNGQDDCDDGSDE LDVR_RAT 164 17 QQCLFHSMVCDGIIQCRDGSDE Q92856 1287 18 QQCLFHSMVCDGIIQCRDGSDE Q92673 1287 18 SKCIQQRWVCDRDDDCGDGSDE O46131 181 16 QQCLFHSMVCDGIIQCRDGSDE Q95209 1286 18 GRCISSTFVCNGQNDCSDGSDE O42126 163 17 GICIPKLWACDGDPDCEDGSDE LDL1_XENLA 159 18 QQCLFHSMVCDGIVQCRDGSDE O88307 1287 18 WPCIPSLWACDGDDDCEDGSDE LDLR_CRIGR 158 17 SSCIPSLWACDGDRDCDDGSDE LDLR_RAT 158 17 STCIPQLWACDNDPDCEDGSDE LDLR_HUMAN 158 17 GNCIFKNWVCDGEEDCSDGSDE Q22453 670 19 SICIPSLWACDGDVDCVDGSHE LDLR_MOUSE 158 17 KTCISINFVCDGYNNCGDGSDE Q90883 159 16 KTCISINFVCDGYNNCGDGSDE Q98931 159 16 GICIPKLWACDGDRDCEDGSDE LDL2_XENLA 159 18 RSCLAAVFVCDGDDDCGDGSDE Q14114 177 16 GHCIEDRLLCDGNNDCGDNSDE O76952 1140 19 KLCIPQLWACDDDPDCPDESDE P79708 159 18 NNCIASFFKCNGLDDCGDNSDE O77244 1204 32 HRCIPMAWRCDGTDDCMDNAKS O01768 243 20 KMCISRRKVCDGTPDCDDGADE Q09967 412 64 GQCLDRSLVCDGHNDCGDKSDE YL_DROME 1208 18 NKCIKRSKVCDGIFDCEDGADE Q21629 387 62 GLCIKQSQVCDGKMQCLDGLDE O01552 1063 18 TRCFHYDRLCDGTDDCGDGSDE O18260 526 63 SQCVAFGNLCDGLVDCVDGSDE GPCR_LYMST 168 17 QGCFSEPQRCDGWWHCASGRDE O75074 389 1 QGCFSEPQRCDGWWHCASGRDE O88204 389 1 SQIVDIMMRCDRKVDCEDGTDE NDL_DROME 1719 291 LDLRECEPTOR5 Length of motif = 22 Motif number = 5 LDL receptor Cys-rich motif V - 5 PCODE ST INT GHCIPLRWRCDADADCMDGSDE LRP1_HUMAN 3623 16 ARCISKAWVCDGDSDCEDNSDE Q61291 1117 21 GLCIPASWKCDGQQDCDDGSDE LRP_CAEEL 1281 20 ARCISKAWVCDGDSDCEDNSDE LRP1_CHICK 1114 21 GLCIPKIFRCDRHNDCGDYSDE LRP2_HUMAN 3003 18 STCIPISWVCDDDADCSDHSDE LDVR_CHICK 221 17 SSCIPISWVCDDDADCSDQSDE LDVR_RABIT 203 17 SSCIPISWVCDDDADCSDQSDE LDVR_HUMAN 203 17 GRCVRQSFRCDRRNDCGDYSDE LRP2_RAT 3005 18 PPCIPISWVCDDDADCSDQSDE O77505 203 17 SSCIPLSWVCDDDADCSDQSDE LDVR_MOUSE 203 17 SSCIPLSWVCDDDADCSDQSDE LDVR_RAT 203 17 GVCISLIWKCDGMDDCGDYSDE Q92856 1335 26 GVCISLIWKCDGMDDCGDYSDE Q92673 1335 26 NMCITARWQCDGDLDCQDGSDE O46131 222 19 GVCISLIWKCDGMDDCGDYSDE Q95209 1334 26 FSCIPLSWVCDDEPDCADHSDE O42126 202 17 GECIHMSWKCDGGFDCKDKSDE LDL1_XENLA 205 24 GVCISLIWKCDGMDDCGDYSDE O88307 1335 26 SECIHRSWVCDGSADCKDKSDE LDLR_CRIGR 208 28 SECIHRSWVCDGAADCKDKSDE LDLR_RAT 208 28 GECIHSSWRCDGGPDCKDKSDE LDLR_HUMAN 207 27 GECIPSRWRCDAEVDCKDHSDE Q22453 717 25 SECIHRSWVCDGEADCKDKSDE LDLR_MOUSE 208 28 SVCIPQLWVCDNQADCEDHSDE Q90883 198 17 SVCIPQLWVCDNQADCEDHSDE Q98931 198 17 GECIHMSWKCDAGYDCKHKSDD LDL2_XENLA 205 24 GACIPERWVCDRQFDCEDRSDE Q14114 219 20 GKCLDIAVRCNGTAECPDGEDE O76952 1188 26 GECIHMKWRCDGGVDCRDQSDE P79708 207 26 KECYQKISKCDGMLDCRDGSDE O77244 1252 26 VACELTAVLCDGIQDCSDGFDE O01768 292 27 HKCLDSSRRCDGVWDCEDKSDE Q09967 454 20 KICLPSAVRCNGTTECPRGEDE YL_DROME 1255 25 NKCLESSRRCDGVWDCEDKSDE Q21629 429 20 STCLDLIFRCDGVADCEDSSDE O01552 1106 21 SRCSSVQFECKRDGKCIDKALE O18260 577 29 GSLIKKEFVCDGWVDCKLTFAD GPCR_LYMST 205 15 GLCYTPADRCNNQKSCPDGADE O75074 428 17 GLCYAPADRCNNQKSCPDGADE O88204 428 17 LKGSLKGLICDGKADCEDLTDE NDL_DROME 1749 8 LDLRECEPTOR6 Length of motif = 22 Motif number = 6 LDL receptor Cys-rich motif VI - 5 PCODE ST INT TLCKPLAWKCDGEDDCGDNSDE LRP1_HUMAN 3664 19 SVCLPPDKLCDGKDDCGDGSDE Q61291 1158 19 GRCILNNWLCDGENDCGDGSDE LRP_CAEEL 1323 20 SICLPPEKLCDGSDDCGDGSDE LRP1_CHICK 1155 19 GRCISKTFVCDEDNDCGDGSDE LRP2_HUMAN 3042 17 GECIHKKWRCDGDPDCKDGSDE LDVR_CHICK 267 24 GECIHKKWRCDGDPDCKDGSDE LDVR_RABIT 249 24 GECIHKKWRCDGDPDCKDGSDE LDVR_HUMAN 249 24 GRCIPRFFVCDEDNDCGDGSDE LRP2_RAT 3044 17 GECIHKKWRCDGDPDCKDGSDE O77505 249 24 GECIHKKWRCDGDPDCKDGSDE LDVR_MOUSE 249 24 GECIHKKWRCDGDPDCKDGSDE LDVR_RAT 249 24 GHCIPNRWKCDRENDCGDWSDE Q92856 1379 22 GHCIPNRWKCDRENDCGDWSDE Q92673 1379 22 MTCIHQSWVCDGDRDCPDGSDE O46131 266 22 GHCIPNRWKCDRENDCGDWSDE Q95209 1378 22 GECIHKKWRCDGDADCKDKSDE O42126 248 24 GTCIHGSRQCDREYDCKDLSDE LDL1_XENLA 244 17 GHCIPNRWKCDRENDCGDWSDE O88307 1379 22 GTCIHGSRQCDREYDCKDMSDE LDLR_CRIGR 247 17 GSCIHGSRQCDREHDCKDMSDE LDLR_RAT 247 17 GNCIHGSRQCDREYDCKDMSDE LDLR_HUMAN 246 17 HNCINKAFVCDGELDCSDGSDE Q22453 760 21 GSCIHGSRQCDREHDCKDMSDE LDLR_MOUSE 247 17 GECILLNWKCDGDEDCKDKSDE Q90883 244 24 GECILLNWKCDGDEDCKDKSDE Q98931 244 24 GTCIHGSRQCDREYDCKDLSDE LDL2_XENLA 244 17 GECVHLGWRCDGDRDCKDKSDE Q14114 270 29 GKCIRKEWRCDKEVDCDDGSDE O76952 1225 15 GTCIHGSFQCNREFNCHDQSDE P79708 246 17 GECISLKKVCDTRKDCPLGEDE O77244 1295 21 GQCIDSGRLCDASVDCVDGSDE O01768 333 19 KKCLPAFTRCNGVADCSDGSDE Q09967 492 16 RECIRREFRCDGQKDCGDGSDE YL_DROME 1294 17 KKCLPFHTRCNGVAECSDGSDE Q21629 467 16 GKCLRSFQLCDGFPDCLTGEDE O01552 1151 23 GECIDKRRVCDTRPDCLDASDE O18260 777 178 TRCIQKSNVCDGYCDCKTCDDE GPCR_LYMST 243 16 NLCIFETWRCDGQEDCQDGSDE O75074 465 15 NLCIFETWRCDGQEDCQDGSDE O88204 465 15 KTCLPLSKRCDNKVDCKFKEDE NDL_DROME 1787 16

User query: Display/Full Code "LDLRECEPTOR"