WORKLIST ENTRIES (1):
INTRLEUKIN19 View alignment Interleukin-19 signature
Type of fingerprint: COMPOUND with 3 elements
Links:
PRINTS; PR00264 INTERLEUKIN1; PR00265 INTERLEUKIN2; PR00430 INTERLEUKIN3
PRINTS; PR00431 INTERLEUKIN4; PR00432 INTERLEUKIN5; PR00434 INTERLEUKIN6
PRINTS; PR00435 INTERLEUKIN7; PR00436 INTERLEUKIN8; PR01926 INTERLEUKIN9
PRINTS; PR01294 INTRLEUKIN10; PR01927 INTRLEUKIN11; PR01928 INTRLEUKN12B
PRINTS; PR01929 INTRLEUKIN13; PR01930 INTRLEUKIN15; PR01931 INTRLEUKIN16
PRINTS; PR01932 INTRLEUKIN17; PR01933 INTRLEUKIN18; PR01935 INTRLEUKIN20
PRINTS; PR01936 INTRLEUKIN22; PR01937 INTRLEUKIN24; PR01938 INTRLEUKIN34
PRINTS; PR00433 IL6GCSFMGF; PR00437 SMALLCYTKCX
PDB; 1N1F 3Dinfo
SCOP; 1N1F
CATH; 1N1F
MIM; 605687
Creation date 30-JUL-2008
1. FICKENSCHER, H., HOR, S., KUPERS, H., KNAPPE, A., WITTMANN, S. AND
STICHT, H.
The interleukin-10 family of cytokines.
TRENDS IMMUNOL. 23 89-96 (2002).
2. CHANG, C., MAGRACHEVA, E., KOZLOV, S., FONG, S., TOBIN, G., KOTENKO, S.,
WLODAWER, A. AND ZDANOV, A.
Crystal structure of interleukin-19 defines a new subfamily of helical
cytokines.
J.BIOL.CHEM. 278 3308-3313 (2003).
Interleukins (IL) are a group of cytokines that play an important role in
the immune system. They modulate inflammation and immunity by regulating
growth, mobility and differentiation of lymphoid and other cells.
Interleukin-19 (IL-19) belongs to the family of Il-10-related cytokines,
which includes IL-10, -19, -20, -22, -24 and -26 [1]. IL-19 shares a
receptor complex with IL-20, indicating that their biological activities
may overlap [2]. Both cytokines may play an important role in regulating
the development and proper functioning of skin [2].
INTRLEUKIN19 is a 3-element fingerprint that provides a signature for
interleukin-19. The fingerprint was derived from an initial alignment of 2
sequences: the motifs were drawn from conserved regions spanning virtually
the full alignment length, each encompassing a short region of beta strand.
Two iterations on SPTR55_38f were required to reach convergence, at which
point a true set comprising 3 sequences was identified.
SUMMARY INFORMATION
3 codes involving 3 elements
0 codes involving 2 elements
COMPOSITE FINGERPRINT INDEX
3| 3 3 3
2| 0 0 0
--+----------------
| 1 2 3
True positives..
IL19_MOUSE Q14BK1_MOUSE IL19_HUMAN
PROTEIN TITLES
IL19_MOUSE Interleukin-19 precursor (IL-19) - Mus musculus (Mouse).
Q14BK1_MOUSE Interleukin 19 - Mus musculus (Mouse).
IL19_HUMAN Interleukin-19 precursor (IL-19) (Melanoma differentiation-a
SCAN HISTORY
SPTR55_38f 2 300 NSINGLE
INITIAL MOTIF SETS
INTRLEUKIN191 Length of motif = 13 Motif number = 1
Interleukin-19 motif I - 1
PCODE ST INT
ISTDMHHIEESFQ IL19_HUMAN 30 30
ISVDMRLIEKSFH IL19_MOUSE 30 30
INTRLEUKIN192 Length of motif = 12 Motif number = 2
Interleukin-19 motif II - 1
PCODE ST INT
FKDHQEPNPKIL IL19_HUMAN 90 47
FQDHQERSLEVL IL19_MOUSE 89 46
INTRLEUKIN193 Length of motif = 14 Motif number = 3
Interleukin-19 motif III - 1
PCODE ST INT
QEATNATRVIHDNY IL19_HUMAN 131 29
QEATNATRIIHDNY IL19_MOUSE 130 29
FINAL MOTIF SETS
INTRLEUKIN191 Length of motif = 13 Motif number = 1
Interleukin-19 motif I - 2
PCODE ST INT
ISVDMRLIEKSFH IL19_MOUSE 30 30
ISVDMRLIEKSFH Q14BK1_MOUSE 30 30
ISTDMHHIEESFQ IL19_HUMAN 30 30
INTRLEUKIN192 Length of motif = 12 Motif number = 2
Interleukin-19 motif II - 2
PCODE ST INT
FQDHQERSLEVL IL19_MOUSE 89 46
FQDHQERSLEVL Q14BK1_MOUSE 89 46
FKDHQEPNPKIL IL19_HUMAN 90 47
INTRLEUKIN193 Length of motif = 14 Motif number = 3
Interleukin-19 motif III - 2
PCODE ST INT
QEATNATRIIHDNY IL19_MOUSE 130 29
QEATNATRIIHDNY Q14BK1_MOUSE 130 29
QEATNATRVIHDNY IL19_HUMAN 131 29
User query: Display/Full Code "INTRLEUKIN19"