WORKLIST ENTRIES (1):
GLHYDRLASE11 View alignment View Structure Glycosyl hydrolase family 11 signature
Type of fingerprint: COMPOUND with 6 elements
Links:
PRINTS; PR00131 GLHYDRLASE1; PR00132 GLHYDRLASE2; PR00133 GLHYDRLASE3
PRINTS; PR00732 GLHYDRLASE4; PR00733 GLHYDRLASE6; PR00734 GLHYDRLASE7
PRINTS; PR00735 GLHYDRLASE8; PR00134 GLHYDRLASE10; PR00736 GLHYDRLASE15
PRINTS; PR00737 GLHYDRLASE16; PR00738 GLHYDRLASE20; PR00739 GLHYDRLASE26
PRINTS; PR00740 GLHYDRLASE27; PR00741 GLHYDRLASE29; PR00843 GLHYDRLASE30
PRINTS; PR00742 GLHYDRLASE35; PR00743 GLHYDRLASE36; PR00744 GLHYDRLASE37
PRINTS; PR00745 GLHYDRLASE39; PR00746 GLHYDRLASE41; PR00747 GLHYDRLASE47
PRINTS; PR00844 GLHYDRLASE48; PR00845 GLHYDRLASE52; PR00846 GLHYDRLASE56
PRINTS; PR00849 GLHYDRLASE58; PR00850 GLHYDRLASE59; PR00748 MELIBIASE
PRINTS; PR00137 LYSOZYME; PR00684 T4LYSOZYME; PR00749 LYSOZYMEG
PRINTS; PR00110 ALPHAAMYLASE; PR00750 BETAAMYLASE
INTERPRO; IPR001137
PROSITE; PS00776 GLYCOSYL_HYDROL_F11_1; PS00777 GLYCOSYL_HYDROL_F11_2
PFAM; PF00457 glycosyl_hydro6
PDB; 1XNB 3Dinfo; 1XND 3Dinfo; 1XYN 3Dinfo; 1ENX 3Dinfo
SCOP; 1XNB; 1XND; 1XYN; 1ENX
CATH; 1XNB; 1XND; 1XYN; 1ENX
Creation date 27-JUN-1998; UPDATE 21-JUN-1999
1. HENRISSAT, B. AND BAIROCH, A.
New families in the classification of glycosyl hydrolases based on amino
acid sequence similarities.
BIOCHEM.J. 293 781-788 (1993).
2. HENRISSAT, B.
A classification of glycosyl hydrolases based on amino acid sequence
similarities.
BIOCHEM.J. 280 309-316 (1991).
3. GONZALEZ-CANDELAS, L., RAMON, D. AND POLIANA, J.
Sequences and homology analysis of 2 genes encoding beta-glucosidases
from Bacillus polymyxa.
GENE 95 31-38 (1990).
4. EL HASSOUNI, M., HENRISSAT, B., CHIPPAUX, M. AND BARRAS, F.
Nucleotide sequences of the Arb genes, which control beta-glucosidase
utilisation in Erwinia chrysanthemi - Comparison with the Escherichia
coli Bgl operon and evidence for a new beta-glycohydrolase family
including enzymes from eubacteria, archaebacteria and humans.
J.BACTERIOL. 174 765-777 (1992).
5. JEFFRIES, T.W.
Biochemistry and Genetics of Microbrial Xylanases.
CURR.OPIN.BIOTECH. 7 337-342 (1996).
6. BIELY, P., VRSANSKA, M., TENKANEN, M. AND KLUEPFEL, D.
Endo-beta-1,4-xylanase families: differences in catalytic properties.
J.BIOTECH. 57 151-166 (1997).
7.LUBECK, P.S., PAULIN, L., DEGEFU, Y., LUBECK, M., ALEKHINA, I.,
BULAT, S.A. AND COLLINGE, D.B.
PCR cloning, DNA sequencing and phylogenetic analysis of a xylanase gene
from the phytopathogenic fungus Ascochyta pisi Lib.
PHYSIOL.MOL.PLANT PATH. 51 377-389 (1997).
O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that
hydrolyse the glycosidic bond between two or more carbohydrates, or between
a carbohydrate and a non-carbohydrate moiety. A classification system for
glycosyl hydrolases, based on sequence similarity, has led to the
definition of around 60 different families [1-4] (http://expasy.hcuge.ch/
cgi-bin/lists?glycosid.txt).
The xylanases are shared between families 10 and 11 [5-7]: family 10
generally encompasses the larger, more complex xylanases that produce
smaller oligosaccharides; family 11 (endo-1,4-beta-xylanases (EC 3.2.1.8))
encompasses xylanases more specific for xylan [5,6]. The pH spectrum in
which these enzymes operate is quite diverse. It is thought that there are
at least five phylogenetically consistent groups within this family [7].
GLHYDRLASE11 is a 6-element fingerprint that provides a signature for
glycosyl hydrolase family 11. The fingerprint was derived from an initial
alignment of 25 sequences: the motifs were drawn from conserved regions
spanning the N-terminal portion of the alignment - motif 1 encodes most of
strand 6 and part of the adjacent loop; motif 2 spans some of the
aforementioned loop and most of strand 7, and includes an active site Glu;
motif 3 encodes the N-terminus of strand 9; motifs 4 and 5 span strand 10,
leading into the adjacent loop; and motif 6 spans the C-terminus of helix 1
and most of the appended loop. Three iterations on OWL30.2 were required to
reach convergence, at which point a true set comprising 75 sequences was
identified. Two partial matches were also found: S48865 is an endo-1,4-beta-
xylanase that fails to make a significant match with motif 4; and MGNENDOXYL
is a fragment that lacks the portion of sequence bearing the last 2 motifs.
(nb. MGNENDOBX is a fragment that matches only a single motif).
An update on SPTR37_9f identified a true set of 65 sequences, and 4
partial matches.
SUMMARY INFORMATION
65 codes involving 6 elements
1 codes involving 5 elements
0 codes involving 4 elements
0 codes involving 3 elements
3 codes involving 2 elements
COMPOSITE FINGERPRINT INDEX
6| 65 65 65 65 65 65
5| 1 1 1 0 1 1
4| 0 0 0 0 0 0
3| 0 0 0 0 0 0
2| 0 2 0 2 1 1
--+-------------------------------
| 1 2 3 4 5 6
True positives..
Q56265 XYNB_STRLI XYN1_EMENI XYN2_EMENI
XYN2_ASPNG O08346 XYNB_ASPAK XYN1_COCCA
O52779 O52780 O87118 O87119
Q56013 Q59962 P77853 O52375
XYND_CELFI XYNC_STRLI Q00263 Q59257
XYNA_BACST O13447 Q59254 XYNA_BACCI
XYNA_BACSU Q43993 Q12579 Q59256
Q00350 Q12580 XYNA_BACPU Q02244
XYN2_TRIRE XYN_TRIHA O74716 P87037
Q99015 XYNA_CLOSR XYN1_HUMIN XYNA_CLOAB
Q52644 XYNA_THELA Q59674 Q59300
XYN1_TRIRE XYNA_SCHCO XYNC_FIBSU Q12562
Q59790 XYNA_RUMFL Q52753 XYN2_MAGGR
XYND_RUMFL Q12549 XYN1_ASPAW XYN1_ASPNG
XYN3_ASPAK XYN1_ASPTU Q00351 XYNA_NEOPA
Q01421 Q92257 Q12666 XYNA_PIRSP
Q92397
Subfamily: Codes involving 5 elements
Subfamily True positives..
Q01426
PROTEIN TITLES
Q56265 ENDO 1,4-BETA-D-XYLANASE PRECURSOR - THERMOMONOSPORA FUSCA.
XYNB_STRLI ENDO-1,4-BETA-XYLANASE B PRECURSOR (EC 3.2.1.8) (XYLANASE B)
XYN1_EMENI ENDO-1,4-BETA-XYLANASE 1 PRECURSOR (EC 3.2.1.8) (XYLANASE 1)
XYN2_EMENI ENDO-1,4-BETA-XYLANASE 2 PRECURSOR (EC 3.2.1.8) (XYLANASE 2)
XYN2_ASPNG ENDO-1,4-BETA-XYLANASE II PRECURSOR (EC 3.2.1.8) (XYLANASE I
O08346 XYLANASE PRECURSOR (EC 3.2.1.8) (ENDO-1,4-BETA-XYLANASE) (1,
XYNB_ASPAK ENDO-1,4-BETA-XYLANASE B PRECURSOR (EC 3.2.1.8) (XYLANASE B)
XYN1_COCCA ENDO-1,4-BETA-XYLANASE I PRECURSOR (EC 3.2.1.8) (XYLANASE I)
O52779 XYLANASE V - CLOSTRIDIUM THERMOCELLUM.
O52780 XYLANASE U - CLOSTRIDIUM THERMOCELLUM.
O87118 XYLANASE - CLOSTRIDIUM THERMOCELLUM.
O87119 XYLANASE - CLOSTRIDIUM THERMOCELLUM.
Q56013 XYLANASE PRECURSOR - STREPTOMYCES SP.
Q59962 ENDO-1,4-BETA-XYLANASE (EC 3.2.1.8) (1,4-BETA-D-XYLAN XYLANO
P77853 BETA-1,4-XYLANASE 229B (EC 3.2.1.8) (1,4-BETA-D-XYLAN XYLANO
O52375 FAMILY 11 XYLANASE (EC 3.2.1.8) (ENDO-1,4-BETA-XYLANASE) (1,
XYND_CELFI ENDO-1,4-BETA-XYLANASE D PRECURSOR (EC 3.2.1.8) (XYLANASE D)
XYNC_STRLI ENDO-1,4-BETA-XYLANASE C PRECURSOR (EC 3.2.1.8) (XYLANASE C)
Q00263 ENDO-1,4-BETAXYLANASE PRECURSOR - ASCOCHYTA PISI.
Q59257 ENDO-1, 4-BETA-XYLANASE PRECURSOR (EC 3.2.1.8) - BACILLUS SP
XYNA_BACST ENDO-1,4-BETA-XYLANASE A PRECURSOR (EC 3.2.1.8) (XYLANASE A)
O13447 BETA-1,4-XYLANASE PRECURSOR - COCHLIOBOLUS SATIVUS.
Q59254 XYLANASE (EC 3.2.1.8) (ENDO-1,4-BETA-XYLANASE) (1,4-BETA-D-X
XYNA_BACCI ENDO-1,4-BETA-XYLANASE PRECURSOR (EC 3.2.1.8) (XYLANASE) (1,
XYNA_BACSU ENDO-1,4-BETA-XYLANASE A PRECURSOR (EC 3.2.1.8) (XYLANASE A)
Q43993 XYLANASE I PRECURSOR - AEROMONAS CAVIAE.
Q12579 ENDO-BETA1,4-XYLANASE A (EC 3.2.1.8) - CHAETOMIUM GRACILE.
Q59256 ENDO-1, 4-BETA-XYLANASE PRECURSOR (EC 3.2.1.8) (ENDO-1,4-BET
Q00350 ENDO-B-1,4-XYLANASE XYL2 PRECURSOR - COCHLIOBOLUS CARBONUM (
Q12580 ENDO-BETA1,4-XYLANASE (EC 3.2.1.8) - CHAETOMIUM GRACILE.
XYNA_BACPU ENDO-1,4-BETA-XYLANASE A PRECURSOR (EC 3.2.1.8) (XYLANASE A)
Q02244 ENDOXYLANASE II - TRICHODERMA REESEI (HYPOCREA JECORINA).
XYN2_TRIRE ENDO-1,4-BETA-XYLANASE 2 PRECURSOR (EC 3.2.1.8) (XYLANASE 2)
XYN_TRIHA ENDO-1,4-BETA-XYLANASE (EC 3.2.1.8) (XYLANASE) (1,4-BETA-D-X
O74716 ENDO-1,4-BETA-XYLANASE PRECURSOR (EC 3.2.1.8) - CLAVICEPS PU
P87037 XYLANASE XYNG1 - ASPERGILLUS ORYZAE.
Q99015 BETA-XYLANASE PRECURSOR - TRICHODERMA REESEI (HYPOCREA JECOR
XYNA_CLOSR ENDO-1,4-BETA-XYLANASE A PRECURSOR (EC 3.2.1.8) (XYLANASE A)
XYN1_HUMIN ENDO-1,4-BETA-XYLANASE 1 PRECURSOR (EC 3.2.1.8) (XYLANASE 1)
XYNA_CLOAB ENDO-1,4-BETA-XYLANASE PRECURSOR (EC 3.2.1.8) (XYLANASE) (1,
Q52644 XYNA - RUMINOCOCCUS ALBUS.
XYNA_THELA ENDO-1,4-BETA-XYLANASE PRECURSOR (EC 3.2.1.8) (XYLANASE) (1,
Q59674 ENDO-BETA-1,4-XYLANASE (EC 3.2.1.8) (ENDO-1,4-BETA-XYLANASE)
Q59300 ENDO-BETA-1,4-XYLANASE PRECURSOR (EC 3.2.1.8) (ENDO-1,4-BETA
XYN1_TRIRE ENDO-1,4-BETA-XYLANASE 1 PRECURSOR (EC 3.2.1.8) (XYLANASE 1)
XYNA_SCHCO ENDO-1,4-BETA-XYLANASE A (EC 3.2.1.8) (XYLANASE A) (1,4-BETA
XYNC_FIBSU ENDO-1,4-BETA-XYLANASE C PRECURSOR (EC 3.2.1.8) (XYLANASE C)
Q12562 ENDO-1,4-BETA-XYLANASE PRECURSOR (EC 3.2.1.8) (1,4-BETA-D-XY
Q59790 XYLANASE 1 PRECURSOR (EC 3.2.1.8) (ENDO-1,4-BETA-XYLANASE) (
XYNA_RUMFL BIFUNCTIONAL ENDO-1,4-BETA-XYLANASE XYLA PRECURSOR (EC 3.2.1
Q52753 XYNB PRECURSOR - RUMINOCOCCUS FLAVEFACIENS.
XYN2_MAGGR ENDO-1,4-BETA-XYLANASE 22 PRECURSOR (EC 3.2.1.8) (XYLANASE 2
XYND_RUMFL XYLANASE/BETA-GLUCANASE PRECURSOR [INCLUDES: ENDO-1,4-BETA-X
Q12549 XYLANASE (EC 3.2.1.8) (ENDO-1,4-BETA-XYLANASE) (1,4-BETA-D-X
XYN1_ASPAW ENDO-1,4-BETA-XYLANASE I PRECURSOR (EC 3.2.1.8) (XYLANASE I)
XYN1_ASPNG ENDO-1,4-BETA-XYLANASE I PRECURSOR (EC 3.2.1.8) (XYLANASE I)
XYN3_ASPAK ENDO-1,4-BETA-XYLANASE 3 PRECURSOR (EC 3.2.1.8) (XYLANASE 3)
XYN1_ASPTU ENDO-1,4-BETA-XYLANASE I PRECURSOR (EC 3.2.1.8) (XYLANASE I)
Q00351 ENDO-B-1,4-XYLANASE XYL3 PRECURSOR - COCHLIOBOLUS CARBONUM (
XYNA_NEOPA BIFUNCTIONAL ENDO-1,4-BETA-XYLANASE A PRECURSOR (EC 3.2.1.8)
Q01421 ENDOXYLANASE - NEOCALLIMASTIX FRONTALIS (RUMEN FUNGUS).
Q92257 XYLANASE - ORPINOMYCES SP.
Q12666 ENDO-1,4-BETA-XYLANASE B PRECURSOR (EC 3.2.1.8) (XYLANASE B)
XYNA_PIRSP ENDO-1,4-BETA-XYLANASE A PRECURSOR (EC 3.2.1.8) (1,4-BETA-D-
Q92397 XYLANASE PRECURSOR - CRYPTOCOCCUS SP. S-2.
Q01426 ENDOXYLANASE - NEOCALLIMASTIX FRONTALIS (RUMEN FUNGUS).
SCAN HISTORY
OWL30_2 3 1120 NSINGLE
SPTR37_9f 4 1090 NSINGLE
INITIAL MOTIF SETS
GLHYDRLASE111 Length of motif = 10 Motif number = 1
Glycosyl hydrolase familly 11 motif I - 1
PCODE ST INT
YLAVYGWVNY XYN1_ASPAW 93 93
YLAVYGWVNY XYN1_ASPNG 93 93
YLAVYGWVNY XYN1_ASPTU 92 92
YLAVYGWVNY XYN3_ASPAK 93 93
YLCVYGWTQS XYNA_BACPU 107 107
YLCVYGWTSS XYNA_CLOAB 139 139
YLCVYGWTRN XYNA_CLOSR 111 111
YMCVYGWTRN XYNA_RUMFL 109 109
LLSVYGWSTN XYN1_TRIRE 113 113
YLAVYGWTRN XYN1_COCCA 102 102
YLAVYGWTQN XYN1_EMENI 108 108
YLAVYGWTRN XYN1_HUMIN 108 108
YLSVYGWTTD XYN2_ASPNG 108 108
YLSVYGWTQN XYN2_EMENI 104 104
YLCIYGWTQN XYN2_MAGGR 113 113
YLSVYGWSRN XYN2_TRIRE 105 105
YLTLYGWTRS XYNA_BACCI 93 93
YLTLYGWTRS XYNA_BACSU 93 93
YLTLYGWTRN XYNA_BACST 91 91
YLSVYGWTRS XYNA_SCHCO 74 74
YLSVYGWTTD XYNB_ASPAK 108 108
YLALYGWTSN XYNB_STRLI 115 115
YGCLYGWTSN XYNC_STRLI 121 121
YLTLYGWTQS XYND_CELFI 113 113
YLSIYGWSRN XYN_TRIHA 73 73
GLHYDRLASE112 Length of motif = 11 Motif number = 2
Glycosyl hydrolase familly 11 motif II - 1
PCODE ST INT
PQAEYYIVEDY XYN1_ASPAW 103 0
PQAEYYIVEDY XYN1_ASPNG 103 0
PQAEYYIVEDY XYN1_ASPTU 102 0
PQAEYYIVEDY XYN3_ASPAK 103 0
PLAEYYIVDSW XYNA_BACPU 117 0
PLVEYYIVDSW XYNA_CLOAB 149 0
PLVEYYIVESW XYNA_CLOSR 121 0
PLMEYYIVEGW XYNA_RUMFL 119 0
PLVEYYIMEDN XYN1_TRIRE 123 0
PLVEYYVVENF XYN1_COCCA 112 0
PLIEYYIVESY XYN1_EMENI 118 0
PLVEYYVIESY XYN1_HUMIN 118 0
PLIEYYIVESY XYN2_ASPNG 118 0
PLIEYYIVESY XYN2_EMENI 114 0
PLVEYYILENY XYN2_MAGGR 123 0
PLIEYYIVENF XYN2_TRIRE 115 0
PLIEYYVVDSW XYNA_BACCI 103 0
PLIEYYVVDSW XYNA_BACSU 103 0
ALIEYYVVDSW XYNA_BACST 101 0
SLIEYYIVESY XYNA_SCHCO 84 0
PLIEYYIVESY XYNB_ASPAK 118 0
PLVEYYIVDNW XYNB_STRLI 125 0
PLVEYYIVDNW XYNC_STRLI 131 0
PLVEYYIVDSW XYND_CELFI 123 0
PLIEYYIVENF XYN_TRIHA 83 0
GLHYDRLASE113 Length of motif = 7 Motif number = 3
Glycosyl hydrolase familly 11 motif III - 1
PCODE ST INT
DGSTYQV XYN1_ASPAW 131 17
DGSTYQV XYN1_ASPNG 131 17
DGSTYQV XYN1_ASPTU 130 17
DGSTYQV XYN3_ASPAK 131 17
DGGTYDI XYNA_BACPU 143 15
DGGIYDI XYNA_CLOAB 176 16
MAGTYEI XYNA_CLOSR 149 17
NGNTYDI XYNA_RUMFL 148 18
DGATYTI XYN1_TRIRE 149 15
DGSSYKI XYN1_COCCA 140 17
DGATYDI XYN1_EMENI 146 17
DGDQYDI XYN1_HUMIN 146 17
DGSVYDI XYN2_ASPNG 146 17
DGSTYDI XYN2_EMENI 142 17
AGGTYTL XYN2_MAGGR 151 17
DGSVYDI XYN2_TRIRE 143 17
DGGTYDI XYNA_BACCI 129 15
DGGTYDI XYNA_BACSU 129 15
DGGTYDI XYNA_BACST 128 16
NGATYDI XYNA_SCHCO 112 17
DGSVYDI XYNB_ASPAK 146 17
DGGTYDI XYNB_STRLI 151 15
DGGTYDI XYNC_STRLI 157 15
DGGTYDI XYND_CELFI 149 15
DGSVYDI XYN_TRIHA 111 17
GLHYDRLASE114 Length of motif = 6 Motif number = 4
Glycosyl hydrolase familly 11 motif IV - 1
PCODE ST INT
TSTFTQ XYN1_ASPAW 151 13
TSTFTQ XYN1_ASPNG 151 13
TSTFTQ XYN1_ASPTU 150 13
TSTFTQ XYN3_ASPAK 151 13
IATFKQ XYNA_BACPU 163 13
NTTFKQ XYNA_CLOAB 196 13
TATFQQ XYNA_CLOSR 169 13
TATFPQ XYNA_RUMFL 168 13
TATFNQ XYN1_TRIRE 169 13
TRTFQQ XYN1_COCCA 160 13
TATFEQ XYN1_EMENI 166 13
TRTFQQ XYN1_HUMIN 166 13
TATFTQ XYN2_ASPNG 166 13
TATFTQ XYN2_EMENI 162 13
TRTFQQ XYN2_MAGGR 171 13
TATFYQ XYN2_TRIRE 163 13
RTTFTQ XYNA_BACCI 150 14
RTTFTQ XYNA_BACSU 150 14
TQTFQQ XYNA_BACST 148 13
TQTFEQ XYNA_SCHCO 132 13
TATFSQ XYNB_ASPAK 166 13
TRTFDQ XYNB_STRLI 171 13
TKTFQQ XYNC_STRLI 177 13
SSTFYQ XYND_CELFI 170 14
TATFYQ XYN_TRIHA 131 13
GLHYDRLASE115 Length of motif = 10 Motif number = 5
Glycosyl hydrolase familly 11 motif V - 1
PCODE ST INT
QYFSVRESTR XYN1_ASPAW 156 -1
QYFSVRESTR XYN1_ASPNG 156 -1
QYFSVRESTR XYN1_ASPTU 155 -1
QYFSVRESTR XYN3_ASPAK 156 -1
QYWSVRQTKR XYNA_BACPU 168 -1
QYWSVRRTKR XYNA_CLOAB 201 -1
QYWSVRTSKR XYNA_CLOSR 174 -1
QYWSVRQTSG XYNA_RUMFL 173 -1
QYISVRNSPR XYN1_TRIRE 174 -1
QYWSVRQNKR XYN1_COCCA 165 -1
QFWSVRQSKR XYN1_EMENI 171 -1
QYWSIRKNKR XYN1_HUMIN 171 -1
QYWSVRQNKR XYN2_ASPNG 171 -1
QFWSVRQSKR XYN2_EMENI 167 -1
QYWAIRQQKR XYN2_MAGGR 176 -1
QYWSVRRNHR XYN2_TRIRE 168 -1
QYWSVRQSKR XYNA_BACCI 155 -1
QYWSVRQSKR XYNA_BACSU 155 -1
QFWSVRQSKR XYNA_BACST 153 -1
QFWSVRNPKK XYNA_SCHCO 137 -1
QYWSVRQNKR XYNB_ASPAK 171 -1
QYWSVRQSKR XYNB_STRLI 176 -1
QYWSVRQSKV XYNC_STRLI 182 -1
QYWSVRQQKR XYND_CELFI 175 -1
QYWSVRRNHR XYN_TRIHA 136 -1
GLHYDRLASE116 Length of motif = 9 Motif number = 6
Glycosyl hydrolase familly 11 motif VI - 1
PCODE ST INT
WAQHGFGNS XYN1_ASPAW 179 13
WAQHGFGNS XYN1_ASPNG 179 13
WAHHGFGNS XYN1_ASPTU 178 13
WAQHGFGNS XYN3_ASPAK 179 13
WESLGMPMG XYNA_BACPU 191 13
WESKGMPLG XYNA_CLOAB 224 13
WERMGMRMG XYNA_CLOSR 197 13
WSAAGLDMS XYNA_RUMFL 204 21
WASLGLHLG XYN1_TRIRE 197 13
WASKGMNLG XYN1_COCCA 188 13
WAALGMRLG XYN1_EMENI 194 13
WQQHGMPLG XYN1_HUMIN 194 13
WAKLGMNLG XYN2_ASPNG 194 13
WSQLGMTLG XYN2_EMENI 190 13
WERAGMRMG XYN2_MAGGR 199 13
WAQQGLTLG XYN2_TRIRE 191 13
WKSHGMNLG XYNA_BACCI 181 16
WKSHGMNLG XYNA_BACSU 181 16
WRSKGMNLG XYNA_BACST 179 16
WKGLGMNLG XYNA_SCHCO 165 18
WAKLGMNLG XYNB_ASPAK 194 13
WARAGMPLG XYNB_STRLI 199 13
WARAGMNMG XYNC_STRLI 207 15
WASKGMNLG XYND_CELFI 198 13
WASHGLTLG XYN_TRIHA 159 13
FINAL MOTIF SETS
GLHYDRLASE111 Length of motif = 10 Motif number = 1
Glycosyl hydrolase familly 11 motif I - 4
PCODE ST INT
YLTLYGWTRN Q56265 114 114
YLALYGWTSN XYNB_STRLI 115 115
YLAVYGWTQN XYN1_EMENI 108 108
YLSVYGWTQN XYN2_EMENI 104 104
YLSVYGWTTD XYN2_ASPNG 108 108
YLALYGWSQN O08346 113 113
YLSVYGWTTD XYNB_ASPAK 108 108
YLAVYGWTRN XYN1_COCCA 102 102
YLGVYGWTSN O52779 109 109
YLGVYGWTSN O52780 109 109
YLGVYGWTSN O87118 109 109
YLGVYGWTSN O87119 109 109
YGCLYGWTSN Q56013 122 122
YLTLYGWTAN Q59962 112 112
YLCIYGWSTN P77853 105 105
YLCIYGWSRN O52375 92 92
YLTLYGWTQS XYND_CELFI 113 113
YGCLYGWTSN XYNC_STRLI 121 121
YLAVYGWTRN Q00263 108 108
YLTVYGWTVD Q59257 107 107
YLTLYGWTRN XYNA_BACST 91 91
YLAVYGWTRN O13447 112 112
YLTLYGWTRS Q59254 93 93
YLTLYGWTRS XYNA_BACCI 93 93
YLTLYGWTRS XYNA_BACSU 93 93
YLTFYGWTRN Q43993 92 92
YLAIYGWTQN Q12579 102 102
YLTLYGWTRS Q59256 93 93
YLAVYGWTRN Q00350 112 112
YLAVYGWTRN Q12580 103 103
YLCVYGWTQS XYNA_BACPU 107 107
YLSVYGWSRN Q02244 106 106
YLSVYGWSRN XYN2_TRIRE 105 105
YLSIYGWSRN XYN_TRIHA 73 73
YLSVYGWTIN O74716 99 99
YVSLYGWTQN P87037 104 104
YLSVYGWSRN Q99015 106 106
YLCVYGWTRN XYNA_CLOSR 111 111
YLAVYGWTRN XYN1_HUMIN 108 108
YLCVYGWTSS XYNA_CLOAB 139 139
YMCVYGWTID Q52644 134 134
YLAVYGWTRN XYNA_THELA 104 104
YLALYGWTRS Q59674 103 103
YLALYGWTRS Q59300 102 102
LLSVYGWSTN XYN1_TRIRE 113 113
YLSVYGWTRS XYNA_SCHCO 74 74
YIGIYGWTVD XYNC_FIBSU 396 396
YLSVYGWINS Q12562 101 101
YMCVYGWTRN Q59790 110 110
YMCVYGWTRN XYNA_RUMFL 109 109
YMCIYGWTRN Q52753 111 111
YLCIYGWTQN XYN2_MAGGR 113 113
YMCIYGWTRN XYND_RUMFL 111 111
YLAVYGWVNS Q12549 93 93
YLAVYGWVNY XYN1_ASPAW 93 93
YLAVYGWVNY XYN1_ASPNG 93 93
YLAVYGWVNY XYN3_ASPAK 93 93
YLAVYGWVNY XYN1_ASPTU 93 93
LVALYGWTRG Q00351 99 99
RLCVYGWFQN XYNA_NEOPA 122 122
RLCVYGWFQN Q01421 122 122
RLCVYGWFQN Q92257 123 123
YLAVYGWVNS Q12666 88 88
YVGIYGWTRN XYNA_PIRSP 497 497
YQAIYGWTGQ Q92397 87 87
GLHYDRLASE112 Length of motif = 11 Motif number = 2
Glycosyl hydrolase familly 11 motif II - 4
PCODE ST INT
PLVEYYIVESW Q56265 124 0
PLVEYYIVDNW XYNB_STRLI 125 0
PLIEYYIVESY XYN1_EMENI 118 0
PLIEYYIVESY XYN2_EMENI 114 0
PLIEYYIVESY XYN2_ASPNG 118 0
PLVEYYIVDNW O08346 123 0
PLIEYYIVESY XYNB_ASPAK 118 0
PLVEYYVVENF XYN1_COCCA 112 0
PLVEYYIIESW O52779 119 0
PLVEYYIIESW O52780 119 0
PLVEYYIIESW O87118 119 0
PLVEYYIIESW O87119 119 0
PLVEYYIVDNW Q56013 132 0
PLVEYYIVDNW Q59962 122 0
PLVEFYIVESW P77853 115 0
PLVEFYIVESW O52375 102 0
PLVEYYIVDSW XYND_CELFI 123 0
PLVEYYIVDNW XYNC_STRLI 131 0
PLIEYYVVENF Q00263 118 0
PLVEFYIVDSW Q59257 117 0
ALIEYYVVDSW XYNA_BACST 101 0
PLVEYYVIESY O13447 122 0
PLIEYYVVDSW Q59254 103 0
PLIEYYVVDSW XYNA_BACCI 103 0
PLIEYYVVDSW XYNA_BACSU 103 0
ALIEYYVVDSW Q43993 102 0
PLVEYYIVESF Q12579 112 0
PLIEYYVVDSW Q59256 103 0
PLVEYYVIESY Q00350 122 0
PLIEYYVVENF Q12580 113 0
PLAEYYIVDSW XYNA_BACPU 117 0
PLIEYYIVENF Q02244 116 0
PLIEYYIVENF XYN2_TRIRE 115 0
PLIEYYIVENF XYN_TRIHA 83 0
PLVEYYIVENY O74716 109 0
PLVEYYIVDKY P87037 114 0
PLIEYYIVGNF Q99015 116 0
PLVEYYIVESW XYNA_CLOSR 121 0
PLVEYYVIESY XYN1_HUMIN 118 0
PLVEYYIVDSW XYNA_CLOAB 149 0
PLVEFYIVESW Q52644 144 0
PLVEYYIVENF XYNA_THELA 114 0
PLIEYYVIESY Q59674 113 0
PLIEYYVIESY Q59300 112 0
PLVEYYIMEDN XYN1_TRIRE 123 0
SLIEYYIVESY XYNA_SCHCO 84 0
PLVEYYIVDDW XYNC_FIBSU 406 0
PQAEYYIVESY Q12562 111 0
PLMEYYIVEGW Q59790 120 0
PLMEYYIVEGW XYNA_RUMFL 119 0
PLMEYYIVEGW Q52753 121 0
PLVEYYILENY XYN2_MAGGR 123 0
PLMEYYIVEGW XYND_RUMFL 121 0
PQAEYYIVEDY Q12549 103 0
PQAEYYIVEDY XYN1_ASPAW 103 0
PQAEYYIVEDY XYN1_ASPNG 103 0
PQAEYYIVEDY XYN3_ASPAK 103 0
PQAEYYIVEDY XYN1_ASPTU 103 0
KLVEYYIQDFT Q00351 110 1
PLVEYYIIEDW XYNA_NEOPA 138 6
PLVEYYIIEDW Q01421 138 6
PLVEYYIIEDW Q92257 139 6
PQAEYYVVEAY Q12666 98 0
PLVEFYVVDNW XYNA_PIRSP 507 0
SLSEYYVIDNY Q92397 98 1
GLHYDRLASE113 Length of motif = 7 Motif number = 3
Glycosyl hydrolase familly 11 motif III - 4
PCODE ST INT
DGGTYDI Q56265 150 15
DGGTYDI XYNB_STRLI 151 15
DGATYDI XYN1_EMENI 146 17
DGSTYDI XYN2_EMENI 142 17
DGSVYDI XYN2_ASPNG 146 17
DGGTYDI O08346 149 15
DGSVYDI XYNB_ASPAK 146 17
DGSSYKI XYN1_COCCA 140 17
DGGTYEI O52779 146 16
DGGTYEI O52780 146 16
DGGTYEI O87118 146 16
DGGTYEI O87119 146 16
DGGTYDI Q56013 158 15
DGGTYDV Q59962 148 15
DGGTYDI P77853 142 16
DGATYDI O52375 129 16
DGGTYDI XYND_CELFI 149 15
DGGTYDI XYNC_STRLI 157 15
DGSSYKI Q00263 146 17
DGGTYQI Q59257 144 16
DGGTYDI XYNA_BACST 127 15
DGGTYNV O13447 150 17
DGGTYDI Q59254 129 15
DGGTYDI XYNA_BACCI 129 15
DGGTYDI XYNA_BACSU 129 15
DGGTYDI Q43993 128 15
DGSTYTI Q12579 140 17
DGGTYDI Q59256 129 15
DGGTYNV Q00350 150 17
DGSCYDI Q12580 141 17
DGGTYDI XYNA_BACPU 143 15
DGSVYDI Q02244 144 17
DGSVYDI XYN2_TRIRE 143 17
DGSVYDI XYN_TRIHA 111 17
DGSIYDI O74716 137 17
DGGTYKI P87037 142 17
DGSVYDI Q99015 144 17
MAGTYEI XYNA_CLOSR 149 17
DGDQYDI XYN1_HUMIN 146 17
DGGIYDI XYNA_CLOAB 176 16
DGGTYDI Q52644 172 17
DGSIYRL XYNA_THELA 142 17
DGATYNV Q59674 143 19
DGATYNV Q59300 142 19
DGATYTI XYN1_TRIRE 149 15
NGATYDI XYNA_SCHCO 112 17
DGDTYEI XYNC_FIBSU 435 18
DGATYTV Q12562 143 21
NGNTYDI Q59790 149 18
NGNTYDI XYNA_RUMFL 148 18
DGRTYKI Q52753 151 19
AGGTYTL XYN2_MAGGR 151 17
DGKTYKI XYND_RUMFL 151 19
DGSTYQV Q12549 131 17
DGSTYQV XYN1_ASPAW 131 17
DGSTYQV XYN1_ASPNG 131 17
DGSTYQV XYN3_ASPAK 131 17
DGSTYQV XYN1_ASPTU 131 17
DGSVYDI Q00351 138 17
DGAQYKI XYNA_NEOPA 163 14
DGAQYKI Q01421 163 14
DGAQYKI Q92257 164 14
DGGTYQV Q12666 128 19
DGAKYTV XYNA_PIRSP 538 20
DGSSYQV Q92397 128 19
GLHYDRLASE114 Length of motif = 6 Motif number = 4
Glycosyl hydrolase familly 11 motif IV - 4
PCODE ST INT
TRTFDQ Q56265 170 13
TRTFDQ XYNB_STRLI 171 13
TATFEQ XYN1_EMENI 166 13
TATFTQ XYN2_EMENI 162 13
TATFTQ XYN2_ASPNG 166 13
TKTFNQ O08346 169 13
TATFSQ XYNB_ASPAK 166 13
TRTFQQ XYN1_COCCA 160 13
TATFQQ O52779 166 13
TATFQQ O52780 166 13
TATFQQ O87118 166 13
TATFQQ O87119 166 13
TRTFDQ Q56013 178 13
TKTFNQ Q59962 168 13
TATFDQ P77853 162 13
TRTFDQ O52375 149 13
SSTFYQ XYND_CELFI 170 14
TKTFQQ XYNC_STRLI 177 13
TQTFQQ Q00263 166 13
TATFQQ Q59257 164 13
TQTFQQ XYNA_BACST 147 13
TRTFQQ O13447 170 13
RTTFTQ Q59254 150 14
RTTFTQ XYNA_BACCI 150 14
RTTFTQ XYNA_BACSU 150 14
TQTFPQ Q43993 148 13
TSTFDQ Q12579 160 13
RTTFTQ Q59256 150 14
TRTFQQ Q00350 170 13
TSTFYQ Q12580 161 13
IATFKQ XYNA_BACPU 163 13
TATFYQ Q02244 164 13
TATFYQ XYN2_TRIRE 163 13
TATFYQ XYN_TRIHA 131 13
TNTFHQ O74716 157 13
TSTFNQ P87037 162 13
TATFYQ Q99015 164 13
TATFQQ XYNA_CLOSR 169 13
TRTFQQ XYN1_HUMIN 166 13
NTTFKQ XYNA_CLOAB 196 13
TKTFDQ Q52644 192 13
TQTFDQ XYNA_THELA 162 13
TQTFYQ Q59674 163 13
TQTFYQ Q59300 162 13
TATFNQ XYN1_TRIRE 169 13
TQTFEQ XYNA_SCHCO 132 13
TQTFPQ XYNC_FIBSU 455 13
TSTFKQ Q12562 163 13
TATFPQ Q59790 169 13
TATFPQ XYNA_RUMFL 168 13
TKTFPQ Q52753 171 13
TRTFQQ XYN2_MAGGR 171 13
TKTFPQ XYND_RUMFL 171 13
TSTFTQ Q12549 151 13
TSTFTQ XYN1_ASPAW 151 13
TSTFTQ XYN1_ASPNG 151 13
TSTFTQ XYN3_ASPAK 151 13
TSTFTQ XYN1_ASPTU 151 13
TTTFVQ Q00351 158 13
SETFKQ XYNA_NEOPA 183 13
SETFKQ Q01421 183 13
NETFKQ Q92257 184 13
TSTFTQ Q12666 148 13
NTTFKQ XYNA_PIRSP 557 12
TTTFPQ Q92397 148 13
GLHYDRLASE115 Length of motif = 10 Motif number = 5
Glycosyl hydrolase familly 11 motif V - 4
PCODE ST INT
QYWSVRQSKR Q56265 175 -1
QYWSVRQSKR XYNB_STRLI 176 -1
QFWSVRQSKR XYN1_EMENI 171 -1
QFWSVRQSKR XYN2_EMENI 167 -1
QYWSVRQNKR XYN2_ASPNG 171 -1
QYWSVRQNKR O08346 174 -1
QYWSVRQNKR XYNB_ASPAK 171 -1
QYWSVRQNKR XYN1_COCCA 165 -1
QYWSVRTSKR O52779 171 -1
QYWSVRTSKR O52780 171 -1
QYWSVRTSKR O87118 171 -1
QYWSVRTSKR O87119 171 -1
QYWSVRQSKV Q56013 183 -1
QYWSVRQSKR Q59962 173 -1
QYWSVRTSKR P77853 167 -1
QYWSVRTSKR O52375 154 -1
QYWSVRQQKR XYND_CELFI 175 -1
QYWSVRQSKV XYNC_STRLI 182 -1
QYWSVRQNKR Q00263 171 -1
QYWSVRTSKR Q59257 169 -1
QFWSVRQSKR XYNA_BACST 152 -1
QYWSVRQQKR O13447 175 -1
QYWSVRQSKR Q59254 155 -1
QYWSVRQSKR XYNA_BACCI 155 -1
QYWSVRQSKR XYNA_BACSU 155 -1
QYWSVRQSKR Q43993 153 -1
QFWSVRQNHR Q12579 165 -1
QYWSVRQTKR Q59256 155 -1
QYWSVRTQKR Q00350 175 -1
QFWSVRQNKR Q12580 166 -1
QYWSVRQTKR XYNA_BACPU 168 -1
QYWSVRRNHR Q02244 169 -1
QYWSVRRNHR XYN2_TRIRE 168 -1
QYWSVRRNHR XYN_TRIHA 136 -1
QYWSIRRNKR O74716 162 -1
QYWSVRQSGR P87037 167 -1
QYWSVRRNHR Q99015 169 -1
QYWSVRTSKR XYNA_CLOSR 174 -1
QYWSIRKNKR XYN1_HUMIN 171 -1
QYWSVRRTKR XYNA_CLOAB 201 -1
QYWSVRQDKP Q52644 197 -1
QYWSVRQDKR XYNA_THELA 167 -1
QYFSVRNPKK Q59674 168 -1
QYFSVRSPKK Q59300 167 -1
QYISVRNSPR XYN1_TRIRE 174 -1
QFWSVRNPKK XYNA_SCHCO 137 -1
QYFSVRKSAR XYNC_FIBSU 460 -1
QYWSVRQTKR Q12562 168 -1
QYWSVRQKSG Q59790 174 -1
QYWSVRQTSG XYNA_RUMFL 173 -1
QYWSVRTSSG Q52753 176 -1
QYWAIRQQKR XYN2_MAGGR 176 -1
QYWSVRTTSG XYND_RUMFL 176 -1
QYFSVRESTR Q12549 156 -1
QYFSVRESTR XYN1_ASPAW 156 -1
QYFSVRESTR XYN1_ASPNG 156 -1
QYFSVRESTR XYN3_ASPAK 156 -1
QYFSVRESTR XYN1_ASPTU 156 -1
QYISNRVSKR Q00351 163 -1
QYFSVRQQKR XYNA_NEOPA 188 -1
QYFSVRQQKR Q01421 188 -1
QYFSVRQQKR Q92257 189 -1
QFFSVRQGSR Q12666 153 -1
QYFSIRQQAR XYNA_PIRSP 562 -1
QYFSVRQNKR Q92397 153 -1
GLHYDRLASE116 Length of motif = 9 Motif number = 6
Glycosyl hydrolase familly 11 motif VI - 4
PCODE ST INT
WARHGMHLG Q56265 198 13
WARAGMPLG XYNB_STRLI 199 13
WAALGMRLG XYN1_EMENI 194 13
WSQLGMTLG XYN2_EMENI 190 13
WAKLGMNLG XYN2_ASPNG 194 13
WAAHGMPLG O08346 197 13
WAKLGMNLG XYNB_ASPAK 194 13
WASKGMNLG XYN1_COCCA 188 13
WERLGMKMG O52779 194 13
WERLGMKMG O52780 194 13
WERLGMKMG O87118 194 13
WERLGMKMG O87119 194 13
WARAGMNLG Q56013 207 14
WARYGMPLG Q59962 196 13
WANRGLNLG P77853 190 13
WAAKGLNLG O52375 177 13
WASKGMNLG XYND_CELFI 198 13
WARAGMNMG XYNC_STRLI 207 15
WAAKGMKLG Q00263 194 13
WESLGMNMG Q59257 192 13
WRSKGMNLG XYNA_BACST 178 16
WSRYGLNLG O13447 198 13
WKSHGMNLG Q59254 181 16
WKSHGMNLG XYNA_BACCI 181 16
WKSHGMNLG XYNA_BACSU 181 16
WPSKGMYLG Q43993 179 16
WAQAGLKLG Q12579 188 13
WKSHGMNLG Q59256 181 16
WSRYGLNLG Q00350 198 13
WAAAGLQLG Q12580 189 13
WESLGMPMG XYNA_BACPU 191 13
WAQQGLTLG Q02244 192 13
WAQQGLTLG XYN2_TRIRE 191 13
WASHGLTLG XYN_TRIHA 159 13
WRSLGMPLG O74716 185 13
WANVGLQLG P87037 190 13
WAQQGLTLG Q99015 192 13
WERMGMRMG XYNA_CLOSR 197 13
WQQHGMPLG XYN1_HUMIN 194 13
WESKGMPLG XYNA_CLOAB 224 13
WEQVGLTLG Q52644 226 19
WARAGLNVN XYNA_THELA 190 13
WASKGLNLG Q59674 195 17
WASKGLNLG Q59300 194 17
WASLGLHLG XYN1_TRIRE 197 13
WKGLGMNLG XYNA_SCHCO 165 18
WEELGMKMG XYNC_FIBSU 483 13
WAKYGFGNS Q12562 191 13
WSKAGLDMS Q59790 205 21
WSAAGLDMS XYNA_RUMFL 204 21
WSKAGLDMS Q52753 207 21
WERAGMRMG XYN2_MAGGR 199 13
WSKAGLDMS XYND_RUMFL 207 21
WAQHGFGNS Q12549 179 13
WAQHGFGNS XYN1_ASPAW 179 13
WAQHGFGNS XYN1_ASPNG 179 13
WAQHGFGNS XYN3_ASPAK 179 13
WAHHGFGNS XYN1_ASPTU 179 13
WAKLGMNLG Q00351 187 14
WAKQGWGIG XYNA_NEOPA 211 13
WAKQGWGIG Q01421 211 13
WSNQGWGIG Q92257 212 13
WANDGFGNS Q12666 176 13
WEKLGMRMG XYNA_PIRSP 585 13
WAQHGFPNR Q92397 176 13
User query: Display/Full Code "GLHYDRLASE11"