WORKLIST ENTRIES (1):
GABAARECEPTR View alignment Gamma-aminobutyric acid A (GABAA) receptor signature
Type of fingerprint: COMPOUND with 4 elements
Links:
PRINTS; PR00254 NICOTINICR; PR00252 NRIONCHANNEL
PRINTS; PR01079 GABAARALPHA; PR01160 GABAARBETA; PR01620 GABAARGAMMA
PRINTS; PR01670 GABAARRHO
INTERPRO; IPR000188
Creation date 04-FEB-1995; UPDATE 28-JUL-1999
1. KOFUJI, P., WANG, J.B., MOSS, S.J., HUGANIR, R.L. AND BURT, D.R.
Generation of two forms of the gamma-aminobutyric acid A receptor gamma
2-subunit in mice by alternative splicing.
J.NEUROCHEM. 56 713-715 (1991).
2. WANG, J.B., KOFUJI, P., FERNANDO, J.C., MOSS, S.J., HUGANIR, R.L.
AND BURT, D.R.
The alpha 1, alpha 2, and alpha 3 subunits of GABAA receptors: comparison
in seizure-prone and -resistant mice and during development.
J.MOL.NEUROSCI. 3 177-184 (1992).
3. LEVITAN, E.S., SCHOFIELD, P.R., BURT, D.R., RHEE, L.M., WISDEN, W.,
KOHLER, M., FUJITA, N., RODRIGUEZ, H.F., STEPHENSON, A., DARLISON, M.G.,
BARNARD, E.A. AND SEEBURG, P.H.
Structural and functional basis for GABAA receptor heterogeneity.
NATURE 335 76-79 (1988).
4. KHRESTCHATISKY, M., MACLENNAN, A.J., TILLAKARATNE, N.J., CHIANG, M.Y.
AND TOBIN, A.J.
Sequence and regional distribution of the mRNA encoding the alpha 2
polypeptide of rat gamma-aminobutyric acid A receptors.
J.NEUROCHEM. 56 1717-1722 (1991).
5. THOMPSON, M., SHOTKOSKI, F. AND FFRENCH-CONSTANT, R.
Cloning and sequencing of the cyclodiene insecticide resistance gene from
the yellow fever mosquito Aedes aegypti. Conservation of the gene and
resistance associated mutation with Drosophila.
FEBS LETT. 325(3) 187-190 (1993).
Gamma-aminobutyric acid (GABA) receptors are members of the neurotransmitter
ligand-gated ion channels: they mediate neuronal inhibition by opening
chloride channels on binding GABA [1,2]. There are 5 classes of receptor
subunit (alpha, beta, gamma, delta and rho), with variants in each class
[3]. Each subunit contains 4 proposed transmembrane (TM) domains, with a
large intracellular loop between the third and fourth domain. Active
receptors contain 5 subunits of varying classes and variants - the use
of highly similar receptor subtypes, which differ in functionality, is a
common feature of brain receptors [3].
The neurotransmitter action of the subtype A receptor (GABAA) is
potentiated by both benzodiazepines and barbiturates [3]. Alpha subunits
largely determine benzodiazepine binding properties [4], and gamma-2
subunits appear to be essential for benzodiazepine modulation of receptor
function [1]. In insects, cyclodiene (an insecticide) resistence is due to
insensitivity of the cyclodiene/picrotoxinin binding site on the GABAA
receptor-chloride ionophore complex [5].
GABAARECEPTR is a 4-element fingerprint that provides a signature for GABAA
receptors. The fingerprint was derived from an initial alignment of 15
sequences: the motifs were drawn from the 4 putative TM regions. Two
iterations on OWL24.0 were required to reach convergence, at which point a
true set comprising 60 sequences was identified: these include a number of
glycine receptors, which are inhibitory chloride ion channels known to
share a high degree of similarity with the GABA receptors.
An update on SPTR37_9f identified a true set of 113 sequences, and 10
partial matches.
SUMMARY INFORMATION
113 codes involving 4 elements
6 codes involving 3 elements
4 codes involving 2 elements
COMPOSITE FINGERPRINT INDEX
4| 113 113 113 113
3| 5 6 6 1
2| 3 2 2 1
--+---------------------
| 1 2 3 4
True positives..
GRA3_HUMAN GRA3_RAT O75816 GRA2_RAT
GRA2_HUMAN GAA6_CHICK GAA6_HUMAN GAA6_MOUSE
GAA6_RAT GAA3_MOUSE GAA3_HUMAN O93430
Q90288 GAA3_BOVIN GAA3_RAT GAA5_HUMAN
GAA2_RAT GAA2_MOUSE GAA2_HUMAN GAA2_BOVIN
GAA1_MOUSE GAA1_HUMAN GAA1_CHICK GAA1_BOVIN
GAA5_RAT GAA4_BOVIN GAA4_HUMAN GAA4_RAT
GAC3_HUMAN GRA1_RAT GRA1_MOUSE GRA1_HUMAN
GAC1_RAT GAC3_MOUSE GAC3_RAT GAC4_CHICK
O18468 Q16896 GAB3_MOUSE GAB3_HUMAN
GAB4_CHICK GAC2_RAT GAC2_MOUSE GAC2_HUMAN
GAC2_CHICK GAC2_BOVIN O17145 GAB_DROME
P92138 Q24561 GAB3_DROME GAB1_BOVIN
GAB1_RAT GAB1_MOUSE GAB1_HUMAN Q16323
GAB2_MOUSE GAB2_HUMAN Q94900 O77295
O76773 GAB3_CHICK GAB_LYMST O17547
P92023 O17548 Q17367 O42157
GAR1_HUMAN GAR1_MOUSE GAR1_RAT GAR2_HUMAN
GAR3_RAT Q17369 O01436 GAD_MOUSE
GAD_RAT GAD_HUMAN Q22637 O46124
O17793 Q17327 GAR2_MOUSE GAR2_RAT
Q08861 GAAP_HUMAN GAAP_RAT Q19358
GAE_HUMAN O15346 Q99520 GBR4_CAEEL
Q17328 P91730 Q24352 O17555
Q25035 GRB_HUMAN GRB_MOUSE GRB_RAT
Q23002 Q21420 Q21005 Q22658
O18146 Q18812 O17041 O17402
YO99_CAEEL O44917 Q20105 Q19146
P90876
Subfamily: Codes involving 3 elements
Subfamily True positives..
O46123 O18276 Q20828 Q18518
Q22741 Q10052
Subfamily: Codes involving 2 elements
Subfamily True positives..
P91985 O01792 O17274 ACH9_RAT
PROTEIN TITLES
GRA3_HUMAN GLYCINE RECEPTOR ALPHA-3 CHAIN PRECURSOR - HOMO SAPIENS (HUM
GRA3_RAT GLYCINE RECEPTOR ALPHA-3 CHAIN PRECURSOR - RATTUS NORVEGICUS
O75816 GLYCINE RECEPTOR ALPHA 3 SUBUNIT - HOMO SAPIENS (HUMAN).
GRA2_RAT GLYCINE RECEPTOR ALPHA-2* CHAIN PRECURSOR (NEONATAL ISOFORM)
GRA2_HUMAN GLYCINE RECEPTOR ALPHA-2 CHAIN PRECURSOR - HOMO SAPIENS (HUM
GAA6_CHICK GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-6 SUBUNIT PRECURSOR (
GAA6_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-6 SUBUNIT PRECURSOR (
GAA6_MOUSE GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-6 SUBUNIT PRECURSOR (
GAA6_RAT GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-6 SUBUNIT PRECURSOR (
GAA3_MOUSE GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-3 SUBUNIT PRECURSOR (
GAA3_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-3 SUBUNIT PRECURSOR (
O93430 GLYCINE RECEPTOR, ALPHAZ1 SUBUNIT - BRACHYDANIO RERIO (ZEBRA
Q90288 NEUROTRANSMITTER RECEPTOR ALPHA SUBUNIT PRECURSOR - CARASSIU
GAA3_BOVIN GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-3 SUBUNIT PRECURSOR (
GAA3_RAT GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-3 SUBUNIT PRECURSOR (
GAA5_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-5 SUBUNIT PRECURSOR (
GAA2_RAT GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-2 SUBUNIT PRECURSOR (
GAA2_MOUSE GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-2 SUBUNIT PRECURSOR (
GAA2_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-2 SUBUNIT PRECURSOR (
GAA2_BOVIN GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-2 SUBUNIT PRECURSOR (
GAA1_MOUSE GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-1 SUBUNIT PRECURSOR (
GAA1_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-1 SUBUNIT PRECURSOR (
GAA1_CHICK GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-1 SUBUNIT PRECURSOR (
GAA1_BOVIN GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-1 SUBUNIT PRECURSOR (
GAA5_RAT GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-5 SUBUNIT PRECURSOR (
GAA4_BOVIN GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-4 SUBUNIT PRECURSOR (
GAA4_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-4 SUBUNIT PRECURSOR (
GAA4_RAT GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-4 SUBUNIT PRECURSOR (
GAC3_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR GAMMA-3 SUBUNIT PRECURSOR (
GRA1_RAT GLYCINE RECEPTOR ALPHA-1 CHAIN PRECURSOR (48 KD) (STRYCHNINE
GRA1_MOUSE GLYCINE RECEPTOR ALPHA-1 CHAIN PRECURSOR (48 KD) (STRYCHNINE
GRA1_HUMAN GLYCINE RECEPTOR ALPHA-1 CHAIN PRECURSOR (48 KD) (STRYCHNINE
GAC1_RAT GAMMA-AMINOBUTYRIC-ACID RECEPTOR GAMMA-1 SUBUNIT PRECURSOR (
GAC3_MOUSE GAMMA-AMINOBUTYRIC-ACID RECEPTOR GAMMA-3 SUBUNIT PRECURSOR (
GAC3_RAT GAMMA-AMINOBUTYRIC-ACID RECEPTOR GAMMA-3 SUBUNIT PRECURSOR (
GAC4_CHICK GAMMA-AMINOBUTYRIC-ACID RECEPTOR GAMMA-4 SUBUNIT PRECURSOR (
O18468 GABA-GATED CHLORIDE CHANNEL ISOFORM A2 - HELIOTHIS VIRESCENS
Q16896 GABA RECEPTOR SUBUNIT - AEDES AEGYPTI (YELLOWFEVER MOSQUITO)
GAB3_MOUSE GAMMA-AMINOBUTYRIC-ACID RECEPTOR BETA-3 SUBUNIT PRECURSOR (G
GAB3_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR BETA-3 SUBUNIT PRECURSOR (G
GAB4_CHICK GAMMA-AMINOBUTYRIC-ACID RECEPTOR BETA-4 SUBUNIT PRECURSOR (G
GAC2_RAT GAMMA-AMINOBUTYRIC-ACID RECEPTOR GAMMA-2 SUBUNIT PRECURSOR (
GAC2_MOUSE GAMMA-AMINOBUTYRIC-ACID RECEPTOR GAMMA-2 SUBUNIT PRECURSOR (
GAC2_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR GAMMA-2 SUBUNIT PRECURSOR (
GAC2_CHICK GAMMA-AMINOBUTYRIC-ACID RECEPTOR GAMMA-2 SUBUNIT PRECURSOR (
GAC2_BOVIN GAMMA-AMINOBUTYRIC-ACID RECEPTOR GAMMA-2 SUBUNIT PRECURSOR (
O17145 GAMMA-AMINOBUTYRIC ACID RECEPTOR SUBUNIT - LUCILIA CUPRINA (
GAB_DROME GAMMA-AMINOBUTYRIC-ACID RECEPTOR BETA SUBUNIT PRECURSOR (GAB
P92138 GABA-A RECEPTOR (GAMMA-AMINOBUTYRIC ACID RECEPTOR) - DROSOPH
Q24561 GABA RECEPTOR - DROSOPHILA MELANOGASTER (FRUIT FLY).
GAB3_DROME GAMMA-AMINOBUTYRIC-ACID RECEPTOR BETA-LIKE SUBUNIT PRECURSOR
GAB1_BOVIN GAMMA-AMINOBUTYRIC-ACID RECEPTOR BETA-1 SUBUNIT PRECURSOR (G
GAB1_RAT GAMMA-AMINOBUTYRIC-ACID RECEPTOR BETA-1 SUBUNIT PRECURSOR (G
GAB1_MOUSE GAMMA-AMINOBUTYRIC-ACID RECEPTOR BETA-1 SUBUNIT PRECURSOR (G
GAB1_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR BETA-1 SUBUNIT PRECURSOR (G
Q16323 GABAA RECEPTOR BETA 2 SUBUNIT - HOMO SAPIENS (HUMAN).
GAB2_MOUSE GAMMA-AMINOBUTYRIC-ACID RECEPTOR BETA-2 SUBUNIT PRECURSOR (G
GAB2_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR BETA-2 SUBUNIT PRECURSOR (G
Q94900 GLUTAMATE-GATED CHLORIDE CHANNEL - DROSOPHILA MELANOGASTER (
O77295 DROSGLUCL - DROSOPHILA MELANOGASTER (FRUIT FLY).
O76773 GLUTAMATE GATED CHLORIDE CHANNEL - LUCILIA CUPRINA (GREENBOT
GAB3_CHICK GAMMA-AMINOBUTYRIC-ACID RECEPTOR BETA-3 SUBUNIT PRECURSOR (G
GAB_LYMST GAMMA-AMINOBUTYRIC-ACID RECEPTOR BETA SUBUNIT PRECURSOR (GAB
O17547 GLUCLALPHA2A PROTEIN - CAENORHABDITIS ELEGANS.
P92023 T10G3.7 PROTEIN - CAENORHABDITIS ELEGANS.
O17548 GLUCLALPHA2B PROTEIN PRECURSOR - CAENORHABDITIS ELEGANS.
Q17367 INHIBITORY AMINO ACID RECEPTOR SUBUNIT CEGBR2 PRECURSOR - CA
O42157 GABAC RECEPTOR SUBUNIT RHO-1B - MORONE AMERICANA (WHITE PERC
GAR1_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR RHO-1 SUBUNIT PRECURSOR (GA
GAR1_MOUSE GAMMA-AMINOBUTYRIC-ACID RECEPTOR RHO-1 SUBUNIT PRECURSOR (GA
GAR1_RAT GAMMA-AMINOBUTYRIC-ACID RECEPTOR RHO-1 SUBUNIT PRECURSOR (GA
GAR2_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR RHO-2 SUBUNIT PRECURSOR (GA
GAR3_RAT GAMMA-AMINOBUTYRIC-ACID RECEPTOR RHO-3 SUBUNIT PRECURSOR (GA
Q17369 INHIBITORY AMINO ACID RECEPTOR SUBUNIT CEGBR3 PRECURSOR - CA
O01436 SIMILAR TO LIGAND-GATED IONIC CHANNEL - CAENORHABDITIS ELEGA
GAD_MOUSE GAMMA-AMINOBUTYRIC-ACID RECEPTOR DELTA SUBUNIT PRECURSOR (GA
GAD_RAT GAMMA-AMINOBUTYRIC-ACID RECEPTOR DELTA SUBUNIT PRECURSOR (GA
GAD_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR DELTA SUBUNIT PRECURSOR (GA
Q22637 T21C12.1 PROTEIN - CAENORHABDITIS ELEGANS.
O46124 GBR-2B PROTEIN PRECURSOR - HAEMONCHUS CONTORTUS.
O17793 F11A5.10 PROTEIN - CAENORHABDITIS ELEGANS.
Q17327 AVERMECTIN-SENSITIVE GLUTAMATE-GATED CHLORIDE CHANNEL GLUCL
GAR2_MOUSE GAMMA-AMINOBUTYRIC-ACID RECEPTOR RHO-2 SUBUNIT PRECURSOR (GA
GAR2_RAT GAMMA-AMINOBUTYRIC-ACID RECEPTOR RHO-2 SUBUNIT PRECURSOR (GA
Q08861 GAMMA-AMINOBUTYRIC ACID-GATED CHLORIDE-ION CHANNEL/RECEPTOR,
GAAP_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR PI SUBUNIT PRECURSOR (GABA(
GAAP_RAT GAMMA-AMINOBUTYRIC-ACID RECEPTOR PI SUBUNIT PRECURSOR (GABA(
Q19358 SIMILAR TO GAMMA-AMINOBUTYRIC ACID - CAENORHABDITIS ELEGANS.
GAE_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR EPSILON SUBUNIT PRECURSOR (
O15346 GABA RECEPTOR EPSILON SUBUNIT - HOMO SAPIENS (HUMAN).
Q99520 PUTATIVE GABA-GATED CHLORIDE CHANNEL - HOMO SAPIENS (HUMAN).
GBR4_CAEEL GLYCINE RECEPTOR BETA-TYPE CHAIN 4 - CAENORHABDITIS ELEGANS.
Q17328 AVERMECTIN-SENSITIVE GLUTAMATE-GATED CHLORIDE CHANNEL GLUCL
P91730 GLUTAMATE GATED CHLORIDE CHANNEL BETA SUBUNIT PRECURSOR - HA
Q24352 GRD MRNA - DROSOPHILA MELANOGASTER (FRUIT FLY).
O17555 ZC482.5 PROTEIN - CAENORHABDITIS ELEGANS.
Q25035 GABA A/GLYCINE RECEPTOR SUBUNIT - HAEMONCHUS CONTORTUS.
GRB_HUMAN GLYCINE RECEPTOR BETA CHAIN PRECURSOR - HOMO SAPIENS (HUMAN)
GRB_MOUSE GLYCINE RECEPTOR BETA CHAIN PRECURSOR - MUS MUSCULUS (MOUSE)
GRB_RAT GLYCINE RECEPTOR BETA CHAIN PRECURSOR (58 KD) - RATTUS NORVE
Q23002 SIMILAR TO LIGAND-GATED IONIC CHANNEL PROTEIN - CAENORHABDIT
Q21420 K10D6.1 PROTEIN - CAENORHABDITIS ELEGANS.
Q21005 F58G6.4 PROTEIN - CAENORHABDITIS ELEGANS.
Q22658 COSMID T21F2 - CAENORHABDITIS ELEGANS.
O18146 T27E9.9.
Q18812 C53D6.3 PROTEIN - CAENORHABDITIS ELEGANS.
O17041 T15B7.16 PROTEIN - CAENORHABDITIS ELEGANS.
O17402 F09G2.5 PROTEIN - CAENORHABDITIS ELEGANS.
YO99_CAEEL HYPOTHETICAL GLYCINE RECEPTOR LIKE PROTEIN T20B12.9 IN CHROM
O44917 SIMILAR TO LIGAND-GATED IONIC CHANNEL PROTEINS - CAENORHABDI
Q20105 F47A4.1 PROTEIN - CAENORHABDITIS ELEGANS.
Q19146 T19B10.10 PROTEIN - CAENORHABDITIS ELEGANS.
P90876 F46F3.2 PROTEIN - CAENORHABDITIS ELEGANS.
O46123 GBR-2A PROTEIN PRECURSOR - HAEMONCHUS CONTORTUS.
O18276 ZC482.1 PROTEIN - CAENORHABDITIS ELEGANS.
Q20828 COSMID F55D10 - CAENORHABDITIS ELEGANS.
Q18518 C39B10.2 PROTEIN - CAENORHABDITIS ELEGANS.
Q22741 SIMILAR TO GAMMA-AMINOBUTYRIC-ACID RECEPTOR. NCBI GI: 106553
Q10052 HYPOTHETICAL GLYCINE RECEPTOR LIKE PROTEIN F09C12.1 IN CHROM
P91985 C50B6.11 PROTEIN - CAENORHABDITIS ELEGANS.
O01792 SIMILAR TO LIGAND-GATED IONIC CHANNEL - CAENORHABDITIS ELEGA
O17274 T27A1.4 PROTEIN - CAENORHABDITIS ELEGANS.
ACH9_RAT NEURONAL ACETYLCHOLINE RECEPTOR PROTEIN, ALPHA-9 CHAIN PRECU
SCAN HISTORY
OWL24_0 2 100 NSINGLE
OWL25_1 1 100 NSINGLE
SPTR37_9f 3 140 NSINGLE
INITIAL MOTIF SETS
GABAARECEPTR1 Length of motif = 21 Motif number = 1
GABAA receptor motif I - 1
PCODE ST INT
FVIQTYLPCIMTVILSQVSFW GAA1_BOVIN 253 253
FVIQTYLPCIMTVILSQVSFW GAA2_MOUSE 253 253
FVIQTYLPCIMTVILSQVSFW GAA3_HUMAN 278 278
FMIQTYIPCIMTVILSQVSFW GAA4_BOVIN 259 259
FVIQTYLPCIMTVILSQVSFW GAA5_RAT 260 260
FTIQTYIPCILTVVLSWVSFW GAC3_MOUSE 256 256
FAIQTYIPCILTVVLSWVSFW GAC4_CHICK 258 258
FMIQIYTPCIMTVILSQVSFW GAA6_MOUSE 233 233
FMIQIYTPCIMTVILSQVSFW GAA6_RAT 243 243
FTIQTYIPCTLIVVLSWVSFW GAC2_BOVIN 275 275
FILQTYMPSILITILSWVSFW GAB2_RAT 245 245
FILQTYMPSILITILSWVSFW GAB3_CHICK 246 246
FILQTYMPSILITILSWVSFW GAB4_CHICK 245 245
FILQTYMPSTLITILSWVSFW GAB1_HUMAN 246 246
YLIQIYIPSGLIVVISWVSFW GAB_DROME 270 270
GABAARECEPTR2 Length of motif = 22 Motif number = 2
GABAA receptor motif II - 1
PCODE ST INT
VPARTVFGVTTVLTMTTLSISA GAA1_BOVIN 279 5
VPARTVFGVTTVLTMTTLSISA GAA2_MOUSE 279 5
VPARTVFGVTTVLTMTTLSISA GAA3_HUMAN 304 5
VPARTVFGITTVLTMTTLSISA GAA4_BOVIN 285 5
VPARTVFGVTTVLTMTTLSISA GAA5_RAT 286 5
TPARTTLGITTVLTMTTLSTIA GAC3_MOUSE 282 5
TPARTSLGITTVLTMTTLSTIS GAC4_CHICK 284 5
VPARTVFGITTVLTMTTLSISA GAA6_MOUSE 259 5
VPARTVFGITTVLTMTTLSISA GAA6_RAT 269 5
VPARTSLGITTVLTMTTLSTIA GAC2_BOVIN 301 5
SAARVALGITTVLTMTTINTHL GAB2_RAT 271 5
SAARVALGITTVLTMTTINTHL GAB3_CHICK 272 5
SAARVALGVTTVLTMTTINTHL GAB4_CHICK 271 5
SAARVALGITTVLTMTTISTHL GAB1_HUMAN 272 5
TPARVALGVTTVLTMTTLMSST GAB_DROME 296 5
GABAARECEPTR3 Length of motif = 22 Motif number = 3
GABAA receptor motif III - 1
PCODE ST INT
MDWFIAVCYAFVFSALIEFATV GAA1_BOVIN 313 12
MDWFIAVCYAFVFSALIEFATV GAA2_MOUSE 313 12
MDWFIAVCYAFVFSALIEFATV GAA3_HUMAN 338 12
MDWFIAVCFAFVFSALIEFAAV GAA4_BOVIN 320 13
MDWFIAVCYAFVFSALIEFATV GAA5_RAT 320 12
MDLFVTVCFLFVFAALMEYATL GAC3_MOUSE 316 12
MDLFVSVCFIFVFAALMEYATL GAC4_CHICK 318 12
MDWFIAVCFAFVFSALIEFAAV GAA6_MOUSE 293 12
MDWFIAVCFAFVFSALIEFAAV GAA6_RAT 303 12
MDLFVSVCFIFVFSALVEYGTL GAC2_BOVIN 335 12
IDMYLMGCFVFVFMALLEYALV GAB2_RAT 305 12
IDMYLMGCFVFVFLALLEYAFV GAB3_CHICK 306 12
IDVYLMGCFVFVFLALLEYAFV GAB4_CHICK 305 12
IDIYLMGCFVFVFLALLEYAFV GAB1_HUMAN 306 12
IDVYLGTCFVMVFASLLEYATV GAB_DROME 330 12
GABAARECEPTR4 Length of motif = 21 Motif number = 4
GABAA receptor motif IV - 1
PCODE ST INT
LSRIAFPLLFGIFNLVYWATY GAA1_BOVIN 422 87
MSRIVFPVLFGTFNLVYWATY GAA2_MOUSE 420 85
ISRIIFPVLFAIFNLVYWATY GAA3_HUMAN 458 98
YARILFPVTFGAFNMVYWVVY GAA4_BOVIN 523 181
MSRIVFPILFGTFNLVYWATY GAA5_RAT 430 88
YSRVFFPTSFLLFNLVYWVGY GAC3_MOUSE 444 106
YSRVFFPTAFLLFNIVYWIAY GAC4_CHICK 434 94
YSRILFPVAFAGFNLVYWIVY GAA6_MOUSE 410 95
YSRILFPVAFAGFNLVYWIVY GAA6_RAT 420 95
YARIFFPTAFCLFNLVYWVSY GAC2_BOVIN 452 95
WSRIFFPVVFSFFNIVYWLYY GAB2_RAT 452 125
WSRMVFPFTFSLFNLIYWLYY GAB3_CHICK 454 126
WSRIIFPITFGFFNLVYWLYY GAB4_CHICK 466 139
WSRMFFPITFSLFNVVYWLYY GAB1_HUMAN 452 124
YSRIVFPVCFVCFNLMYWIIY GAB_DROME 569 217
FINAL MOTIF SETS
GABAARECEPTR1 Length of motif = 21 Motif number = 1
GABAA receptor motif I - 3
PCODE ST INT
YLIQMYIPSLLIVILSWVSFW GRA3_HUMAN 256 256
YLIQMYIPSLLIVILSWVSFW GRA3_RAT 256 256
YLIQMYIPSLLIVILSWVSFW O75816 256 256
YLIQMYIPSLLIVILSWVSFW GRA2_RAT 257 257
YLIQMYIPSLLIVILSWVSFW GRA2_HUMAN 257 257
FMIQIYTPCIMTVILSQVSFW GAA6_CHICK 243 243
FMIQIYTPCIMTVILSQVSFW GAA6_HUMAN 243 243
FMIQIYTPCIMTVILSQVSFW GAA6_MOUSE 233 233
FMIQIYTPCIMTVILSQVSFW GAA6_RAT 243 243
FVIQTYLPCIMTVILSQVSFW GAA3_MOUSE 278 278
FVIQTYLPCIMTVILSQVSFW GAA3_HUMAN 278 278
YLIQMYIPSLLIVILSWVSFW O93430 247 247
FLIQTYIPCIMTVILAQVSFW Q90288 242 242
FVIQTYLPCIMTVILSQVSFW GAA3_BOVIN 278 278
FVIQTYLPCIMTVILSQVSFW GAA3_RAT 278 278
FVIQTYLPCIMTVILSQVSFW GAA5_HUMAN 260 260
FVIQTYLPCIMTVILSQVSFW GAA2_RAT 253 253
FVIQTYLPCIMTVILSQVSFW GAA2_MOUSE 253 253
FVIQTYLPCIMTVILSQVSFW GAA2_HUMAN 253 253
FVIQTYLPCIMTVILSQVSFW GAA2_BOVIN 253 253
FVIQTYLPCIMTVILSQVSFW GAA1_MOUSE 252 252
FVIQTYLPCIMTVILSQVSFW GAA1_HUMAN 253 253
FVIQTYLPCIMTVILSQVSFW GAA1_CHICK 253 253
FVIQTYLPCIMTVILSQVSFW GAA1_BOVIN 253 253
FVIQTYLPCIMTVILSQVSFW GAA5_RAT 260 260
FMIQTYIPCIMTVILSQVSFW GAA4_BOVIN 259 259
FMIQTYIPCIMTVILSQVSFW GAA4_HUMAN 259 259
FMIQTYIPCIMTVILSQVSFW GAA4_RAT 259 259
FTIQTYIPCILTVVLSWVSFW GAC3_HUMAN 256 256
YLIQMYIPSLLIVILSWISFW GRA1_RAT 251 251
YLIQMYIPSLLIVILSWISFW GRA1_MOUSE 251 251
YLIQMYIPSLLIVILSWISFW GRA1_HUMAN 251 251
FTIQTYIPCILTVVLSWVSFW GAC1_RAT 273 273
FTIQTYIPCILTVVLSWVSFW GAC3_MOUSE 256 256
FTIQTYIPCILTVVLSWVSFW GAC3_RAT 256 256
FAIQTYIPCILTVVLSWVSFW GAC4_CHICK 258 258
YLIQIYIPSGLIVIISWVSFW O18468 254 254
YLIQIYIPSGLIVIISWVSFW Q16896 265 265
FILQTYMPSILITILSWVSFW GAB3_MOUSE 246 246
FILQTYMPSILITILSWVSFW GAB3_HUMAN 246 246
FILQTYMPSILITILSWVSFW GAB4_CHICK 245 245
FTIQTYIPCTLIVVLSWVSFW GAC2_RAT 274 274
FTIQTYIPCTLIVVLSWVSFW GAC2_MOUSE 274 274
FTIQTYIPCTLIVVLSWVSFW GAC2_HUMAN 275 275
FTIQTYIPCTLIVVLSWVSFW GAC2_CHICK 274 274
FTIQTYIPCTLIVVLSWVSFW GAC2_BOVIN 275 275
YLIQIYIPSGLIVVISWVSFW O17145 268 268
YLIQIYIPSGLIVVISWVSFW GAB_DROME 270 270
YLIQIYIPSGLIVVISWVSFW P92138 265 265
YLIQIYIPSGLIVVISWVSFW Q24561 270 270
FVFQTYLPSILIVMLSWVSFW GAB3_DROME 259 259
FILQTYMPSTLITILSWVSFW GAB1_BOVIN 246 246
FILQTYMPSTLITILSWVSFW GAB1_RAT 246 246
FILQTYMPSTLITILSWVSFW GAB1_MOUSE 246 246
FILQTYMPSTLITILSWVSFW GAB1_HUMAN 246 246
FILQTYMPSILITILSWVSFW Q16323 245 245
FILQTYMPSILITILSWVSFW GAB2_MOUSE 245 245
FILQTYMPSILITILSWVSFW GAB2_HUMAN 245 245
YLIQIYIPCCMLVIVSWVSFW Q94900 247 247
YLIQIYIPCCMLVIVSWVSFW O77295 246 246
YLIQIYIPCCMLVIVSWVSFW O76773 248 248
FILQTYMPSILITILSWVSFW GAB3_CHICK 246 246
FIFQTYLPSILIVMLSWVSFW GAB_LYMST 252 252
YLLQLYIPSCMLVIVSWVSFW O17547 469 469
YLLQLYIPSCMLVIVSWVSFW P92023 290 290
YLLQLYIPSCMLVIVSWVSFW O17548 290 290
YLLQLYIPSFMLVIVSWVSFW Q17367 256 256
FLLQTYFPATLMVMLSWVSFW O42157 267 267
FLLQTYFPATLMVMLSWVSFW GAR1_HUMAN 278 278
FLLQTYFPATLMVMLSWVSFW GAR1_MOUSE 279 279
FLLQTYFPATLMVMLSWVSFW GAR1_RAT 279 279
FLLQTYFPATLMVMLSWVSFW GAR2_HUMAN 264 264
FVLQTYFPAMLMVMLSWVSFW GAR3_RAT 267 267
YLIQLYIPCIMLVVVSWVSFW Q17369 256 256
YLIQLYIPCIMLVVVSWVSFW O01436 480 480
YIIQSYMPSVLLVAMSWVSFW GAD_MOUSE 250 250
YIIQSYMPSVLLVAMSWVSFW GAD_RAT 250 250
YIIQSYMPSVLLVAMSWVSFW GAD_HUMAN 250 250
YIIQIYLPSVLIVVISWVSFW Q22637 262 262
YLIQLYIPCIMLLVVSWVSFW O46124 264 264
YLLQLYIPSCMLVIVSWVSFW O17793 277 277
YLLQLYIPSCMLVIVSWVSFW Q17327 277 277
FLLQTYFPATLMVMLSWVSFW GAR2_MOUSE 264 264
FLLQTYFPATLMVMLSWVSFW GAR2_RAT 264 264
YIVQMYIPSMLIVMLSWISFW Q08861 264 264
FILETYVPSTFLVVLSWVSFW GAAP_HUMAN 245 245
FILETYVPSTFLVVLSWVSFW GAAP_RAT 245 245
LAFQIYFPSSLIVVISWVSFW Q19358 229 229
VAFQNYVPSSVTTMLSWVSFW GAE_HUMAN 280 280
VAFQNYVPSSVTTMLSWVSFW O15346 280 280
VAFQNYVPSSVTTMLSWVSFW Q99520 279 279
HIIQSYIPTSLIVIISWFSFW GBR4_CAEEL 200 200
YLVQLYAPTTMIVIVSWVSFW Q17328 248 248
YLVQLYGPTTMIVIVSWVSFW P91730 251 251
FLIQVYGPCCLLVVLSWVSFW Q24352 394 394
YILQIYTPCTLVVVMSWVSFW O17555 258 258
YVLQIYTPCTLLVVMSWVSFW Q25035 250 250
YMMGVYAPTLLIVVLSWLSFW GRB_HUMAN 269 269
YMMGVYAPTLLIVVLSWLSFW GRB_MOUSE 269 269
YMMGVYAPTLLIVVLSWLSFW GRB_RAT 269 269
YIIQAYVPTYLTIIVSWVSFC Q23002 205 205
YFMQAYLPTYLTIFISWISFS Q21420 316 316
YVLQGYIPTMVTIVISWISFY Q21005 220 220
YVLQAYMPTYLSVFISWIAFW Q22658 198 198
YILQVYVPAYISVFISWVSFT O18146 231 231
YFMQAYLPTYLTIFISWISFS Q18812 262 262
YILQMYIPTYSSVFLSFVSFW O17041 261 261
IIDSFQKKTGMLVSISWMSFW O17402 377 377
YLFQSYFPTSLTVISSWVGFF YO99_CAEEL 225 225
HIAQTYIPTSLALMFSWVGVW O44917 168 168
YLLQGYIPTYMTVFISWIPFY Q20105 310 310
FLMNFYVPCALVVLLCWVAFF Q19146 279 279
HIANTYIPTAICVVFSWISVW P90876 353 353
GABAARECEPTR2 Length of motif = 22 Motif number = 2
GABAA receptor motif II - 3
PCODE ST INT
APARVALGITTVLTMTTQSSGS GRA3_HUMAN 282 5
APARVALGITTVLTMTTQSSGS GRA3_RAT 282 5
APARVALGITTVLTMTTQSSGS O75816 282 5
APARVALGITTVLTMTTQSSGS GRA2_RAT 283 5
APARVALGITTVLTMTTQSSGS GRA2_HUMAN 283 5
VPARTVFGITTVLTMTTLSISA GAA6_CHICK 269 5
VPARTVFGITTVLTMTTLSISA GAA6_HUMAN 269 5
VPARTVFGITTVLTMTTLSISA GAA6_MOUSE 259 5
VPARTVFGITTVLTMTTLSISA GAA6_RAT 269 5
VPARTVFGVTTVLTMTTLSISA GAA3_MOUSE 304 5
VPARTVFGVTTVLTMTTLSISA GAA3_HUMAN 304 5
APARVGLGITTVLTMTTQSSGS O93430 273 5
VPARTVFGITTVLTMTTLSISA Q90288 268 5
VPARTVFGVTTVLTMTTLSISA GAA3_BOVIN 304 5
VPARTVFGVTTVLTMTTLSISA GAA3_RAT 304 5
VPARTVFGVTTVLTMTTLSISA GAA5_HUMAN 286 5
VPARTVFGVTTVLTMTTLSISA GAA2_RAT 279 5
VPARTVFGVTTVLTMTTLSISA GAA2_MOUSE 279 5
VPARTVFGVTTVLTMTTLSISA GAA2_HUMAN 279 5
VPARTVFGVTTVLTMTTLSISA GAA2_BOVIN 279 5
VPARTVFGVTTVLTMTTLSISA GAA1_MOUSE 278 5
VPARTVFGVTTVLTMTTLSISA GAA1_HUMAN 279 5
VPARTVFGVTTVLTMTTLSISA GAA1_CHICK 279 5
VPARTVFGVTTVLTMTTLSISA GAA1_BOVIN 279 5
VPARTVFGVTTVLTMTTLSISA GAA5_RAT 286 5
VPARTVFGITTVLTMTTLSISA GAA4_BOVIN 285 5
VPARTVFGITTVLTMTTLSISA GAA4_HUMAN 285 5
VPARTVFGITTVLTMTTLSISA GAA4_RAT 285 5
TPARTALGITTVLTMTTLSTIA GAC3_HUMAN 282 5
APARVGLGITTVLTMTTQSSGS GRA1_RAT 277 5
APARVGLGITTVLTMTTQSSGS GRA1_MOUSE 277 5
APARVGLGITTVLTMTTQSSGS GRA1_HUMAN 277 5
VPARTSLGITTVLTMTTLSTIA GAC1_RAT 299 5
TPARTTLGITTVLTMTTLSTIA GAC3_MOUSE 282 5
TPARTTLGITTVLTMTTLSTIA GAC3_RAT 282 5
TPARTSLGITTVLTMTTLSTIS GAC4_CHICK 284 5
TPARVSLGVTTVLTMTTLMSST O18468 280 5
TPARVALGVTTVLTMTTLMSST Q16896 291 5
SAARVALGITTVLTMTTINTHL GAB3_MOUSE 272 5
SAARVALGITTVLTMTTINTHL GAB3_HUMAN 272 5
SAARVALGVTTVLTMTTINTHL GAB4_CHICK 271 5
VPARTSLGITTVLTMTTLSTIA GAC2_RAT 300 5
VPARTSLGITTVLTMTTLSTIA GAC2_MOUSE 300 5
VPARTSLGITTVLTMTTLSTIA GAC2_HUMAN 301 5
VPARTSLGITTVLTMTTLSTIA GAC2_CHICK 300 5
VPARTSLGITTVLTMTTLSTIA GAC2_BOVIN 301 5
TPARVALGVTTVLTMTTLMSST O17145 294 5
TPARVALGVTTVLTMTTLMSST GAB_DROME 296 5
TPARVALGVTTVLTMTTLMSST P92138 291 5
TPARVALGVTTVLTMTTLMSST Q24561 296 5
TSARVALGITTVLTMTTISTGV GAB3_DROME 285 5
SAARVALGITTVLTMTTISTHL GAB1_BOVIN 272 5
SAARVALGITTVLTMTTISTHL GAB1_RAT 272 5
SAARVALGITTVLTMTTISTHL GAB1_MOUSE 272 5
SAARVALGITTVLTMTTISTHL GAB1_HUMAN 272 5
SAARVALGITTVLTMTTINTHL Q16323 271 5
SAARVALGITTVLTMTTINTHL GAB2_MOUSE 271 5
SAARVALGITTVLTMTTINTHL GAB2_HUMAN 271 5
VPARVSLGVTTLLTMATQTSGI Q94900 273 5
VPARVSLGVTTLLTMATQTSGI O77295 272 5
VPARVSLGVTTLLTMATQTSGI O76773 274 5
SAARVALGITTVLTMTTINTHL GAB3_CHICK 272 5
TSARVALGITTVLTMTTISNGV GAB_LYMST 278 5
VPARVTLGVTTLLTMTTQSSGI O17547 495 5
VPARVTLGVTTLLTMTTQSSGI P92023 316 5
VPARVTLGVTTLLTMTTQSSGI O17548 316 5
VPARVTLGVTTLLTMTTQSSGI Q17367 282 5
VPARVSLGITTVLTMSTIITGV O42157 293 5
VPARVPLGITTVLTMSTIITGV GAR1_HUMAN 304 5
VPARVPLGITTVLTMSTIITGV GAR1_MOUSE 305 5
VPARVPLGITTVLTMSTIITGV GAR1_RAT 305 5
VPARVSLGITTVLTMTTIITGV GAR2_HUMAN 290 5
VPARVSLGITTVLTMSTIVTGV GAR3_RAT 293 5
VPARVSLGVTTLLTMTTQASGI Q17369 282 5
VPARVSLGVTTLLTMTTQASGI O01436 506 5
VPARVSLGITTVLTMTTLMVSA GAD_MOUSE 276 5
VPARVSLGITTVLTMTTLMVSA GAD_RAT 276 5
VPARVSLGITTVLTMTTLMVSA GAD_HUMAN 276 5
TPARVALGVTTVLTMTTLMTMT Q22637 288 5
VPARVSLGVTTLLTMTTQASGI O46124 290 5
IPARVTLGVTTLLTMTAQSAGI O17793 303 5
IPARVTLGVTTLLTMTAQSAGI Q17327 303 5
VPARVSLGIMTVLTMSTIITGV GAR2_MOUSE 290 5
VPARVSLGIMTVLTMSTIITGV GAR2_RAT 290 5
VPGRVSLGLLTVLTMTTQSSSV Q08861 290 5
VPARTCIGVTTVLSMTTLMIGS GAAP_HUMAN 271 5
VPARTCIGVTTVLSMTTLMIGS GAAP_RAT 271 5
VQARVAIGVTTVLTMTTLMTST Q19358 255 5
APARTSLGITSVLTMTTLGTFS GAE_HUMAN 306 5
APARTSLGITSVLTMTTLGTFS O15346 306 5
APARTSLGITSVLTMTTLGTFS Q99520 305 5
VPGRVSLSITTLLTLATQSSAA GBR4_CAEEL 226 5
TAGRVALGVTTLLTMTTMQSAI Q17328 274 5
TAGRVALGVTTLLTMTTMQAAI P91730 277 5
TADRVSLGITTVLTMTFLGLEA Q24352 420 5
SPARVSLGIMTVLSMSTIGFGL O17555 284 5
SPARVALGIMTVLSMSTLGFGL Q25035 276 5
SAARVPLGIFSVLSLASECTTL GRB_HUMAN 295 5
SAARVPLGIFSVLSLASECTTL GRB_MOUSE 295 5
SAARVPLGIFSVLSLASECTTL GRB_RAT 295 5
LPARTTVGISSLLALTFQFGNI Q23002 231 5
MPARTMLGVNALLAMIFQFGNI Q21420 342 5
IPARTMLGVNSLLAMTFQFGNI Q21005 246 5
LPARITLGVSSLMALTFQFGNI Q22658 224 5
IPSRTTVGVNSLLALTFQFGAV O18146 257 5
IPARTMLGVNSLLAIVFSFGNI Q18812 288 5
LPARITLGVSSLMALTFQYGNV O17041 287 5
SPARISLTITSLLTLTTMSNGA O17402 403 5
VSARITLGVSSLLALTFQFGNV YO99_CAEEL 251 5
MEGRIGVAITVLLTLSTESAGA O44917 194 5
IPARTMIGVNALLALTFQFGNI Q20105 336 5
TAERIGIGITNVLTIVLISMDS Q19146 305 5
VEGRIFVSLTVFLTLSAENNSA P90876 379 5
GABAARECEPTR3 Length of motif = 22 Motif number = 3
GABAA receptor motif III - 3
PCODE ST INT
IDIWMAVCLLFVFSALLEYAAV GRA3_HUMAN 316 12
IDIWMAVCLLFVFSALLEYAAV GRA3_RAT 316 12
IDIWMAVCLLFVFSALLEYAAV O75816 316 12
IDIWMAVCLLFVFAALLEYAAV GRA2_RAT 317 12
IDIWMAVCLLFVFAALLEYAAV GRA2_HUMAN 317 12
MDWFIAVCFAFVFSALIEFAAV GAA6_CHICK 303 12
MDWFIAVCFAFVFSALIEFAAV GAA6_HUMAN 303 12
MDWFIAVCFAFVFSALIEFAAV GAA6_MOUSE 293 12
MDWFIAVCFAFVFSALIEFAAV GAA6_RAT 303 12
MDWFIAVCYAFVFSALIEFATV GAA3_MOUSE 338 12
MDWFIAVCYAFVFSALIEFATV GAA3_HUMAN 338 12
IDIWMAVCLLFVFSALLEYAAV O93430 307 12
MDWFIAVCFAFVFSALIEFAAV Q90288 302 12
MDWFMAVCYAFVFSALIEFATV GAA3_BOVIN 338 12
MDWFMAVCYAFVFSALIEFATV GAA3_RAT 338 12
MDWFIAVCYAFVFSALIEFATV GAA5_HUMAN 320 12
MDWFIAVCYAFVFSALIEFATV GAA2_RAT 313 12
MDWFIAVCYAFVFSALIEFATV GAA2_MOUSE 313 12
MDWFIAVCYAFVFSALIEFATV GAA2_HUMAN 313 12
MDWFIAVCYAFVFSALIEFATV GAA2_BOVIN 313 12
MDWFIAVCYAFVFSALIEFATV GAA1_MOUSE 312 12
MDWFIAVCYAFVFSALIEFATV GAA1_HUMAN 313 12
MDWFIAVCYAFVFSALIEFATV GAA1_CHICK 313 12
MDWFIAVCYAFVFSALIEFATV GAA1_BOVIN 313 12
MDWFIAVCYAFVFSALIEFATV GAA5_RAT 320 12
MDWFIAVCFAFVFSALIEFAAV GAA4_BOVIN 320 13
MDWFIAVCFAFVFSALIEFAAV GAA4_HUMAN 319 12
MDWFIAVCFAFVFSALIEFAAV GAA4_RAT 319 12
MDLFVTVCFLFVFAALMEYATL GAC3_HUMAN 316 12
IDIWMAVCLLFVFSALLEYAAV GRA1_RAT 311 12
IDIWMAVCLLFVFSALLEYAAV GRA1_MOUSE 311 12
IDIWMAVCLLFVFSALLEYAAV GRA1_HUMAN 311 12
MDLFVSVCFIFVFAALMEYGTL GAC1_RAT 333 12
MDLFVTVCFLFVFAALMEYATL GAC3_MOUSE 316 12
MDLFVTVCFLFVFAALMEYATL GAC3_RAT 316 12
MDLFVSVCFIFVFAALMEYATL GAC4_CHICK 318 12
IDVYLGTCFVMVFASLLEYATV O18468 314 12
IDVYLGTCFVMVFASLLEYATV Q16896 325 12
IDMYLMGCFVFVFLALLEYAFV GAB3_MOUSE 306 12
IDMYLMGCFVFVFLALLEYAFV GAB3_HUMAN 306 12
IDVYLMGCFVFVFLALLEYAFV GAB4_CHICK 305 12
MDLFVSVCFIFVFSALVEYGTL GAC2_RAT 334 12
MDLFVSVCFIFVFSALVEYGTL GAC2_MOUSE 334 12
MDLFVSVCFIFVFSALVEYGTL GAC2_HUMAN 335 12
MDLFVSVCFIFVFSALVEYGTL GAC2_CHICK 334 12
MDLFVSVCFIFVFSALVEYGTL GAC2_BOVIN 335 12
IDVYLGACFVMVFASLLEYATV O17145 328 12
IDVYLGTCFVMVFASLLEYATV GAB_DROME 330 12
IDVYLGTCFVMVFASLLEYATV P92138 325 12
IDVYLGTCFVMVFASLLEYATV Q24561 330 12
IDIYLVMCFVFVFAALLEYAAV GAB3_DROME 319 12
IDIYLMGCFVFVFLALLEYAFV GAB1_BOVIN 306 12
IDIYLMGCFVFVFLALLEYAFV GAB1_RAT 306 12
IDIYLMGCFVFVFLALLEYAFV GAB1_MOUSE 306 12
IDIYLMGCFVFVFLALLEYAFV GAB1_HUMAN 306 12
IDMYLMGCFVFVFMALLEYALV Q16323 305 12
IDMYLMGCFVFVFMALLEYALV GAB2_MOUSE 305 12
IDMYLMGCFVFVFMALLEYALV GAB2_HUMAN 305 12
IDVWTGVCLTFVFGALLEFALV Q94900 307 12
IDVWTGVCLTFVFGALLEFALV O77295 306 12
IDVWTGVCLTFVFGALLEFALV O76773 308 12
IDMYLMGCFVFVFLALLEYAFV GAB3_CHICK 306 12
IDIYLVMCFVFVFAALLEYAAV GAB_LYMST 312 12
IDVWIGACMTFIFCALLEFAWV O17547 529 12
IDVWIGACMTFIFCALLEFAWV P92023 350 12
IDVWIGACMTFIFCALLEFAWV O17548 350 12
IDVWIGVCLAFIFGALLEFALV Q17367 316 12
VDIYLWVSFVFVFLSVLEYAAV O42157 327 12
VDIYLWVSFVFVFLSVLEYAAV GAR1_HUMAN 338 12
VDIYLWVSFVFVFLSVLEYAAV GAR1_MOUSE 339 12
VDIYLWVSFVFVFLSVLEYAAV GAR1_RAT 339 12
VDIYLWVSFVFVFLSVLEYAAV GAR2_HUMAN 324 12
VDVYMWVSSLFVFLSVIEYAAV GAR3_RAT 327 12
VDVWIGVCLAFIFGALLEYAVV Q17369 316 12
VDVWIGVCLAFIFGALLEYAVV O01436 540 12
LDVYFWICYVFVFAALVEYAFA GAD_MOUSE 310 12
LDVYFWICYVFVFAALVEYAFA GAD_RAT 310 12
LDVYFWICYVFVFAALVEYAFA GAD_HUMAN 310 12
IDIFLGVCFMMVFCSLLEYAAV Q22637 322 12
VDVWIGVCLAFIFGALLEYAVV O46124 324 12
IDVWIGACMTFIFCALLEFALV O17793 337 12
IDVWIGACMTFIFCALLEFALV Q17327 337 12
VDIYLWVSFVFVFLSVLEYAAV GAR2_MOUSE 324 12
VDIYLWVSFVFVFLSVLEYAAV GAR2_RAT 324 12
IDVWMSTCLVFVFAALLEFAVV Q08861 324 12
IDVYLGICFSFVFGALLEYAVA GAAP_HUMAN 306 13
IDVYLGICFSFVFGALLEYAVA GAAP_RAT 306 13
LDVFLGVCFFIVFASLLEYAAI Q19358 289 12
LDFYIAICFVFCFCALLEFAVL GAE_HUMAN 340 12
LDFYIAICFVFCFCALLEFAVL O15346 340 12
LDFYIAICFVFCFCALLEFAVL Q99520 339 12
IDVWMGTCMAFVFSAMIEFTVV GBR4_CAEEL 260 12
VDVWLGACQTFVFGALLEYAFV Q17328 308 12
VDVWLGACQTFVFGALLEYAFV P91730 311 12
LDFFVFLSFGFIFATILQFAVV Q24352 454 12
LDVYILTCFVFLFAAMVEYAVI O17555 318 12
LDIYILSCFGFVFAAMVEYSVI Q25035 310 12
LDVWLIACLLFGFASLVEYAVV GRB_HUMAN 329 12
LDVWLIACLLFGFASLVEYAVV GRB_MOUSE 329 12
LDVWLIACLLFGFASLVEYAVV GRB_RAT 329 12
MDVWMLGCISFVFGTMVELAFV Q23002 265 12
IDVWMLVSMTFIFLSLLELAIV Q21420 376 12
IDVWMLSGMLFIFLSLLELAVV Q21005 280 12
LDIWMFGCVGFIFLSLVELAVV Q22658 258 12
IDVWILSSMAFIFASLIELAVV O18146 291 12
IDVWMLVSMTFIFCSLLELAIV Q18812 322 12
IDVYMVLTTAFIFLTMIEVAFV O17041 321 12
LDIWLTFSQALIFLVLLEYSFV O17402 437 12
LDVWMIFSVIFIFCTLVELAIV YO99_CAEEL 285 12
IDLWFGFITGFVFFTLLQTLFV O44917 228 12
HIFFSFSGICFVFASLFELATI Q20105 402 44
LEVFIWICYLTHLICMVEFTVV Q19146 339 12
IDIWFGFTSTFVFLTMLQALVV P90876 413 12
GABAARECEPTR4 Length of motif = 21 Motif number = 4
GABAA receptor motif IV - 3
PCODE ST INT
ISRACFPLAFLIFNIFYWVIY GRA3_HUMAN 431 93
ISRACFPLAFLIFNIFYWVIY GRA3_RAT 431 93
ISRACFPLAFLIFNIFYWVIY O75816 416 78
ISRAAFPLAFLIFNIFYWITY GRA2_RAT 421 82
ISRAAFPLAFLIFNIFYWITY GRA2_HUMAN 421 82
YSRILFPVAFAGFNLVYWVVY GAA6_CHICK 422 97
YSRILFPVAFAGFNLVYWVVY GAA6_HUMAN 420 95
YSRILFPVAFAGFNLVYWIVY GAA6_MOUSE 410 95
YSRILFPVAFAGFNLVYWIVY GAA6_RAT 420 95
ISRIIFPVLFAIFNLVYWATY GAA3_MOUSE 458 98
ISRIIFPVLFAIFNLVYWATY GAA3_HUMAN 458 98
VSRVAFPLVFLIFNIFYWITY O93430 413 84
YSRILFPLSFGAFNLVYWIVY Q90288 407 83
ISRIIFPVLFAIFNLVYWATY GAA3_BOVIN 458 98
ISRIIFPVLFAIFNLVYWATY GAA3_RAT 459 99
MSRIVFPVLFGTFNLVYWATY GAA5_HUMAN 428 86
MSRIVFPVLFGTFNLVYWATY GAA2_RAT 420 85
MSRIVFPVLFGTFNLVYWATY GAA2_MOUSE 420 85
MSRIVFPVLFGTFNLVYWATY GAA2_HUMAN 420 85
MSRIVFPVLFGTFNLVYWATY GAA2_BOVIN 420 85
LSRIAFPLLFGIFNLVYWATY GAA1_MOUSE 421 87
LSRIAFPLLFGIFNLVYWATY GAA1_HUMAN 422 87
LSRIAFPLLFGIFNLVYWATY GAA1_CHICK 421 86
LSRIAFPLLFGIFNLVYWATY GAA1_BOVIN 422 87
MSRIVFPILFGTFNLVYWATY GAA5_RAT 430 88
YARILFPVTFGAFNMVYWVVY GAA4_BOVIN 523 181
YARILFPVTFGAFNMVYWVVY GAA4_HUMAN 521 180
YARILFPVTFGAFNMVYWVVY GAA4_RAT 519 178
YSRVFFPTSFLLFNLVYWVGY GAC3_HUMAN 444 106
ISRIGFPMAFLIFNMFYWIIY GRA1_RAT 418 85
ISRIGFPMAFLIFNMFYWIIY GRA1_MOUSE 418 85
ISRIGFPMAFLIFNMFYWIIY GRA1_HUMAN 418 85
YSRIFFPTAFALFNLVYWVGY GAC1_RAT 442 87
YSRVFFPTSFLLFNLVYWVGY GAC3_MOUSE 444 106
YSRVFFPTSFLLFNLVYWVGY GAC3_RAT 444 106
YSRVFFPTAFLLFNIVYWIAY GAC4_CHICK 434 94
YSRIVFPVCFVCFNLMYWIIY O18468 458 122
YSRIVFPVCFVCFNLMYWIIY Q16896 495 148
WSRIVFPFTFSLFNLVYWLYY GAB3_MOUSE 451 123
WSRIVFPFTFSLFNLVYWLYY GAB3_HUMAN 451 123
WSRIIFPITFGFFNLVYWLYY GAB4_CHICK 466 139
YARIFFPTAFCLFNLVYWVSY GAC2_RAT 443 87
YARIFFPTAFCLFNLVYWVSY GAC2_MOUSE 451 95
YARIFFPTAFCLFNLVYWVSY GAC2_HUMAN 444 87
YARIFFPTAFCLFNLVYWVSY GAC2_CHICK 451 95
YARIFFPTAFCLFNLVYWVSY GAC2_BOVIN 452 95
YSRIVFPVCFVCFNLMYWIIY O17145 513 163
YSRIVFPVCFVCFNLMYWIIY GAB_DROME 569 217
YSRIVFPVCFVCFNLMYWIIY P92138 564 217
YSRIVFPVCFVCFNLMYWIIY Q24561 569 217
YSRMIFPISFLAFNLGYWLFY GAB3_DROME 473 132
WSRMFFPITFSLFNVVYWLYY GAB1_BOVIN 452 124
WSRMFFPITFSLFNVVYWLYY GAB1_RAT 452 124
WSRMFFPITFSLFNVVYWLYY GAB1_MOUSE 452 124
WSRMFFPITFSLFNVVYWLYY GAB1_HUMAN 452 124
WSRIFFPVVFSFFNIVYWLYY Q16323 490 163
WSRIFFPVVFSFFNIVYWLYY GAB2_MOUSE 452 125
WSRIFFPVVFSFFNIVYWLYY GAB2_HUMAN 452 125
ISRITFPLVFALFNLVYWSTY Q94900 428 99
ISRITFPLVFALFNLVYWSTY O77295 423 95
ISRITFPLVFALFNLVYWSTY O76773 424 94
WSRMVFPFTFSLFNLIYWLYY GAB3_CHICK 454 126
YARLMFPLLFIIFNTSYWSVY GAB_LYMST 476 142
ISRVMFPVLFLTFNISYWTHY O17547 628 77
ISRVMFPVLFLTFNISYWTHY P92023 449 77
ISRVMFPVLFLTFNISYWTHY O17548 449 77
VSRLVFPIGYACFNVLYWAVY Q17367 394 56
YSRMIFPGAYILFNLIYWCVY O42157 452 103
YSRIIFPAAYILFNLIYWSIF GAR1_HUMAN 452 92
YSRIIFPAAYILFNLIYWSIF GAR1_MOUSE 453 92
YSRIIFPAAYILFNLIYWSIF GAR1_RAT 453 92
YSRLIFPASYIFFNLIYWSVF GAR2_HUMAN 444 98
YSRIVFPVVYIIFNLFYWGIY GAR3_RAT 443 94
MSRLTFPLTFFSFLIFYYVAY Q17369 404 66
MSRLTFPLTFFSFLIFYYVAY O01436 628 66
YARAVFPAAFAAVNIIYWAAY GAD_MOUSE 427 95
YARAVFPAAFAAVNIIYWAAY GAD_RAT 427 95
YARAVFPAAFAAVNVIYWAAY GAD_HUMAN 430 98
VSRAAFPLVFILFNTLFWLIL Q22637 1062 718
MSRITFPSLFTAFLVFYYSVY O46124 411 65
ISRALFPVLFFVFNILYWSRF O17793 468 109
ISRALFPVLFFVFNILYWSRF Q17327 434 75
YSRLIFPAFYIVFNLIYWSVF GAR2_MOUSE 444 98
YSRLIFPAFYIVFNLIYWSVF GAR2_RAT 444 98
TARVVFPICFIIFIMSYWLYY Q08861 413 67
YSKLLFPLIFMLANVFYWAYY GAAP_HUMAN 417 89
YSKLLFPLIFMLANVFYWAYY GAAP_RAT 417 89
FSRFAFPIFFVIFHIVYWTYY Q19358 419 108
YSRVVFPVTFFFFNVLYWLVC GAE_HUMAN 483 121
YSRVVFPVTFFFFNVLYWLVC O15346 483 121
YSRVVFPVTFFFFNVLYWLVC Q99520 482 121
YSRALFPLAFIIFNIFYWIYY GBR4_CAEEL 390 108
YARFVVPLAFLAFNVIYWVSC Q17328 400 70
YARFCVPLGFLAFNAIYWTSC P91730 404 71
ASRIVFPLLFILINVFYWYGY Q24352 650 174
FSKLAFPTLYIIFNVFYWVAY O17555 460 120
VSKVIFPSLYVLFNILYWVAF Q25035 433 101
YARALFPFCFLFFNVIYWSIY GRB_HUMAN 476 125
YARALFPFCFLFFNVIYWSIY GRB_MOUSE 475 124
YARALFPFCFLFFNVIYWSIY GRB_RAT 475 124
FSIVAFPLAFTMFNLVYWWHY Q23002 365 78
VSAIMFPACFAIFNIVYWSYY Q21420 468 70
YSAIFFPTAYMLFNISYWSFY Q21005 407 105
ISAKLFPLLFTAFNIFYWFYY Q22658 370 90
MSSIVFPVSFLAFNIWYWFIF O18146 346 33
ISSVMFPFSFFVFNIIYWFYY Q18812 408 64
FCRKAFPLSFCFLNLIYWCYY O17041 452 109
YSRWLFPTVFSLFCVSYWLYF O17402 572 113
CSMIMFPLSFLIFNVILVNIF YO99_CAEEL 448 141
FCRVFYPLSFILFLLMYYFVF O44917 295 45
TSRLMFPGLYVCGIVFTFYNF Q20105 473 49
ISVIVAPLIFILTIALYYDFY Q19146 500 139
FCKVMYPVIFLLFLMFYVFVI P90876 480 45
User query: Display/Full Code "GABAARECEPTR"