WORKLIST ENTRIES (1):
CPSASE View alignment View Structure Carbamoyl-phosphate synthase protein CPSase domain signature
Type of fingerprint: COMPOUND with 7 elements
Links:
PRINTS; PR00099 CPSGATASE; PR00096 GATASE; PR00097 ANTSNTHASEII
PRINTS; PR00101 ATCASE; PR00102 OTCASE; PR00100 AOTCASE
INTERPRO; IPR000901
PROSITE; PS00866 CPSASE_1; PS00867 CPSASE_2
Creation date 14-MAR-1992; UPDATE 26-JUN-1999
1. MAKOFF, A.J. AND RADFORD A.
Genetics and biochemistry of carbamoyl-phosphate biosynthesis and its
utilisation in the pyrimidine biosynthetic pathway.
MICROBIOL.REV. 42 307-328 (1978).
2. PIETTE, J., NYUNOYA, H., LUSTY, C.J., CUNIN, R., WEYENS, G., CRABEEL,
M., CHARLIER, D., GLANSDORFF, N. AND PIERARD, A.
DNA sequence of the carA gene and the control region of carAB: Tandem
promoters, respectively controlled by arginine and the pyrimidines,
regulate the synthesis of carbamoyl-phosphate synthetase in E.coli K-12.
PROC.NATL.ACAD.SCI.U.S.A. 81 4134-4138 (1984).
3. SIMMER, J.P., KELLY, R.E., RINKER, A.G., SCULLY, J.L. AND EVANS, D.R.
Mammalian carbamoyl phosphate synthetase.
J.BIOL.CHEM. 265 10395-10402 (1990).
Carbamoyl-phosphate synthetase (CPSase) is an enzyme of special interest,
being common to both the arginine and pyrimidine biosynthetic pathways: it
thus raises the problem of how to regulate pyrimidine and arginine
biosynthesis separately. CPSase catalyses the production of carbamoyl-
phosphate from its precursors, the precursors depending on the pathway
involved: in pyrimidine biosynthesis the nitrogen donor is glutamate, the
other precursors being ATP and hydrogen carbonate; in arginine biosynthesis
the precursors are carbon dioxide and an ammonium ion.
E.coli and other bacteria possess only one CPSase enzyme, which produces
carbamoyl-phosphate for both pathways and has 2 subunits coded for by the
genes carA and carB: carA codes for the small subunit, which has glutamine
amidotransferase (GATase) activity, and carB codes for the large subunit,
which has CPSase activity. These 2 genes are genetically linked as the
carAB operon, which is differentially regulated at 2 tandem promoters
during transcription by both arginine and UMP, while ornithine stimulates
activity.
Eukaryotes possess 2 different CPSase enzymes, one for each pathway, both
of which are comparmentalised and regulated separately. Pyrimidine
biosynthesis occurs in the cytosol where glutamine is the nitrogen donor,
and arginine biosynthesis (the urea cycle) occurs in the mitochondria where
ammonium ions are the nitrogen donors, with N-acetylglutamine acting as an
allosteric activator. The arginine-specific CPSase catalyses the same
overall reaction and has the same structure as the prokaryotic enzyme, yet
in S.cerevisiae the 2 genes, CPA1 and CPA2, are unlinked. In this organism,
the gene URA2 codes for the glutamine-dependent carbamoylphosphate
synthetase and the ATCase for the pyrimidine biosynthetic pathway.
Two main CPSases have been identified in mammals: CPSase I is mitochondrial,
it is found in high levels in the liver and is involved in arginine bio-
synthesis; CPSase II is cytosolic, it is associated with aspartate
carbamoyltransferase (ATCase) and dihydroorotase (DHOase) and is involved
in pyrimidine biosynthesis. In the pyrimidine pathway in most eukaryotes,
CPSase is found as a domain in a multi-functional protein, which also has
GATase, ACTase and DHOase activity.
CPSASE is a 7-element fingerprint that provides a signature for the
carbamoyl-phosphate synthase CPSase domain. The fingerprint was derived
from an initial alignment of 5 sequences: motifs 3 and 6 include regions
encoded by PROSITE patterns CPSASE_1 (PS00866) and CPSASE_2 (PS00867).
Two iterations on OWL18.0 were required to reach convergence, at which
point a true set comprising 9 sequences was identified. Three partial
matches were also found: PYR1_DICDI is a fusion protein containing
glutamine-dependent CPsase-, ATCase- and DHOase-activity, but the CPSase
region is incomplete; CARB_METBA is a fragment of the large chain of the
CPSase protein from Methanosacina barkeri; SCURA2 is a fragment of a yeast
protein that has been translated from the 5'-region of the URA2 gene for
carbamoyl-phosphate synthetase and lacks the portion of sequence bearing
the last 5 motifs.
An update on SPTR37_9f identified a true set of 41 sequences, and 1
partial match.
SUMMARY INFORMATION
41 codes involving 7 elements
0 codes involving 6 elements
0 codes involving 5 elements
1 codes involving 4 elements
0 codes involving 3 elements
0 codes involving 2 elements
COMPOSITE FINGERPRINT INDEX
7| 41 41 41 41 41 41 41
6| 0 0 0 0 0 0 0
5| 0 0 0 0 0 0 0
4| 1 1 1 1 0 0 0
3| 0 0 0 0 0 0 0
2| 0 0 0 0 0 0 0
--+------------------------------------
| 1 2 3 4 5 6 7
True positives..
PYR1_SQUAC PYR1_MESAU PYR1_YEAST PYR1_SCHPO
Q92115 PYR1_DICDI PYR1_HUMAN Q18990
CARB_TRICU P70087 CPSM_HUMAN CPSM_RANCA
O28994 CPSM_RAT CARB_YEAST O67869
O42433 Q42601 O15829 CARB_BACCL
Q51430 O15830 CARB_BACSU P96495
Q55756 CARB_SALTY CARB_ECOLI O50236
O50302 CARB_LACPL CARY_BACSU Q27448
Q27732 PYR1_DROME O25577 Q59599
O32771 CARB_SULSO Q58776 O67233
O27077
Subfamily: Codes involving 4 elements
Subfamily True positives..
O27078
PROTEIN TITLES
PYR1_SQUAC CAD PROTEIN [INCLUDES: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPHA
PYR1_MESAU CAD PROTEIN [INCLUDES: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPHA
PYR1_YEAST URA2 PROTEIN [INCLUDES: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPH
PYR1_SCHPO URA1 PROTEIN [INCLUDES: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPH
Q92115 CARBAMOYL PHOSPHATE SYNTHETASE III [GLUTAMINE] MITOCHONDRIAL
PYR1_DICDI PROTEIN PYR1-3 [INCLUDES: GLUTAMINE-DEPENDENT CARBAMOYL-PHOS
PYR1_HUMAN CAD PROTEIN [INCLUDES: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPHA
Q18990 D2085.1 PROTEIN - CAENORHABDITIS ELEGANS.
CARB_TRICU CARBAMOYL-PHOSPHATE SYNTHASE, ARGININE-SPECIFIC, LARGE CHAIN
P70087 CARBAMOYL-PHOSPHATE SYNTHETASE III (EC 6.3.5.5) (CARBAMOYL-P
CPSM_HUMAN CARBAMOYL-PHOSPHATE SYNTHASE [AMMONIA], MITOCHONDRIAL PRECUR
CPSM_RANCA CARBAMOYL-PHOSPHATE SYNTHASE [AMMONIA], MITOCHONDRIAL PRECUR
O28994 CARBAMOYL-PHOSPHATE SYNTHASE, LARGE (OR AMMONIA) SUBUNIT (CA
CPSM_RAT CARBAMOYL-PHOSPHATE SYNTHASE [AMMONIA], MITOCHONDRIAL PRECUR
CARB_YEAST CARBAMOYL-PHOSPHATE SYNTHASE, ARGININE-SPECIFIC, LARGE CHAIN
O67869 CARBAMOYL-PHOSPHATE SYNTHASE LARGE SUBUNIT - AQUIFEX AEOLICU
O42433 CARBAMOYL-PHOSPHATE SYNTHETASE III (EC 6.3.5.5) - MICROPTERU
Q42601 CARBAMOYL PHOSPHATE SYNTHETASE LARGE CHAIN (EC 6.3.4.16) (CA
O15829 CARBAMYL PHOSPHATE SYNTHASE - LEISHMANIA MEXICANA.
CARB_BACCL CARBAMOYL-PHOSPHATE SYNTHASE, PYRIMIDINE-SPECIFIC, LARGE CHA
Q51430 CARBAMOYLPHOSPHATE SYNTHETASE LARGE SUBUNIT - PSEUDOMONAS AE
O15830 CARBAMYL PHOSPHATE SYNTHASE - TRYPANOSOMA CRUZI.
CARB_BACSU CARBAMOYL-PHOSPHATE SYNTHASE, PYRIMIDINE-SPECIFIC, LARGE CHA
P96495 CARBAMOYL-PHOSPHATE SYNTHASE (GLUTAMINE-HYDROLYSING) LARGE S
Q55756 CARBAMOYL-PHOSPHATE SYNTHASE, PYRIMIDINE-SPECIFIC, LARGE CHA
CARB_SALTY CARBAMOYL-PHOSPHATE SYNTHASE LARGE CHAIN (EC 6.3.5.5) (CARBA
CARB_ECOLI CARBAMOYL-PHOSPHATE SYNTHASE LARGE CHAIN (EC 6.3.5.5) (CARBA
O50236 CARBAMOYLPHOSPHATE SYNTHETASE LARGE SUBUNIT - ZYMOMONAS MOBI
O50302 CARBOMYLPHOSPHATE SYNTHETASE LARGE SUBUNIT - BACILLUS STEARO
CARB_LACPL CARBAMOYL-PHOSPHATE SYNTHASE, PYRIMIDINE-SPECIFIC, LARGE CHA
CARY_BACSU CARBAMOYL-PHOSPHATE SYNTHASE, ARGININE-SPECIFIC, LARGE CHAIN
Q27448 GLUTAMINE-DEPENDENT CARBAMOYL PHOSPHATE SYNTHASE (EC 6.3.5.5
Q27732 CARBAMOYL-PHOSPHATE SYNTHASE - PLASMODIUM FALCIPARUM.
PYR1_DROME CAD PROTEIN (RUDIMENTARY PROTEIN) [INCLUDES: GLUTAMINE-DEPEN
O25577 CARBAMOYL-PHOSPHATE SYNTHASE (GLUTAMINE-HYDROLYSING) (PYRAB)
Q59599 CARBAMOYL PHOSPHATE SYNTHETASE (GLUTAMINE) LARGE SUBUNIT (EC
O32771 CARBAMOYLPHOSPHATE SYNTHETASE - LACTOCOCCUS LACTIS.
CARB_SULSO CARBAMOYL-PHOSPHATE SYNTHASE LARGE CHAIN (EC 6.3.5.5) (CARBA
Q58776 HYPOTHETICAL PROTEIN MJ1381 - METHANOCOCCUS JANNASCHII.
O67233 CARBAMOYL-PHOSPHATE SYNTHASE LARGE SUBUNIT - AQUIFEX AEOLICU
O27077 CARBAMOYL-PHOSPHATE SYNTHASE, LARGE SUBUNIT - METHANOBACTERI
O27078 CARBAMOYL-PHOSPHATE SYNTHASE, LARGE SUBUNIT - METHANOBACTERI
SCAN HISTORY
OWL18_0 2 50 NSINGLE
OWL19_1 1 50 NSINGLE
OWL26_0 1 100 NSINGLE
SPTR37_9f 4 75 NSINGLE
INITIAL MOTIF SETS
CPSASE1 Length of motif = 15 Motif number = 1
CPSase motif I - 1
PCODE ST INT
SIGQAGEFDYSGSQA CARB_YEAST 40 40
SIGQAGEFDYSGSQA PYR1_DROME 420 420
SIGQAGEFDYSGSQA PYR1_MESAU 405 405
SIGQAGEFDYSGSQA PYR1_YEAST 449 449
VIGQACEFDYSGAQA CARB_ECOLI 18 18
CPSASE2 Length of motif = 11 Motif number = 2
CPSase motif II - 1
PCODE ST INT
NPNIATNQTSH CARB_YEAST 69 14
NPNIATVQTSK PYR1_DROME 449 14
NPNIATVQTSQ PYR1_MESAU 434 14
NPNIATIQTSK PYR1_YEAST 478 14
NSNPATIMTDP CARB_ECOLI 47 14
CPSASE3 Length of motif = 13 Motif number = 3
CPSase motif III - 1
PCODE ST INT
VRSAYALGGLGSG CARB_YEAST 189 109
ARAAFSLGGLGSG PYR1_DROME 568 108
VRAAFALGGLGSG PYR1_MESAU 554 109
VRAAYALGGLGSG PYR1_YEAST 596 107
IRPSFTMGGSGGG CARB_ECOLI 167 109
CPSASE4 Length of motif = 20 Motif number = 4
CPSase motif IV - 1
PCODE ST INT
ILVEKSLKGWKEVEYEVVRD CARB_YEAST 223 21
LIVDKSLKGWKEVEYEVVRA PYR1_DROME 602 21
VLIDKSLKGWKEIEYEVVRD PYR1_MESAU 588 21
VLVEKSMKGWKEVEYEVVRD PYR1_YEAST 630 21
LLIDESLIGWKEYEMEVVRD CARB_ECOLI 203 23
CPSASE5 Length of motif = 18 Motif number = 5
CPSase motif V - 1
PCODE ST INT
PLGVHTGDSMVFAPSQTL CARB_YEAST 258 15
PLGIHTGESIVVAPSQTL PYR1_DROME 638 16
PLGIHTGESIVVAPSQTL PYR1_MESAU 623 15
PLGIHTGDSIVVAPSQTL PYR1_YEAST 665 15
AMGIHTGDSITVAPAQTL CARB_ECOLI 238 15
CPSASE6 Length of motif = 30 Motif number = 6
CPSase motif VI - 1
PCODE ST INT
VIEVNARLSRSSALASKATGYPLAYTAAKI CARB_YEAST 315 39
IIEVNERLSRTSALASKAPGYPLAYVAAKV PYR1_DROME 694 38
IIEVNARLSRSSALASKATGYPLAYVAAKL PYR1_MESAU 680 39
IIEVNARLSRSSALASKATGYPLAYTAAKL PYR1_YEAST 722 39
VIEMNPRVSRSSALASKATGFPIAKVAAKL CARB_ECOLI 296 40
CPSASE7 Length of motif = 19 Motif number = 7
CPSase motif VII - 1
PCODE ST INT
SVGEVMAIGRNYEEAFQKA CARB_YEAST 397 49
SVGEVMAIGRQLRGSVPKS PYR1_DROME 776 49
SVGEVMGIGRSFEEAFQKA PYR1_MESAU 761 48
SVGEVMSIGRTFEEAIQKA PYR1_YEAST 804 49
SVGEVMAIGRTQQESLQKA CARB_ECOLI 379 50
FINAL MOTIF SETS
CPSASE1 Length of motif = 15 Motif number = 1
CPSase motif I - 4
PCODE ST INT
SIGQAGEFDYSGSQA PYR1_SQUAC 408 408
SIGQAGEFDYSGSQA PYR1_MESAU 405 405
SIGQAGEFDYSGSQA PYR1_YEAST 450 450
SIGQAGEFDYSGSQA PYR1_SCHPO 486 486
SIGQAGEFDYSGSQA Q92115 435 435
SIGQAGEFDYSGSQA PYR1_DICDI 377 377
SIGQAGEFDYSGSQA PYR1_HUMAN 405 405
TIGQAGEFDYSGAQA Q18990 402 402
SIGQAGEFDYSGSQA CARB_TRICU 87 87
SIGQAGEFDYSGSQA P70087 432 432
SIGQAGEFDYSGSQA CPSM_HUMAN 434 434
SIGQAGEFDYSGSQA CPSM_RANCA 431 431
VIGQAAEFDYSGSQA O28994 19 19
SIGQAGEFDYSGSQA CPSM_RAT 434 434
SIGQAGEFDYSGSQA CARB_YEAST 40 40
VIGQAAEFDYSGTQA O67869 19 19
SIGQAGEFDYSGSQA O42433 435 435
VIGQACEFDYSGTQA Q42601 110 110
VIAQAGEFDYSGSQC O15829 384 384
VIGQAAEFDYAGTQA CARB_BACCL 19 19
VIGQACEFDYSGAQA Q51430 19 19
VIAQAGEFDYSGSQC O15830 385 385
IIGQAAEFDYAGTQA CARB_BACSU 19 19
TIGQAAEFDYSGTQA P96495 19 19
VIGQACEFDYSGTQA Q55756 43 43
VIGQACEFDYSGAQA CARB_SALTY 18 18
VIGQACEFDYSGAQA CARB_ECOLI 18 18
VIGQACEFDYSGTQA O50236 19 19
VIGQAAEFDYAGTQA O50302 19 19
IIGQAAEFDYSGTQA CARB_LACPL 19 19
IIGQAAEFDYSGTQG CARY_BACSU 19 19
SIGQAGEFDYSGSQA Q27448 513 513
CIGQAGEFDYSGTQA Q27732 702 702
SIGQAGEFDYSGSQA PYR1_DROME 420 420
VIGQACEFDYSGTQS O25577 19 19
VIGQACEFDYSGAQA Q59599 19 19
IIGQAAEFDYAGTEA O32771 19 19
KIAEAAEFDYSGSQA CARB_SULSO 17 17
RIGQGIEFDYSSVHA Q58776 96 96
RIGQGIEFDYACVHA O67233 14 14
RIGQGIEFDYCCVHA O27077 324 324
CPSASE2 Length of motif = 11 Motif number = 2
CPSase motif II - 4
PCODE ST INT
NPNIATVQTSK PYR1_SQUAC 437 14
NPNIATVQTSQ PYR1_MESAU 434 14
NPNIATIQTSK PYR1_YEAST 479 14
NPNIATIQTSK PYR1_SCHPO 515 14
NPNIASVQTNE Q92115 464 14
NPNIATVQTSP PYR1_DICDI 406 14
NPNIATVQTSQ PYR1_HUMAN 434 14
NPNIATVQTSK Q18990 431 14
NPNIATIQTSH CARB_TRICU 116 14
NPNIASVQTNE P70087 461 14
NPNIASVQTNE CPSM_HUMAN 463 14
NPNIASVQTNE CPSM_RANCA 460 14
NSNPATIMTDP O28994 48 14
NPNIASVQTNE CPSM_RAT 463 14
NPNIATNQTSH CARB_YEAST 69 14
NSNPATIMTDP O67869 48 14
NPNIASVQTNE O42433 464 14
NSNPATIMTDP Q42601 139 14
NPNIATVQTDD O15829 413 14
NSNPATIMTDT CARB_BACCL 48 14
NSNPATIMTDP Q51430 48 14
NPNIATVQTDD O15830 414 14
NSNPATIMTDT CARB_BACSU 48 14
NSNPATIMTDP P96495 48 14
NSNPASIMTDP Q55756 72 14
NSNPATIMTDP CARB_SALTY 47 14
NSNPATIMTDP CARB_ECOLI 47 14
NSNPATIMTDP O50236 48 14
NSNPATIMTDT O50302 48 14
NSNPATIMTDK CARB_LACPL 48 14
NSNPATIMTDE CARY_BACSU 48 14
NPNVATVQTNH Q27448 542 14
NPNIATVQTSK Q27732 731 14
NPNIATVQTSK PYR1_DROME 449 14
NSNPATVMTDP O25577 48 14
NSNPATIMTDP Q59599 48 14
NSNPATIMTDR O32771 48 14
NSNVATVQTSK CARB_SULSO 46 14
NNNPETVSTDY Q58776 125 14
NCNPETVSTDY O67233 43 14
NNNPETVSTDY O27077 353 14
CPSASE3 Length of motif = 13 Motif number = 3
CPSase motif III - 4
PCODE ST INT
VRAAFALGGLGSG PYR1_SQUAC 557 109
VRAAFALGGLGSG PYR1_MESAU 554 109
VRAAYALGGLGSG PYR1_YEAST 597 107
VRAAYALGGLGSG PYR1_SCHPO 633 107
VRAAYALGGLGSG Q92115 587 112
VRAAYCLGGLGSG PYR1_DICDI 526 109
VRAAFAVGGLGSG PYR1_HUMAN 554 109
VRAAYALGGLGSG Q18990 551 109
LRSAFSLGGLGSF CARB_TRICU 236 109
LRSAYSLGGLGSG P70087 584 112
IRSAYALGGLGSG CPSM_HUMAN 586 112
IRSAYALGGLGSG CPSM_RANCA 583 112
VRPAFTLGGTGGG O28994 168 109
IRSAYALGGLGSG CPSM_RAT 586 112
VRSAYALGGLGSG CARB_YEAST 189 109
LRPAFTLGGTGSS O67869 168 109
LRSAYALGPLGSG O42433 587 112
IRPAFTLGGTGGG Q42601 260 110
VRAAYCLGGQGSG O15829 533 109
VRPAFTLGGTGGG CARB_BACCL 168 109
IRPSFTMGGTGGG Q51430 168 109
LRAAYCLGGQGSG O15830 534 109
VRPAYTLGGTGGG CARB_BACSU 168 109
VRPSFTLGGTGGG P96495 168 109
IRPAFTLAGTGGG Q55756 193 110
IRPSFTMGGTGGG CARB_SALTY 167 109
IRPSFTMGGSGGG CARB_ECOLI 167 109
IRPSFTMGGTGGG O50236 167 108
VRPAFTLGGTGGG O50302 168 109
VRPAFTMGGTGGG CARB_LACPL 168 109
IRPAYTLGGKGGG CARY_BACSU 168 109
VRTNYALGGFGSG Q27448 661 108
VRTTFSLGGLNSS Q27732 851 109
ARAAFSLGGLGSG PYR1_DROME 568 108
IRASFTLAGGGSG O25577 166 107
IRPSFTMGGSGGG Q59599 168 109
VGPAFTMGGTGGG O32771 168 109
VRVSFNLGGRGSM CARB_SULSO 166 109
VRPSYVLGGRAMQ Q58776 243 107
VRPSYVLGGRAMR O67233 157 103
VRPSYVLGGRAME O27077 467 103
CPSASE4 Length of motif = 20 Motif number = 4
CPSase motif IV - 4
PCODE ST INT
ILVDKSLKGWKEIEYEVVRD PYR1_SQUAC 591 21
VLIDKSLKGWKEIEYEVVRD PYR1_MESAU 588 21
VLVEKSMKGWKEVEYEVVRD PYR1_YEAST 631 21
VLIERSMKGWKEIEYEVVRD PYR1_SCHPO 667 21
ILVEQSLLGWKEVEYEVVRD Q92115 621 21
VLVEKSLKGWKEIEYEVLRD PYR1_DICDI 560 21
VLVDKSLKGWKEIEYEVVRD PYR1_HUMAN 588 21
VLVDKSLKGWKEVEYEVVRD Q18990 585 21
VLIEKSLKGWKEVEYEVVRD CARB_TRICU 269 20
ILVEKSLMGWKEVEYEVVRD P70087 618 21
ILVEKSVTGWKEIEYEVVRD CPSM_HUMAN 620 21
ILVERSVVGWKEIEYEVVRD CPSM_RANCA 617 21
VLIEEGVLGWKEFELEVMRD O28994 204 23
ILVERSVTGWKEIEYEVVRD CPSM_RAT 620 21
ILVEKSLKGWKEVEYEVVRD CARB_YEAST 223 21
VLLDKSLIGWKEIEFEVVRD O67869 204 23
ILVEKSLMGWKEVEYEVVRD O42433 621 21
VLVEKSLLGWKEYELEVMRD Q42601 296 23
VLLEESVAGWKEIEYEVVRD O15829 567 21
CLLERSIAGYKEIEYEVMRD CARB_BACCL 204 23
LLIDESLIGWKEYEMEVVRD Q51430 204 23
VLLEESVAGWKEVEYEVVRD O15830 568 21
CLLEKSIAGYKEIEYEVMRD CARB_BACSU 204 23
ALVEESVLGWKEFELEVMRD P96495 204 23
ILVEKSLLGWKEYELEVMRD Q55756 229 23
LLIDESLIGWKEYEMEVVRD CARB_SALTY 203 23
LLIDESLIGWKEYEMEVVRD CARB_ECOLI 203 23
VLIEESVIGWKEYEMEVVRD O50236 203 23
CLLERSIAGYNQIEYEVMRD O50302 204 23
VLIEQSIAGYKEIEFEVMRD CARB_LACPL 204 23
CLVEKSIAGFKEIEYEVMRD CARY_BACSU 204 23
VYIDKALKGWKEIEFEIIRD Q27448 717 43
IFIDKSLQGWKEIEYELLRD Q27732 886 22
LIVDKSLKGWKEVEYEVVRA PYR1_DROME 602 21
ILIEESLLGWKEYEMEVIRD O25577 202 23
LLIEQSVLGWKEYEMEVVRD Q59599 204 23
CLIEESIAGYKEIEYEVMRD O32771 204 23
VLLEKYLYHWIELEYEVMRD CARB_SULSO 202 23
VLIDKFLEDAIELDVDAVCD Q58776 279 23
VLIDKFLDNSIELDVDAVSD O67233 193 23
ILVDKFLEDAIEVDVDALCD O27077 503 23
CPSASE5 Length of motif = 18 Motif number = 5
CPSase motif V - 4
PCODE ST INT
PLGIHTGESIVVAPSQTL PYR1_SQUAC 626 15
PLGIHTGESIVVAPSQTL PYR1_MESAU 623 15
PLGIHTGDSIVVAPSQTL PYR1_YEAST 666 15
PLGIHTGDSIVVAPSQTL PYR1_SCHPO 702 15
PLGIHTGDSVVVAPSQTL Q92115 656 15
PLGIHTGESIVVAPSQTL PYR1_DICDI 595 15
PLGIHTGESIVVAPSQTL PYR1_HUMAN 623 15
PLGIHTGESVVVAPSQTL Q18990 620 15
PLGTHTGDSIVVAPSQTL CARB_TRICU 304 15
PLGIHTGDSIVVAPSQTL P70087 653 15
AMGVHTGDSVVVAPAQTL CPSM_HUMAN 655 15
AMGVHTGDSIVVAPCQTL CPSM_RANCA 652 15
PMGVHTGDSITVAPAQTL O28994 239 15
AMGVHTGDSVVVAPAQTL CPSM_RAT 655 15
PLGVHTGDSMVFAPSQTL CARB_YEAST 258 15
PMGVHTGDSITVAPTQTL O67869 239 15
PLGIHTGDSIVVAPSQTL O42433 656 15
PMGVHTGDSITVAPAQTL Q42601 331 15
PMGVHTGESIVVAPSQTL O15829 602 15
PVGIHTGDSIVVAPSQTL CARB_BACCL 239 15
PMGVHTGDSITVAPAQTL Q51430 239 15
PMGTHTGESIVVAPLQTL O15830 603 15
PVGIHTGDSIVVAPSQTL CARB_BACSU 239 15
PMGVHTGDSITVAPAQTL P96495 239 15
PMGVHTGDSITVAPAQTL Q55756 264 15
AMGIHTGDSITVAPAQTL CARB_SALTY 238 15
AMGIHTGDSITVAPAQTL CARB_ECOLI 238 15
PMGVHTGDSITVAPALTM O50236 238 15
PVGIHTGDSIVVAPSQTL O50302 239 15
PVGIHTGDSIVYAPVQTL CARB_LACPL 239 15
PVGVHTGDSIVVAPSQTL CARY_BACSU 239 15
PLGIHTGDSIVVAPAQTL Q27448 752 15
PLGIHTGDSIVVAPSQTL Q27732 921 15
PLGIHTGESIVVAPSQTL PYR1_DROME 638 16
PMGVHTGDSITIAPSLTL O25577 237 15
PMGVHTGDSITVAPAETL Q59599 239 15
PVGVHTGDSIVFAPSQTL O32771 239 15
PMGVHTGESTVVAPCQTL CARB_SULSO 237 15
EAGVHSGDSATVIPPQTL Q58776 313 14
EAGVHSGDSATSIPPYSL O67233 227 14
EAGVHSGDSACVIPPQSI O27077 537 14
CPSASE6 Length of motif = 30 Motif number = 6
CPSase motif VI - 4
PCODE ST INT
IIEVNARLSRSSALASKATGYPLAYVAAKL PYR1_SQUAC 683 39
IIEVNARLSRSSALASKATGYPLAYVAAKL PYR1_MESAU 680 39
IIEVNARLSRSSALASKATGYPLAYTAAKL PYR1_YEAST 723 39
IIEVNARLSRSSALASKATGYPLAFTAAKL PYR1_SCHPO 759 39
IIEVNARLSRSSALASKATGYPLAFVAAKL Q92115 713 39
IIEVNARLSRSSALASKATGYPLAFISAKV PYR1_DICDI 652 39
IIEVNARLSRSSALASKATGYPLAYVAAKL PYR1_HUMAN 680 39
IIEVNARLSRSSALASKATGYPLAYVAAKL Q18990 677 39
VIEMNARLSRSSALASKATGYPLAYTAAKI CARB_TRICU 360 38
IIEVNARLSRSSALASKATGYPLAFVAAKL P70087 710 39
IIEVNARLSRSSALASKATGYPLAFIAAKI CPSM_HUMAN 712 39
IIEVNARLSRSSALASKATGYPLAFIAAKI CPSM_RANCA 709 39
AIEMNPRVSRSSALASKATGFPIAKIAAKL O28994 297 40
IIEVNARLSRSSALASKATGYPLAFIAAKI CPSM_RAT 712 39
VIEVNARLSRSSALASKATGYPLAYTAAKI CARB_YEAST 315 39
VIEMNPRVSRSSALASKATGFPIAKVAAKL O67869 297 40
IIEVNARLSRSSALASKATGYPLAFVAAKL O42433 713 39
IIEMNPRVSRSSALASKATGFPIAKMAAKL Q42601 389 40
VIEVNARLSRSSALASKATGYPLAHVATKI O15829 659 39
VIEVNPRVSRSSALASKATGYPIAKLAAKI CARB_BACCL 296 39
VIEMNPRVSRSSALASKATGFPIAKIAAKL Q51430 297 40
VIEVNARLSRSSALASKATGYPLALVAAKI O15830 660 39
IIEVNPRVSRSSALASKATGYPIAKLAAKI CARB_BACSU 296 39
VIEMNPRVSRSSALASKATGFPIAKIAALL P96495 297 40
VIEMNPRVSRSSALASKATGFPIAKFAAKL Q55756 322 40
VIEMNPRVSRSSALASKATGFPIAKVAAKL CARB_SALTY 296 40
VIEMNPRVSRSSALASKATGFPIAKVAAKL CARB_ECOLI 296 40
VIEMNPRVSRSSALASKATGFPIAKVATKL O50236 296 40
VIEVNPRVSRSSALASKATGYPIAKLAAKI O50302 296 39
IIEVNPRVSRSSALASKATGYPIAKMAAKI CARB_LACPL 296 39
VIEVNPRVSRSSALASKATGYPIAKMAAKL CARY_BACSU 296 39
IVELNARLSRSSALASKATGYPLAYFAARI Q27448 809 39
IIEVNARLSRSSALASKATGYPLAYISAKI Q27732 978 39
IIEVNERLSRTSALASKAPGYPLAYVAAKV PYR1_DROME 694 38
VIEMNPRVSRSSALASKATGFPIAKVATML O25577 295 40
DRDEPAAVSRSSALASKATGFPIAKVAANW Q59599 298 41
VIEVNPRVSRSSALASKATGYPIAKMSAKI O32771 296 39
IIETNPRMSRSSALASKATGYPLAYVSAKL CARB_SULSO 294 39
VLEANPRASRTVPYVSKSVGIPLAKLATKI Q58776 368 37
VLEVNPRASRTVPFVSKSIGYPLAKIATKV O67233 282 37
ILEANPRASRTVPFVSKATGVPLAKMAARL O27077 595 40
CPSASE7 Length of motif = 19 Motif number = 7
CPSase motif VII - 4
PCODE ST INT
SVGEVMAIGRNFEEAFQKA PYR1_SQUAC 765 49
SVGEVMGIGRSFEEAFQKA PYR1_MESAU 761 48
SVGEVMSIGRTFEEAIQKA PYR1_YEAST 805 49
SVGEVMSIGRTFEEAIQKA PYR1_SCHPO 841 49
SVGEVMAIGRTFEESFQKA Q92115 795 49
SVGEVMSIGRKFEEAIQKA PYR1_DICDI 734 49
SVGEVMGIGRSFEEAFQKA PYR1_HUMAN 761 48
SVGEVMGIGRCFEEALQKA Q18990 759 49
SVGEVMAIGRTFEESLQKA CARB_TRICU 442 49
SVGEVMAVGRTFEESMQKA P70087 792 49
SVGEVMAIGRTFEESFQKA CPSM_HUMAN 794 49
SVGEVMAIGRTFEESFQKA CPSM_RANCA 791 49
SVGEVMAVGRTFEEALQKA O28994 379 49
SVGEVMAIGRTFEESFQKA CPSM_RAT 794 49
SVGEVMAIGRNYEEAFQKA CARB_YEAST 397 49
SVGEVMAIGRTFKEALLKA O67869 379 49
SVGEVMAVGRTFEESMQKA O42433 795 49
SVGESMALGRTFQESFQKA Q42601 471 49
SVGEVMSIGRTFEEAMQKA O15829 741 49
ATGEVMAIGRTFEESLLKA CARB_BACCL 378 49
SVGEVMAIGRTFQESVQKA Q51430 380 50
SVGEVMAIGRTFEEALQKA O15830 742 49
ATGEVMAIGRTLEESLLKA CARB_BACSU 378 49
SVGEVMAIGRTFKEALMKA P96495 386 56
SVGEAMAIGRTFQESFQKA Q55756 404 49
SVGEVMAIGRTQQESLQKA CARB_SALTY 379 50
SVGEVMAIGRTQQESLQKA CARB_ECOLI 379 50
SVGEVMAIGRSFPESLQKA O50236 378 49
ATGEVMSIGRTFEESLLKA O50302 378 49
ATGEVMAIGRNIEEATLKA CARB_LACPL 378 49
ATGEVMAIERNLEAAIQKA CARY_BACSU 378 49
SVGEVMSIGRTFEEAMQKA Q27448 891 49
SVGEVMSIGRTFEESIQKS Q27732 1060 49
SVGEVMAIGRQLRGSVPKS PYR1_DROME 776 49
SIGEVMAIGGNFLEALQKA O25577 376 48
SVGEVMAMGRTIQESFQKA Q59599 381 50
ATGEVMAIGRNIEESLLKA O32771 378 49
SVGEVMSIGRSFEESLQKA CARB_SULSO 376 49
STGEAIGIDKDFGRAYYKA Q58776 452 51
STGEVMGIDKEFGLAYYKA O67233 372 57
STGEAMGIDENFGIAYYKS O27077 669 41
User query: Display/Full Code "CPSASE"