WORKLIST ENTRIES (1):
AMPBINDING View alignment View Structure AMP-binding signature
Type of fingerprint: COMPOUND with 2 elements
Links:
INTERPRO; IPR000873
PROSITE; PS00455 AMP_BINDING
PFAM; PF00501 AMP-binding
Creation date 21-JUL-1991; UPDATE 22-JUN-1999
1. SMITH, D.J., EARL, A.J. AND TURNER, G.
The multifunctional peptide synthetase performing the first step of
penicillin biosynthesis in Penicillin chrysogenum is a 421 073 dalton
protein similar to Bacillus brevis peptide antibiotic synthetases.
EMBO J. 9 2743-2750 (1990).
2. SCHROEDER, J.
Protein sequence homology between plant 4-coumarate:CoA ligase and
firefly luciferase.
NUCLEIC ACIDS RES. 17 460-460 (1989).
3. MALLONEE, D.H., WHITE, W.B. AND HYLEMON, P.B.
Cloning and sequencing of a bile acid-inducible operon from
Eubacterium sp. strain VPI 12708.
J.BACTERIOL. 172 7011-7019 (1990).
4. FARRELL, D.H., MIKESELL, P., ACTIS, L.A. AND CROSA, J.H.
A regulatory gene, angR, of the iron uptake system of Vibrio anguillarum:
similarity with phage P22 cro and regulation by iron.
GENE 86 45-51 (1990).
A number of prokaryotic and eukaryotic enzymes, which appear to act via an
ATP-dependent covalent binding of AMP to their substrate, share a region
of sequence similarity [1-3] - this region is a Ser/Thr/Gly-rich domain
that is further characterised by a conserved Pro-Lys-Gly triplet. The
family of enzymes includes luciferase, long chain fatty acid Co-A ligase,
acetyl-CoA synthetase and various other closely related synthetases.
AMPBINDING is a 2-element fingerprint that provides a signature for the
STG-rich domain of AMP-binding proteins. The fingerprint was derived from
an initial alignment of 7 sequences: the motifs span the STG-rich domain,
motif 2 including the PKG triplet (cf. PROSITE pattern AMP_BINDING
(PS00455)). Two iterations on OWL11.0 were required to reach convergence,
at which point a true set comprising 13 sequences was identified, including
the ORA octapeptide-repeat antigen, and angR, a Vibrio anguillarum protein
believed to be a transcriptional activator [4]. On the basis of the
presence of this AMP-binding domain, however, together with other
indicators, it is thought that angR may be an enzyme involved in
anguibactin biosynthesis (see PROSITE pattern AMP_BINDING).
An update on SPTR37_9f identified a true set of 157 sequences.
SUMMARY INFORMATION
157 codes involving 2 elements
COMPOSITE FINGERPRINT INDEX
2| 157 157
--+-----------
| 1 2
True positives..
O30409 Q44928 GRSB_BACBR ACVS_EMENI
O30408 O68006 O68008 Q45675
SRF2_BACSU PKSK_BACSU O85740 O68007
O31827 P94460 Q45563 O69246
O66070 O30981 O31783 ACVS_CEPAC
O66069 Q45295 SRF1_BACSU P94459
O30980 O85168 PPS2_BACSU Q09164
Q18660 P73004 O87606 O52819
DHBF_BACSU O52820 O30407 TYCA_BACBR
O52821 PPS1_BACSU ANGR_VIBAN O87704
HMP2_YEREN O52803 O87314 O69826
ACVS_PENCH ACVT_PENCH Q50857 Q54959
O51162 GRSA_BACBR O51539 O07944
Q52400 Q96337 O23268 LCFH_HAEIN
O69825 O86329 O68487 Q63151
LCF4_YEAST O54154 Q00869 Q51338
P71076 P71077 ENTF_ECOLI O85077
Q04414 Q52531 ACSA_EMENI ACSA_PENCH
O85739 O67119 O13440 O68040
O68576 O27640 Q94598 O26319
ACSA_ECOLI DLTA_LACCA O67872 O29287
Q20121 LCF1_YEAST Q55404 O33743
O33459 DLTA_BACSU O07610 Q96338
O85019 O87313 O25686 O49063
Q50017 ACSA_NEUCR Q24226 LCFD_HUMAN
LCFD_RAT Q50858 O83181 P71717
O34837 MENE_BACSU O53306 ACSA_ALCEU
HTS1_COCCA ACS1_YEAST Q27549 P94903
O34613 LCFH_MYCTU Q10896 O30039
SID2_USTMA Q21872 Q21873 LCFB_HUMAN
LCFA_HUMAN Q96537 ACVS_NOCLA O15840
O05295 O30147 O81614 Q96538
ACS1_KLULA O07411 Q94597 PRPE_SALTY
PRPE_ECOLI O60135 Q53661 LCFB_MOUSE
O05819 ACS2_YEAST LCFB_RAT O30479
Q18496 Q20264 O16775 O76858
O53406 Q54297 O69635 O29881
O54666 O54155 PKSJ_BACSU YDID_ECOLI
O28762 O16481 LCFE_RAT Q01135
CAIC_ECOLI
PROTEIN TITLES
O30409 TYROCIDINE SYNTHETASE III [INCLUDES: ATP-DEPENDENT ASPARAGIN
Q44928 GRAMICIDIN S SYNTHETASE 2 - BACILLUS BREVIS.
GRSB_BACBR GRAMICIDIN S SYNTHETASE II [INCLUDES: ATP-DEPENDENT PROLINE
ACVS_EMENI DELTA-(L-ALPHA-AMINOADIPYL)-L-CYSTEINYL-D-VALINE SYNTHETASE
O30408 TYROCIDINE SYNTHETASE II [INCLUDES: ATP-DEPENDENT PROLINE AD
O68006 BACITRACIN SYNTHETASE 1 (BA1) [INCLUDES: ATP-DEPENDENT ISOLE
O68008 BACITRACIN SYNTHETASE 3 (BA3) [INCLUDES: ATP-DEPENDENT ISOLE
Q45675 SURFACTIN SYNTHETASE - BACILLUS SUBTILIS.
SRF2_BACSU SURFACTIN SYNTHETASE SUBUNIT 2 - BACILLUS SUBTILIS.
PKSK_BACSU PUTATIVE POLYKETIDE SYNTHASE PKSK (PKS) - BACILLUS SUBTILIS.
O85740 PYOCHELIN SYNTHETASE - PSEUDOMONAS AERUGINOSA.
O68007 BACITRACIN SYNTHETASE 2 (BA2) [INCLUDES: ATP-DEPENDENT LYSIN
O31827 PEPTIDE SYNTHETASE - BACILLUS SUBTILIS.
P94460 PEPTIDE SYNTHETASE ORF5 - BACILLUS SUBTILIS.
Q45563 FENGYCIN SYNTHETASE - BACILLUS SUBTILIS.
O69246 LCHAB PROTEIN - BACILLUS LICHENIFORMIS.
O66070 LICHENYSIN SYNTHETASE B - BACILLUS LICHENIFORMIS.
O30981 FENGYCIN SYNTHETASE FENE - BACILLUS SUBTILIS.
O31783 POLYKETIDE SYNTHASE OF TYPE I - BACILLUS SUBTILIS.
ACVS_CEPAC DELTA-(L-ALPHA-AMINOADIPYL)-L-CYSTEINYL-D-VALINE SYNTHETASE
O66069 LICHENYSIN SYNTHETASE A - BACILLUS LICHENIFORMIS.
Q45295 FIRST SUBUNIT OF LICHENYSIN SYNTHETASE - BACILLUS LICHENIFOR
SRF1_BACSU SURFACTIN SYNTHETASE SUBUNIT 1 - BACILLUS SUBTILIS.
P94459 PEPTIDE SYNTHETASE ORF4 - BACILLUS SUBTILIS.
O30980 FENGYCIN SYNTHETASE FENA - BACILLUS SUBTILIS.
O85168 SYRINGOMYCIN SYNTHETASE - PSEUDOMONAS SYRINGAE (PV. SYRINGAE
PPS2_BACSU PEPTIDE SYNTHETASE 2 - BACILLUS SUBTILIS.
Q09164 CYCLOSPORIN SYNTHETASE (CYSYN) (EC 6.-.-.-) - TOLYPOCLADIUM
Q18660 SIMILAR TO LONG-CHAIN-FATTY-ACID COA LIGASE. NCBI GI: 104940
P73004 LONG-CHAIN-FATTY-ACID COA LIGASE - SYNECHOCYSTIS SP. (STRAIN
O87606 PEPTIDE SYNTHETASE - BACILLUS SUBTILIS.
O52819 PCZA363.3 - AMYCOLATOPSIS ORIENTALIS.
DHBF_BACSU PROBABLE SERINE ACTIVATING ENZYME - BACILLUS SUBTILIS.
O52820 PCZA363.4 - AMYCOLATOPSIS ORIENTALIS.
O30407 TYROCIDINE SYNTHETASE I [INCLUDES: ATP-DEPENDENT D-PHENYLALA
TYCA_BACBR TYROCIDINE SYNTHETASE I [INCLUDES: ATP-DEPENDENT D-PHENYLALA
O52821 PCZA363.5 - AMYCOLATOPSIS ORIENTALIS.
PPS1_BACSU PEPTIDE SYNTHETASE 1 - BACILLUS SUBTILIS.
ANGR_VIBAN ANGR PROTEIN - VIBRIO ANGUILLARUM.
O87704 FENGYCIN SYNTHETASE - BACILLUS SUBTILIS.
HMP2_YEREN HIGH-MOLECULAR-WEIGHT PROTEIN 2 (HMWP2) - YERSINIA ENTEROCOL
O52803 PCZA361.18 - AMYCOLATOPSIS ORIENTALIS.
O87314 FXBC - MYCOBACTERIUM SMEGMATIS.
O69826 PEPTIDE SYNTHASE - STREPTOMYCES COELICOLOR.
ACVS_PENCH DELTA-(L-ALPHA-AMINOADIPYL)-L-CYSTEINYL-D-VALINE SYNTHETASE
ACVT_PENCH DELTA-(L-ALPHA-AMINOADIPYL)-L-CYSTEINYL-D-VALINE SYNTHETASE
Q50857 SAFRAMYCIN MX1 SYNTHETASE B - MYXOCOCCUS XANTHUS.
Q54959 PRISTINAMYCIN I SYNTHASE I - STREPTOMYCES PRISTINAESPIRALIS.
O51162 LONG-CHAIN-FATTY-ACID COA LIGASE - BORRELIA BURGDORFERI (LYM
GRSA_BACBR GRAMICIDIN S SYNTHETASE I [INCLUDES: ATP-DEPENDENT D-PHENYLA
O51539 LONG-CHAIN-FATTY-ACID COA LIGASE - BORRELIA BURGDORFERI (LYM
O07944 PRISTINAMYCIN I SYNTHASE 3 AND 4 - STREPTOMYCES PRISTINAESPI
Q52400 SYRINGOMYCIN BIOSYNTHESIS ENZYME - PSEUDOMONAS SYRINGAE.
Q96337 AMP-BINDING PROTEIN - BRASSICA NAPUS (RAPE).
O23268 A6 ANTHER-SPECIFIC PROTEIN - ARABIDOPSIS THALIANA (MOUSE-EAR
LCFH_HAEIN PUTATIVE LONG-CHAIN-FATTY-ACID--COA LIGASE (EC 6.2.1.3) (LON
O69825 PEPTIDE SYNTHASE - STREPTOMYCES COELICOLOR.
O86329 MBTE - MYCOBACTERIUM TUBERCULOSIS.
O68487 ACTINOMYCIN SYNTHETASE II - STREPTOMYCES CHRYSOMALLUS.
Q63151 BRAIN ACYL-COA SYNTHTASE II - RATTUS NORVEGICUS (RAT).
LCF4_YEAST LONG-CHAIN-FATTY-ACID--COA LIGASE 4 (EC 6.2.1.3) (LONG-CHAIN
O54154 PEPTIDE SYNTHASE - STREPTOMYCES COELICOLOR.
Q00869 ENNIATIN SYTHETASE - FUSARIUM SCIRPI.
Q51338 PYOVERDINE SYNTHETASE D - PSEUDOMONAS AERUGINOSA.
P71076 YUKL PROTEIN - BACILLUS SUBTILIS.
P71077 YUK[A,B,C,D,E,F], YUK[I,J,K,L,M] AND ALD GENES - BACILLUS SU
ENTF_ECOLI ENTEROBACTIN SYNTHETASE COMPONENT F (ENTEROCHELIN SYNTHASE F
O85077 4-CHLOROBENZOATE COA LIGASE - ARTHROBACTER SP.
Q04414 PUTATIVE BENZOATE--COA LIGASE (EC 6.2.1.25) (4-CBA-COA LIGAS
Q52531 BIOSYNTHETIC PROTEIN C - PSEUDOMONAS SP.
ACSA_EMENI ACETYL-COENZYME A SYNTHETASE (EC 6.2.1.1) (ACETATE--COA LIGA
ACSA_PENCH ACETYL-COENZYME A SYNTHETASE (EC 6.2.1.1) (ACETATE--COA LIGA
O85739 DIHYDROAERUGINOIC ACID SYNTHETASE - PSEUDOMONAS AERUGINOSA.
O67119 LONG-CHAIN-FATTY-ACID COA LIGASE - AQUIFEX AEOLICUS.
O13440 ACETATE--COA LIGASE (EC 6.2.1.1) - COPRINUS CINEREUS (INKY C
O68040 ACETYL-COENZYME A SYNTHETASE (EC 6.2.1.1) - RHODOBACTER CAPS
O68576 D-ALANINE-D-ALANYL CARRIER PROTEIN LIGASE - STREPTOCOCCUS MU
O27640 ACETYL-COA SYNTHETASE - METHANOBACTERIUM THERMOAUTOTROPHICUM
Q94598 LCFACAS4 - LEISHMANIA MAJOR.
O26319 ACETYL-COA SYNTHETASE - METHANOBACTERIUM THERMOAUTOTROPHICUM
ACSA_ECOLI ACETYL-COENZYME A SYNTHETASE (EC 6.2.1.1) (ACETATE--COA LIGA
DLTA_LACCA D-ALANINE-ACTIVATING ENZYME (EC 6.3.2.-) (DAE) (D-ALANINE-D-
O67872 ACETYL-COENZYME A SYNTHETASE - AQUIFEX AEOLICUS.
O29287 ACETYL-COA SYNTHETASE (ACS-4) - ARCHAEOGLOBUS FULGIDUS.
Q20121 COSMID F37C12 - CAENORHABDITIS ELEGANS.
LCF1_YEAST LONG-CHAIN-FATTY-ACID--COA LIGASE 1 (EC 6.2.1.3) (LONG-CHAIN
Q55404 ACETYL-COENZYME A SYNTHETASE - SYNECHOCYSTIS SP. (STRAIN PCC
O33743 STREPTOTHRICIN PEPTIDE SYNTHASE - STREPTOMYCES SP.
O33459 ACETYL-COENZYME A SYNTHETASE - PSEUDOMONAS PUTIDA.
DLTA_BACSU D-ALANINE-ACTIVATING ENZYME (EC 6.3.2.-) (DAE) (D-ALANINE-D-
O07610 HYPOTHETICAL 56.6 KD PROTEIN - BACILLUS SUBTILIS.
Q96338 AMP-BINDING PROTEIN - BRASSICA NAPUS (RAPE).
O85019 FXBB - MYCOBACTERIUM SMEGMATIS.
O87313 FXBB - MYCOBACTERIUM SMEGMATIS.
O25686 ACETYL-COA SYNTHETASE (ACOE) - HELICOBACTER PYLORI (CAMPYLOB
O49063 ACETYL-COA SYNTHETASE (EC 6.2.1.1) (ACETATE--COA LIGASE) (AC
Q50017 XCLC - MYCOBACTERIUM LEPRAE.
ACSA_NEUCR ACETYL-COENZYME A SYNTHETASE (EC 6.2.1.1) (ACETATE--COA LIGA
Q24226 ACETYL-COENZYME A SYNTHETASE (EC 6.2.1.1) (ACETATE--COA LIGA
LCFD_HUMAN LONG-CHAIN-FATTY-ACID--COA LIGASE 4 (EC 6.2.1.3) (LONG-CHAIN
LCFD_RAT LONG-CHAIN-FATTY-ACID--COA LIGASE 4 (EC 6.2.1.3) (LONG-CHAIN
Q50858 SAFRAMYCIN MX1 SYNTHETASE A - MYXOCOCCUS XANTHUS.
O83181 LONG-CHAIN-FATTY-ACID--COA LIGASE - TREPONEMA PALLIDUM.
P71717 HYPOTHETICAL 151.6 KD PROTEIN - MYCOBACTERIUM TUBERCULOSIS.
O34837 OSB-COA SYNTHASE - BACILLUS SUBTILIS.
MENE_BACSU O-SUCCINYLBENZOIC ACID--COA LIGASE (EC 6.2.1.26) (OSB-COA SY
O53306 PUTATUVE CHAIN -FATTY-ACID-COA LIGASE - MYCOBACTERIUM TUBERC
ACSA_ALCEU ACETYL-COENZYME A SYNTHETASE (EC 6.2.1.1) (ACETATE--COA LIGA
HTS1_COCCA HC-TOXIN SYNTHETASE (EC 6.3.2.-) (HTS) - COCHLIOBOLUS CARBON
ACS1_YEAST ACETYL-COENZYME A SYNTHETASE 1 (EC 6.2.1.1) (ACETATE--COA LI
Q27549 ACETYL-COA SYNTHETASE (EC 6.2.1.1) (ACETATE--COA LIGASE) (AC
P94903 ACETYL-COA SYNTHETASE - LYSOBACTER.
O34613 YTCI - BACILLUS SUBTILIS.
LCFH_MYCTU PUTATIVE LONG-CHAIN-FATTY-ACID--COA LIGASE (EC 6.2.1.3) (LON
Q10896 PROBABLE PEPTIDE SYNTHETASE CY251.20 - MYCOBACTERIUM TUBERCU
O30039 LONG-CHAIN-FATTY-ACID--COA LIGASE (FADD-2) - ARCHAEOGLOBUS F
SID2_USTMA FERRICHROME SIDEROPHORE PEPTIDE SYNTHETASE (EC 6.-.-.-) - US
Q21872 R09E10.3 PROTEIN - CAENORHABDITIS ELEGANS.
Q21873 R09E10.4 PROTEIN - CAENORHABDITIS ELEGANS.
LCFB_HUMAN LONG-CHAIN-FATTY-ACID--COA LIGASE 2 (EC 6.2.1.3) (LONG-CHAIN
LCFA_HUMAN LONG-CHAIN-FATTY-ACID--COA LIGASE 1 (EC 6.2.1.3) (LONG-CHAIN
Q96537 ACYL COA SYNTHETASE (EC 6.2.1.3) (LONG-CHAIN-FATTY-ACID--COA
ACVS_NOCLA DELTA-(L-ALPHA-AMINOADIPYL)-L-CYSTEINYL-D-VALINE SYNTHETASE
O15840 LCFACAS2 - LEISHMANIA MAJOR.
O05295 HYPOTHETICAL 49.5 KD PROTEIN - MYCOBACTERIUM TUBERCULOSIS.
O30147 LONG-CHAIN-FATTY-ACID--COA LIGASE (FADD-1) - ARCHAEOGLOBUS F
O81614 F8M12.15 PROTEIN - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).
Q96538 ACYL-COA SYNTHETASE (EC 6.2.1.3) (LONG-CHAIN-FATTY-ACID--COA
ACS1_KLULA ACETYL-COENZYME A SYNTHETASE 1 (EC 6.2.1.1) (ACETATE--COA LI
O07411 PROBABLE FATTY-ACID COA LIGASE - MYCOBACTERIUM TUBERCULOSIS.
Q94597 LCFACAS3 PROTEIN - LEISHMANIA MAJOR.
PRPE_SALTY PRPE PROTEIN - SALMONELLA TYPHIMURIUM.
PRPE_ECOLI PRPE PROTEIN - ESCHERICHIA COLI.
O60135 FATTY ACID COA LIGASE - SCHIZOSACCHAROMYCES POMBE (FISSION Y
Q53661 D-ALANINE-D-ALANYL CARRIER PROTEIN LIGASE - STAPHYLOCOCCUS A
LCFB_MOUSE LONG-CHAIN-FATTY-ACID--COA LIGASE 2 (EC 6.2.1.3) (LONG-CHAIN
O05819 HYPOTHETICAL 156.7 KD PROTEIN - MYCOBACTERIUM TUBERCULOSIS.
ACS2_YEAST ACETYL-COENZYME A SYNTHETASE 2 (EC 6.2.1.1) (ACETATE--COA LI
LCFB_RAT LONG-CHAIN-FATTY-ACID--COA LIGASE, LIVER ISOZYME (EC 6.2.1.3
O30479 PKS MODULE 1 - STREPTOMYCES HYGROSCOPICUS.
Q18496 C36A4.9 PROTEIN - CAENORHABDITIS ELEGANS.
Q20264 COSMID F41C3 - CAENORHABDITIS ELEGANS.
O16775 R07C3.4 PROTEIN - CAENORHABDITIS ELEGANS.
O76858 EBONY PROTEIN - DROSOPHILA MELANOGASTER (FRUIT FLY).
O53406 FATTY ACID COA-LIGASE - MYCOBACTERIUM TUBERCULOSIS.
Q54297 POLYKETIDE SYNTHASE - STREPTOMYCES HYGROSCOPICUS.
O69635 ACETYL-COENZYMEA SYNTHETASE - MYCOBACTERIUM TUBERCULOSIS.
O29881 ACETYL-COA SYNTHETASE (ACS-2) - ARCHAEOGLOBUS FULGIDUS.
O54666 POLYKETIDE SYNTHASE - AMYCOLATOPSIS MEDITERRANEI.
O54155 POLYKETIDE SYNTHASE - STREPTOMYCES COELICOLOR.
PKSJ_BACSU PUTATIVE POLYKETIDE BIOSYNTHESIS PROTEIN PKSJ - BACILLUS SUB
YDID_ECOLI HYPOTHETICAL 60.8 KD PROTEIN IN AROD-PPSA INTERGENIC REGION
O28762 LONG-CHAIN-FATTY-ACID--COA LIGASE (FADD-6) - ARCHAEOGLOBUS F
O16481 C50H11.1 PROTEIN - CAENORHABDITIS ELEGANS.
LCFE_RAT LONG-CHAIN-FATTY-ACID--COA LIGASE 5 (EC 6.2.1.3) (LONG-CHAIN
Q01135 PEPTIDE SYNTHETASE - METARHIZIUM ANISOPLIAE.
CAIC_ECOLI PROBABLE CROTONOBETAINE/CARNITINE-COA LIGASE (EC 6.3.2.-) -
SCAN HISTORY
OWL11_0 2 15 NSINGLE
OWL17_1 1 35 NSINGLE
OWL18_0 1 151 NSINGLE
OWL19_1 1 200 NSINGLE
OWL26_0 2 300 NSINGLE
SPTR37_9f 2 300 NSINGLE
INITIAL MOTIF SETS
AMPBINDING1 Length of motif = 12 Motif number = 1
Luciferase AMP-binding domain motif I - 1
PCODE ST INT
DDVVALPYSSGT 4CL_ORYSA 201 201
DDVVALPYSSGT 4CL1_PETCR 182 182
DDVVALPYSSGT 4CL2_PETCR 182 182
EDPLFLLYTSGS ACUA_ASPNI 274 274
EDPLFLLYTSGS ACUA_NEUCR 235 235
EQVALIMNSSGS LUCI_LUCCR 192 192
KTIALIMNSSGS LUCI_PHOPY 190 190
AMPBINDING2 Length of motif = 9 Motif number = 2
Luciferase AMP-binding domain motif II - 1
PCODE ST INT
TGLPKGVML 4CL_ORYSA 213 0
TGLPKGVML 4CL1_PETCR 194 0
TGLPKGVML 4CL2_PETCR 194 0
TGKPKGVMH ACUA_ASPNI 286 0
TGKPKGVAH ACUA_NEUCR 247 0
TGLPKGVQL LUCI_LUCCR 204 0
TGLPKGVAL LUCI_PHOPY 202 0
FINAL MOTIF SETS
AMPBINDING1 Length of motif = 12 Motif number = 1
Luciferase AMP-binding domain motif I - 2
PCODE ST INT
SDLAYIIYTSGT O30409 2679 2679
TDLAYIIYTSGT Q44928 3728 3728
TDLAYIIYTSGT GRSB_BACBR 3729 3729
TDLAYIIYTSGT ACVS_EMENI 1558 1558
SDLAYIIYTSGT O30408 2684 2684
GDLAYVIYTSGS O68006 2266 2266
DSLAYIIYTSGS O68008 5685 5685
SDLAYIMYTSGS Q45675 606 606
SDLAYIMYTSGS SRF2_BACSU 606 606
ENLAYVIYTSGS PKSK_BACSU 703 703
DDLAYVIYTSGS O85740 652 652
GDLAYVIYTSGT O68007 1690 1690
DDLAYIMYTSGS O31827 616 616
DDLAYIMYTSGS P94460 608 608
DDLAYIMYTSGS Q45563 609 609
EDLAYYIYTSGS O69246 604 604
EDLAYYIYTSGS O66070 605 605
HSLAYIIYTSGS O30981 1644 1644
EHLAYIIYTSGS O31783 56 56
SDLAYIMYTSGT ACVS_CEPAC 1506 1506
GHLAYIIYTSGT O66069 597 597
GHLAYIIYTSGT Q45295 597 597
RNLAYIIYTSGT SRF1_BACSU 599 599
HHLAYIIYTSGT P94459 2673 2673
QHLAYIIYTSGT O30980 2570 2570
RNLAYVIYTSGS O85168 2711 2711
GDLAYLIYTSGT PPS2_BACSU 607 607
TDLAYVIFTSGS Q09164 633 633
DDLAFIMYTSGT Q18660 290 290
EDLATLIYTSGT P73004 238 238
EDSAYIIYTSGT O87606 1640 1640
GDLAYVMYTSGS O52819 147 147
DHPAYIIYTSGS DHBF_BACSU 604 604
EDAAYVIYTSGS O52820 3611 3611
TDLAYVIYTSGT O30407 170 170
TDLAYVIYTSGT TYCA_BACBR 170 170
GDLAYVMYTSGS O52821 608 608
GSLAYVIYTSGS PPS1_BACSU 598 598
SQPAYIIYTSGS ANGR_VIBAN 593 593
DQPAYVIYTSGT O87704 1640 1640
TQPAYIIYTSGS HMP2_YEREN 704 704
DHPAYVIYTSGS O52803 150 150
DQPAYVIYTSGS O87314 3239 3239
DDLAYVIFTSGS O69826 686 686
TDLAYIIYTSGT ACVS_PENCH 1532 1532
TDLAYIIYTSGT ACVT_PENCH 1564 1564
EQLAYVLYTSGS Q50857 1316 1316
AHPAYVIYTSGS Q54959 577 577
NDMATIIYTSGT O51162 176 176
TDLAYVIYTSGT GRSA_BACBR 182 182
KDIATIIYTSGT O51539 183 183
AHPAYVIYTSGS O07944 1648 1648
NSTAYIIYTSGS Q52400 162 162
DDTAAIMYTSGT Q96337 250 250
DDTAAIMYTSGT O23268 250 250
SDLFTIIYTSGT LCFH_HAEIN 185 185
DALAFIFYTSGS O69825 143 143
DNTAYLIYTSGT O86329 568 568
DHPAYVIYTSGS O68487 609 609
SDIAVIMYTSGS Q63151 279 279
EDPACIMYTSGS LCF4_YEAST 262 262
GDLAALLYTSGS O54154 167 167
TSLAYVVFTSGS Q00869 1700 1700
DNLAYVIYTSGS Q51338 644 644
LNTAYVIYTSGS P71076 166 166
LNTAYVIYTSGS P71077 166 166
HHTAYIIFTSGS ENTF_ECOLI 595 595
EDPAFVFYTSGT O85077 153 153
EDPAFVFYTSGT Q04414 153 153
DSLAYVIYTSGS Q52531 458 458
EDPLFLLYTSGS ACSA_EMENI 274 274
EDPLFLLYTSGS ACSA_PENCH 274 274
QASAYVIYTSGS O85739 689 689
DDVAVLPYTSGT O67119 133 133
EDPLFILYTSGS O13440 262 262
EDPLFILYTSGS O68040 261 261
DDTYYIIFTSGT O68576 148 148
EDPLFILYTSGT O27640 267 267
DDLALIMYTSGT Q94598 279 279
EDPLFILYTSGS O26319 258 258
EDPLFILYTSGS ACSA_ECOLI 256 256
DDNYYIIFTSGT DLTA_LACCA 144 144
EDPLFILYTSGT O67872 257 257
NDAALLLYTSGT O29287 257 257
SDIALIMYTSGT Q20121 274 274
DDLCCIMYTSGS LCF1_YEAST 262 262
EDMLFILYTSGS Q55404 261 261
EDPAYMLFTSGS O33743 124 124
NDPSYLLYTSGT O33459 249 249
HETFYIIYTSGS DLTA_BACSU 143 143
DDTAVILYTSGT O07610 168 168
DDVATLCYTSGT Q96338 257 257
AQLAYVIFTSGS O85019 166 166
AQLAYVIFTSGS O87313 166 166
EDPLFLLYTSGS O25686 262 262
EDPLFLLYTSGS O49063 302 302
DATAMVIYTSGT Q50017 132 132
EDPLFLLYTSGS ACSA_NEUCR 235 235
EDPLFMLYTSGS Q24226 188 188
SDMAIVMYTSGS LCFD_HUMAN 229 229
SDMAIVMYTSGS LCFD_RAT 229 229
DHLAYLIYTSGS Q50858 1740 1740
ADVATIIFTSGT O83181 206 206
TALAYVLFTSGS P71717 690 690
DATATLMYTSGT O34837 144 144
DATATLMYTSGT MENE_BACSU 135 135
DDNLFIMYTSGT O53306 156 156
EHPLFVLYTSGS ACSA_ALCEU 262 262
NQAAYILFTSGS HTS1_COCCA 4273 4273
EDPLFLLYTSGS ACS1_YEAST 312 312
EDPLFYLYTSGS Q27549 292 292
NEPSYLLYTSGT P94903 233 233
DDMAFLSYTSGT O34613 172 172
EDIVTLIYTSGT LCFH_MYCTU 131 131
VNLAYILYTSGT Q10896 1631 1631
DDLASIVYTSGT O30039 164 164
DDVAFIIYTSGS SID2_USTMA 1541 1541
ETLATISFTSGT Q21872 276 276
ETLATISFTSGT Q21873 272 272
EDLAVICFTSGT LCFB_HUMAN 268 268
EDLAVICFTSGT LCFA_HUMAN 268 268
TDICTIMYTSGT Q96537 223 223
TDLAYAIYTSGT ACVS_NOCLA 1490 1490
ESVALIMYTSGT O15840 264 264
GAIAMVVYTSGT O05295 129 129
EDVALIPYTGGT O30147 178 178
SDICTIMYTSGT O81614 249 249
SDICTIMYTSGT Q96538 224 224
EHPLFLLYTSGS ACS1_KLULA 289 289
DSPALIMYTSGT O07411 183 183
DDVSLIMYTSGT Q94597 272 272
NETSCILYTSGT PRPE_SALTY 232 232
NETSCILYTSGT PRPE_ECOLI 232 232
EEICCIMYTSGS O60135 239 239
NDTVYTIFTSGS Q53661 33 33
EDLAIICFTSGT LCFB_MOUSE 269 269
DQAAYVIFTSGT O05819 598 598
EDPLFLLYTSGS ACS2_YEAST 270 270
EDLAIICFTSGT LCFB_RAT 269 269
DDIAWMLYTSGT O30479 163 163
EDPLFILYTSGS Q18496 287 287
SDPASVCYTSGT Q20264 209 209
ETLATISFTSGT O16775 258 258
DHTAIVLYTSGS O76858 183 183
NSAAAMCYTSGT O53406 177 177
DEPAWMLYTSGT Q54297 162 162
EHPLFLLYTSGT O69635 255 255
EDFSFILYTSGT O29881 275 275
DEPAWMFYTSGT O54666 159 159
RSLAFLQYTSGS O54155 190 190
EDLALLLLTSGS PKSJ_BACSU 187 187
DELAAVLFTSGT YDID_ECOLI 188 188
DDLALIPYTAGT O28762 193 193
SNAATICFTSGT O16481 177 177
EDLSVICFTSGT LCFE_RAT 253 253
DSAAFVVFTSGS Q01135 2771 2771
DDTAEILFTSGT CAIC_ECOLI 178 178
AMPBINDING2 Length of motif = 9 Motif number = 2
Luciferase AMP-binding domain motif II - 2
PCODE ST INT
TGKPKGVMV O30409 2691 0
TGKPKGVMI Q44928 3740 0
TGKPKGVMI GRSB_BACBR 3741 0
TGKPKGVMV ACVS_EMENI 1570 0
TGKPKGVML O30408 2696 0
TGKPKGVMI O68006 2278 0
TGKPKGVMI O68008 5697 0
TGKPKGVMI Q45675 618 0
TGKPKGVMI SRF2_BACSU 618 0
TGKPKGVMI PKSK_BACSU 715 0
TGTPKGVML O85740 664 0
TGNPKGVMV O68007 1702 0
TGRPKGVMI O31827 628 0
TGRPKGVMI P94460 620 0
TGRPKGVMI Q45563 621 0
TGRPKGVMV O69246 616 0
TGRPKGVMV O66070 617 0
TGKPKGVMI O30981 1656 0
TGEPKGVMV O31783 68 0
TGNPKGVMV ACVS_CEPAC 1518 0
TGRPKGVMI O66069 609 0
TGRPKGVMI Q45295 609 0
TGRPKGVMI SRF1_BACSU 611 0
TGRPKGVMV P94459 2685 0
TGQPKGVMV O30980 2582 0
TGNPKGVMI O85168 2723 0
TGRPKGVLV PPS2_BACSU 619 0
TGKPKGVMI Q09164 645 0
TGNPKGVMI Q18660 302 0
TGQPKGVML P73004 250 0
TGAPKGVIV O87606 1652 0
TGTPKGVAI O52819 159 0
TGRPKGVVV DHBF_BACSU 616 0
TGVPKGVLV O52820 3623 0
TGKPKGTML O30407 182 0
TGKPKGTML TYCA_BACBR 182 0
TGLPKGVAI O52821 620 0
TGQPKGVAV PPS1_BACSU 610 0
TGTPKGVVI ANGR_VIBAN 605 0
TGQPKGVVV O87704 1652 0
TGTPKGVVI HMP2_YEREN 716 0
TGQPKGVLV O52803 162 0
TGKPKGVVT O87314 3251 0
TGTPKGVAI O69826 698 0
TGRPKGVTV ACVS_PENCH 1544 0
TGRPKGVTV ACVT_PENCH 1576 0
TGQPKGVAI Q50857 1328 0
TGRPKGVVI Q54959 589 0
TGHPKGVML O51162 188 0
TGNPKGTML GRSA_BACBR 194 0
TGMPKGVML O51539 195 0
TGAPKGVVV O07944 1660 0
TGEPKGVQV Q52400 174 0
TGNPKGVML Q96337 262 0
TGNPKGVML O23268 262 0
TGEPKGVML LCFH_HAEIN 197 0
TGTPKGVML O69825 155 0
TGLPKGVAV O86329 580 0
TGVPKGVVN O68487 621 0
TGIPKGVMI Q63151 291 0
TGTPKGVVL LCF4_YEAST 274 0
TGTPKGVQI O54154 179 0
TGKPKGVMI Q00869 1712 0
TGKPKGTLL Q51338 656 0
TGVPKGVMI P71076 178 0
TGVPKGVMI P71077 178 0
TGRPKGVMV ENTF_ECOLI 607 0
TGLPKGVVI O85077 165 0
TGLPKGVVI Q04414 165 0
TGKPKGALL Q52531 470 0
TGKPKGVMH ACSA_EMENI 286 0
TGKPKGVMH ACSA_PENCH 286 0
TGVPKGVEV O85739 701 0
TGNPKGVML O67119 145 0
TGKPKGVVH O13440 274 0
TGKPKGVVH O68040 273 0
TGKPKGVQI O68576 160 0
TGKPKGVVH O27640 279 0
TGDPKGVMH Q94598 291 0
TGKPKGVLH O26319 270 0
TGKPKGVLH ACSA_ECOLI 268 0
TGKPKGVQI DLTA_LACCA 156 0
TGKPKGVLH O67872 269 0
TGKPKGVVL O29287 269 0
TGQPKGVIL Q20121 286 0
TGEPKGVVL LCF1_YEAST 274 0
TGKPKGVVH Q55404 273 0
TGEPKGVVV O33743 136 0
TGKPKGVQR O33459 261 0
TGNPKGVQI DLTA_BACSU 155 0
TGKPKGAML O07610 180 0
TGTPKGVVL Q96338 269 0
TGKPKGAMI O85019 178 0
TGKPKGAMI O87313 178 0
TGKPKGVQH O25686 274 0
TGKPKGVLH O49063 314 0
TGPPKGVLL Q50017 144 0
TGKPKGVAH ACSA_NEUCR 247 0
TGKPKGVLH Q24226 200 0
TGRPKGVMM LCFD_HUMAN 241 0
TGRPKGVMM LCFD_RAT 241 0
TGTPKAVML Q50858 1752 0
TGTPKGVVL O83181 218 0
TGEPKGVEV P71717 702 0
TGKPKGVQQ O34837 156 0
TGKPKGVQQ MENE_BACSU 147 0
TGHPKGVVH O53306 168 0
TGKPKGVQH ACSA_ALCEU 274 0
TGKPKGVVM HTS1_COCCA 4285 0
TGAPKGVQH ACS1_YEAST 324 0
TGTPKGVQH Q27549 304 0
TGKPKGVQR P94903 245 0
TGQPKGVVH O34613 184 0
TGNPKGVEM LCFH_MYCTU 143 0
TGEPKGVGI Q10896 1643 0
TGEPKGAML O30039 176 0
TGKPKGCLL SID2_USTMA 1553 0
TGRPKGVML Q21872 288 0
TGRPKGVML Q21873 284 0
TGNPKGAMV LCFB_HUMAN 280 0
TGNPKGAMV LCFA_HUMAN 280 0
TGEPKGVIL Q96537 235 0
TGKPKAVLV ACVS_NOCLA 1502 0
TGDPKGVMH O15840 276 0
TGPPKGVQL O05295 141 0
TGMPKGVML O30147 190 0
TGDPKGVMI O81614 261 0
TGDPKGVMI Q96538 236 0
TGAPKGVQH ACS1_KLULA 301 0
TGRPKGAVL O07411 195 0
TGGPKGVMH Q94597 284 0
TGKPKGVQR PRPE_SALTY 244 0
TGKPKGVQR PRPE_ECOLI 244 0
TGLPKGVIL O60135 251 0
TGEPKGVQI Q53661 45 0
TGNPKGAMI LCFB_MOUSE 281 0
TGTPKGVIG O05819 610 0
TGSPKGVVH ACS2_YEAST 282 0
TGNPKGAMV LCFB_RAT 281 0
TGRPKGVLS O30479 175 0
TGKPKGIQH Q18496 299 0
TGLPKGAIL Q20264 221 0
TGRPKGAML O16775 270 0
TGVPKGVRL O76858 195 0
TGNPKGVVY O53406 189 0
TGTPKGVLS Q54297 174 0
TGKPKGIMH O69635 267 0
TGRPKGAQH O29881 287 0
TGRPKGVVS O54666 171 0
TAAPKGVMV O54155 202 0
TGTPKAVML PKSJ_BACSU 199 0
EGLPKGVML YDID_ECOLI 200 0
TGLPKGCMH O28762 205 0
TGAPKGAVL O16481 189 0
TGDPKGAML LCFE_RAT 265 0
TGKPKGLVI Q01135 2783 0
TSRPKGVVI CAIC_ECOLI 190 0
User query: Display/Full Code "AMPBINDING"