WORKLIST ENTRIES (1):

AMPBINDING View alignment View Structure      AMP-binding signature
 Type of fingerprint: COMPOUND with 2  elements
Links:
   INTERPRO; IPR000873
   PROSITE; PS00455 AMP_BINDING
   PFAM; PF00501 AMP-binding

 Creation date 21-JUL-1991; UPDATE 22-JUN-1999

   1. SMITH, D.J., EARL, A.J. AND TURNER, G.
   The multifunctional peptide synthetase performing the first step of
   penicillin biosynthesis in Penicillin chrysogenum is a 421 073 dalton
   protein similar to Bacillus brevis peptide antibiotic synthetases.
   EMBO J. 9 2743-2750 (1990).

   2. SCHROEDER, J.
   Protein sequence homology between plant 4-coumarate:CoA ligase and 
   firefly luciferase.
   NUCLEIC ACIDS RES. 17 460-460 (1989).

   3. MALLONEE, D.H., WHITE, W.B. AND HYLEMON, P.B.
   Cloning and sequencing of a bile acid-inducible operon from 
   Eubacterium sp. strain VPI 12708.
   J.BACTERIOL. 172 7011-7019 (1990).

   4. FARRELL, D.H., MIKESELL, P., ACTIS, L.A. AND CROSA, J.H.
   A regulatory gene, angR, of the iron uptake system of Vibrio anguillarum:
   similarity with phage P22 cro and regulation by iron.
   GENE 86 45-51 (1990).

   A number of prokaryotic and eukaryotic enzymes, which appear to act via an
   ATP-dependent covalent binding of AMP to their substrate, share a region
   of sequence similarity [1-3] - this region is a Ser/Thr/Gly-rich domain 
   that is further characterised by a conserved Pro-Lys-Gly triplet. The 
   family of enzymes includes luciferase, long chain fatty acid Co-A ligase, 
   acetyl-CoA synthetase and various other closely related synthetases.
  
   AMPBINDING is a 2-element fingerprint that provides a signature for the
   STG-rich domain of AMP-binding proteins. The fingerprint was derived from
   an initial alignment of 7 sequences: the motifs span the STG-rich domain,
   motif 2 including the PKG triplet (cf. PROSITE pattern AMP_BINDING
   (PS00455)). Two iterations on OWL11.0 were required to reach convergence,
   at which point a true set comprising 13 sequences was identified, including
   the ORA octapeptide-repeat antigen, and angR, a Vibrio anguillarum protein
   believed to be a transcriptional activator [4]. On the basis of the
   presence of this AMP-binding domain, however, together with other
   indicators, it is thought that angR may be an enzyme involved in
   anguibactin biosynthesis (see PROSITE pattern AMP_BINDING).
  
   An update on SPTR37_9f identified a true set of 157 sequences.

  SUMMARY INFORMATION
    157 codes involving  2 elements

   COMPOSITE FINGERPRINT INDEX
  
    2| 157  157  
   --+-----------
     |   1    2  

True positives..
 O30409         Q44928         GRSB_BACBR     ACVS_EMENI     
 O30408         O68006         O68008         Q45675         
 SRF2_BACSU     PKSK_BACSU     O85740         O68007         
 O31827         P94460         Q45563         O69246         
 O66070         O30981         O31783         ACVS_CEPAC     
 O66069         Q45295         SRF1_BACSU     P94459         
 O30980         O85168         PPS2_BACSU     Q09164         
 Q18660         P73004         O87606         O52819         
 DHBF_BACSU     O52820         O30407         TYCA_BACBR     
 O52821         PPS1_BACSU     ANGR_VIBAN     O87704         
 HMP2_YEREN     O52803         O87314         O69826         
 ACVS_PENCH     ACVT_PENCH     Q50857         Q54959         
 O51162         GRSA_BACBR     O51539         O07944         
 Q52400         Q96337         O23268         LCFH_HAEIN     
 O69825         O86329         O68487         Q63151         
 LCF4_YEAST     O54154         Q00869         Q51338         
 P71076         P71077         ENTF_ECOLI     O85077         
 Q04414         Q52531         ACSA_EMENI     ACSA_PENCH     
 O85739         O67119         O13440         O68040         
 O68576         O27640         Q94598         O26319         
 ACSA_ECOLI     DLTA_LACCA     O67872         O29287         
 Q20121         LCF1_YEAST     Q55404         O33743         
 O33459         DLTA_BACSU     O07610         Q96338         
 O85019         O87313         O25686         O49063         
 Q50017         ACSA_NEUCR     Q24226         LCFD_HUMAN     
 LCFD_RAT       Q50858         O83181         P71717         
 O34837         MENE_BACSU     O53306         ACSA_ALCEU     
 HTS1_COCCA     ACS1_YEAST     Q27549         P94903         
 O34613         LCFH_MYCTU     Q10896         O30039         
 SID2_USTMA     Q21872         Q21873         LCFB_HUMAN     
 LCFA_HUMAN     Q96537         ACVS_NOCLA     O15840         
 O05295         O30147         O81614         Q96538         
 ACS1_KLULA     O07411         Q94597         PRPE_SALTY     
 PRPE_ECOLI     O60135         Q53661         LCFB_MOUSE     
 O05819         ACS2_YEAST     LCFB_RAT       O30479         
 Q18496         Q20264         O16775         O76858         
 O53406         Q54297         O69635         O29881         
 O54666         O54155         PKSJ_BACSU     YDID_ECOLI     
 O28762         O16481         LCFE_RAT       Q01135         
 CAIC_ECOLI     


  PROTEIN TITLES
   O30409           TYROCIDINE SYNTHETASE III [INCLUDES: ATP-DEPENDENT ASPARAGIN
   Q44928           GRAMICIDIN S SYNTHETASE 2 - BACILLUS BREVIS.
   GRSB_BACBR       GRAMICIDIN S SYNTHETASE II [INCLUDES: ATP-DEPENDENT PROLINE 
   ACVS_EMENI       DELTA-(L-ALPHA-AMINOADIPYL)-L-CYSTEINYL-D-VALINE SYNTHETASE 
   O30408           TYROCIDINE SYNTHETASE II [INCLUDES: ATP-DEPENDENT PROLINE AD
   O68006           BACITRACIN SYNTHETASE 1 (BA1) [INCLUDES: ATP-DEPENDENT ISOLE
   O68008           BACITRACIN SYNTHETASE 3 (BA3) [INCLUDES: ATP-DEPENDENT ISOLE
   Q45675           SURFACTIN SYNTHETASE - BACILLUS SUBTILIS.
   SRF2_BACSU       SURFACTIN SYNTHETASE SUBUNIT 2 - BACILLUS SUBTILIS.
   PKSK_BACSU       PUTATIVE POLYKETIDE SYNTHASE PKSK (PKS) - BACILLUS SUBTILIS.
   O85740           PYOCHELIN SYNTHETASE - PSEUDOMONAS AERUGINOSA.
   O68007           BACITRACIN SYNTHETASE 2 (BA2) [INCLUDES: ATP-DEPENDENT LYSIN
   O31827           PEPTIDE SYNTHETASE - BACILLUS SUBTILIS.
   P94460           PEPTIDE SYNTHETASE ORF5 - BACILLUS SUBTILIS.
   Q45563           FENGYCIN SYNTHETASE - BACILLUS SUBTILIS.
   O69246           LCHAB PROTEIN - BACILLUS LICHENIFORMIS.
   O66070           LICHENYSIN SYNTHETASE B - BACILLUS LICHENIFORMIS.
   O30981           FENGYCIN SYNTHETASE FENE - BACILLUS SUBTILIS.
   O31783           POLYKETIDE SYNTHASE OF TYPE I - BACILLUS SUBTILIS.
   ACVS_CEPAC       DELTA-(L-ALPHA-AMINOADIPYL)-L-CYSTEINYL-D-VALINE SYNTHETASE 
   O66069           LICHENYSIN SYNTHETASE A - BACILLUS LICHENIFORMIS.
   Q45295           FIRST SUBUNIT OF LICHENYSIN SYNTHETASE - BACILLUS LICHENIFOR
   SRF1_BACSU       SURFACTIN SYNTHETASE SUBUNIT 1 - BACILLUS SUBTILIS.
   P94459           PEPTIDE SYNTHETASE ORF4 - BACILLUS SUBTILIS.
   O30980           FENGYCIN SYNTHETASE FENA - BACILLUS SUBTILIS.
   O85168           SYRINGOMYCIN SYNTHETASE - PSEUDOMONAS SYRINGAE (PV. SYRINGAE
   PPS2_BACSU       PEPTIDE SYNTHETASE 2 - BACILLUS SUBTILIS.
   Q09164           CYCLOSPORIN SYNTHETASE (CYSYN) (EC 6.-.-.-) - TOLYPOCLADIUM 
   Q18660           SIMILAR TO LONG-CHAIN-FATTY-ACID COA LIGASE. NCBI GI: 104940
   P73004           LONG-CHAIN-FATTY-ACID COA LIGASE - SYNECHOCYSTIS SP. (STRAIN
   O87606           PEPTIDE SYNTHETASE - BACILLUS SUBTILIS.
   O52819           PCZA363.3 - AMYCOLATOPSIS ORIENTALIS.
   DHBF_BACSU       PROBABLE SERINE ACTIVATING ENZYME - BACILLUS SUBTILIS.
   O52820           PCZA363.4 - AMYCOLATOPSIS ORIENTALIS.
   O30407           TYROCIDINE SYNTHETASE I [INCLUDES: ATP-DEPENDENT D-PHENYLALA
   TYCA_BACBR       TYROCIDINE SYNTHETASE I [INCLUDES: ATP-DEPENDENT D-PHENYLALA
   O52821           PCZA363.5 - AMYCOLATOPSIS ORIENTALIS.
   PPS1_BACSU       PEPTIDE SYNTHETASE 1 - BACILLUS SUBTILIS.
   ANGR_VIBAN       ANGR PROTEIN - VIBRIO ANGUILLARUM.
   O87704           FENGYCIN SYNTHETASE - BACILLUS SUBTILIS.
   HMP2_YEREN       HIGH-MOLECULAR-WEIGHT PROTEIN 2 (HMWP2) - YERSINIA ENTEROCOL
   O52803           PCZA361.18 - AMYCOLATOPSIS ORIENTALIS.
   O87314           FXBC - MYCOBACTERIUM SMEGMATIS.
   O69826           PEPTIDE SYNTHASE - STREPTOMYCES COELICOLOR.
   ACVS_PENCH       DELTA-(L-ALPHA-AMINOADIPYL)-L-CYSTEINYL-D-VALINE SYNTHETASE 
   ACVT_PENCH       DELTA-(L-ALPHA-AMINOADIPYL)-L-CYSTEINYL-D-VALINE SYNTHETASE 
   Q50857           SAFRAMYCIN MX1 SYNTHETASE B - MYXOCOCCUS XANTHUS.
   Q54959           PRISTINAMYCIN I SYNTHASE I - STREPTOMYCES PRISTINAESPIRALIS.
   O51162           LONG-CHAIN-FATTY-ACID COA LIGASE - BORRELIA BURGDORFERI (LYM
   GRSA_BACBR       GRAMICIDIN S SYNTHETASE I [INCLUDES: ATP-DEPENDENT D-PHENYLA
   O51539           LONG-CHAIN-FATTY-ACID COA LIGASE - BORRELIA BURGDORFERI (LYM
   O07944           PRISTINAMYCIN I SYNTHASE 3 AND 4 - STREPTOMYCES PRISTINAESPI
   Q52400           SYRINGOMYCIN BIOSYNTHESIS ENZYME - PSEUDOMONAS SYRINGAE.
   Q96337           AMP-BINDING PROTEIN - BRASSICA NAPUS (RAPE).
   O23268           A6 ANTHER-SPECIFIC PROTEIN - ARABIDOPSIS THALIANA (MOUSE-EAR
   LCFH_HAEIN       PUTATIVE LONG-CHAIN-FATTY-ACID--COA LIGASE (EC 6.2.1.3) (LON
   O69825           PEPTIDE SYNTHASE - STREPTOMYCES COELICOLOR.
   O86329           MBTE - MYCOBACTERIUM TUBERCULOSIS.
   O68487           ACTINOMYCIN SYNTHETASE II - STREPTOMYCES CHRYSOMALLUS.
   Q63151           BRAIN ACYL-COA SYNTHTASE II - RATTUS NORVEGICUS (RAT).
   LCF4_YEAST       LONG-CHAIN-FATTY-ACID--COA LIGASE 4 (EC 6.2.1.3) (LONG-CHAIN
   O54154           PEPTIDE SYNTHASE - STREPTOMYCES COELICOLOR.
   Q00869           ENNIATIN SYTHETASE - FUSARIUM SCIRPI.
   Q51338           PYOVERDINE SYNTHETASE D - PSEUDOMONAS AERUGINOSA.
   P71076           YUKL PROTEIN - BACILLUS SUBTILIS.
   P71077           YUK[A,B,C,D,E,F], YUK[I,J,K,L,M] AND ALD GENES - BACILLUS SU
   ENTF_ECOLI       ENTEROBACTIN SYNTHETASE COMPONENT F (ENTEROCHELIN SYNTHASE F
   O85077           4-CHLOROBENZOATE COA LIGASE - ARTHROBACTER SP.
   Q04414           PUTATIVE BENZOATE--COA LIGASE (EC 6.2.1.25) (4-CBA-COA LIGAS
   Q52531           BIOSYNTHETIC PROTEIN C - PSEUDOMONAS SP.
   ACSA_EMENI       ACETYL-COENZYME A SYNTHETASE (EC 6.2.1.1) (ACETATE--COA LIGA
   ACSA_PENCH       ACETYL-COENZYME A SYNTHETASE (EC 6.2.1.1) (ACETATE--COA LIGA
   O85739           DIHYDROAERUGINOIC ACID SYNTHETASE - PSEUDOMONAS AERUGINOSA.
   O67119           LONG-CHAIN-FATTY-ACID COA LIGASE - AQUIFEX AEOLICUS.
   O13440           ACETATE--COA LIGASE (EC 6.2.1.1) - COPRINUS CINEREUS (INKY C
   O68040           ACETYL-COENZYME A SYNTHETASE (EC 6.2.1.1) - RHODOBACTER CAPS
   O68576           D-ALANINE-D-ALANYL CARRIER PROTEIN LIGASE - STREPTOCOCCUS MU
   O27640           ACETYL-COA SYNTHETASE - METHANOBACTERIUM THERMOAUTOTROPHICUM
   Q94598           LCFACAS4 - LEISHMANIA MAJOR.
   O26319           ACETYL-COA SYNTHETASE - METHANOBACTERIUM THERMOAUTOTROPHICUM
   ACSA_ECOLI       ACETYL-COENZYME A SYNTHETASE (EC 6.2.1.1) (ACETATE--COA LIGA
   DLTA_LACCA       D-ALANINE-ACTIVATING ENZYME (EC 6.3.2.-) (DAE) (D-ALANINE-D-
   O67872           ACETYL-COENZYME A SYNTHETASE - AQUIFEX AEOLICUS.
   O29287           ACETYL-COA SYNTHETASE (ACS-4) - ARCHAEOGLOBUS FULGIDUS.
   Q20121           COSMID F37C12 - CAENORHABDITIS ELEGANS.
   LCF1_YEAST       LONG-CHAIN-FATTY-ACID--COA LIGASE 1 (EC 6.2.1.3) (LONG-CHAIN
   Q55404           ACETYL-COENZYME A SYNTHETASE - SYNECHOCYSTIS SP. (STRAIN PCC
   O33743           STREPTOTHRICIN PEPTIDE SYNTHASE - STREPTOMYCES SP.
   O33459           ACETYL-COENZYME A SYNTHETASE - PSEUDOMONAS PUTIDA.
   DLTA_BACSU       D-ALANINE-ACTIVATING ENZYME (EC 6.3.2.-) (DAE) (D-ALANINE-D-
   O07610           HYPOTHETICAL 56.6 KD PROTEIN - BACILLUS SUBTILIS.
   Q96338           AMP-BINDING PROTEIN - BRASSICA NAPUS (RAPE).
   O85019           FXBB - MYCOBACTERIUM SMEGMATIS.
   O87313           FXBB - MYCOBACTERIUM SMEGMATIS.
   O25686           ACETYL-COA SYNTHETASE (ACOE) - HELICOBACTER PYLORI (CAMPYLOB
   O49063           ACETYL-COA SYNTHETASE (EC 6.2.1.1) (ACETATE--COA LIGASE) (AC
   Q50017           XCLC - MYCOBACTERIUM LEPRAE.
   ACSA_NEUCR       ACETYL-COENZYME A SYNTHETASE (EC 6.2.1.1) (ACETATE--COA LIGA
   Q24226           ACETYL-COENZYME A SYNTHETASE (EC 6.2.1.1) (ACETATE--COA LIGA
   LCFD_HUMAN       LONG-CHAIN-FATTY-ACID--COA LIGASE 4 (EC 6.2.1.3) (LONG-CHAIN
   LCFD_RAT         LONG-CHAIN-FATTY-ACID--COA LIGASE 4 (EC 6.2.1.3) (LONG-CHAIN
   Q50858           SAFRAMYCIN MX1 SYNTHETASE A - MYXOCOCCUS XANTHUS.
   O83181           LONG-CHAIN-FATTY-ACID--COA LIGASE - TREPONEMA PALLIDUM.
   P71717           HYPOTHETICAL 151.6 KD PROTEIN - MYCOBACTERIUM TUBERCULOSIS.
   O34837           OSB-COA SYNTHASE - BACILLUS SUBTILIS.
   MENE_BACSU       O-SUCCINYLBENZOIC ACID--COA LIGASE (EC 6.2.1.26) (OSB-COA SY
   O53306           PUTATUVE CHAIN -FATTY-ACID-COA LIGASE - MYCOBACTERIUM TUBERC
   ACSA_ALCEU       ACETYL-COENZYME A SYNTHETASE (EC 6.2.1.1) (ACETATE--COA LIGA
   HTS1_COCCA       HC-TOXIN SYNTHETASE (EC 6.3.2.-) (HTS) - COCHLIOBOLUS CARBON
   ACS1_YEAST       ACETYL-COENZYME A SYNTHETASE 1 (EC 6.2.1.1) (ACETATE--COA LI
   Q27549           ACETYL-COA SYNTHETASE (EC 6.2.1.1) (ACETATE--COA LIGASE) (AC
   P94903           ACETYL-COA SYNTHETASE - LYSOBACTER.
   O34613           YTCI - BACILLUS SUBTILIS.
   LCFH_MYCTU       PUTATIVE LONG-CHAIN-FATTY-ACID--COA LIGASE (EC 6.2.1.3) (LON
   Q10896           PROBABLE PEPTIDE SYNTHETASE CY251.20 - MYCOBACTERIUM TUBERCU
   O30039           LONG-CHAIN-FATTY-ACID--COA LIGASE (FADD-2) - ARCHAEOGLOBUS F
   SID2_USTMA       FERRICHROME SIDEROPHORE PEPTIDE SYNTHETASE (EC 6.-.-.-) - US
   Q21872           R09E10.3 PROTEIN - CAENORHABDITIS ELEGANS.
   Q21873           R09E10.4 PROTEIN - CAENORHABDITIS ELEGANS.
   LCFB_HUMAN       LONG-CHAIN-FATTY-ACID--COA LIGASE 2 (EC 6.2.1.3) (LONG-CHAIN
   LCFA_HUMAN       LONG-CHAIN-FATTY-ACID--COA LIGASE 1 (EC 6.2.1.3) (LONG-CHAIN
   Q96537           ACYL COA SYNTHETASE (EC 6.2.1.3) (LONG-CHAIN-FATTY-ACID--COA
   ACVS_NOCLA       DELTA-(L-ALPHA-AMINOADIPYL)-L-CYSTEINYL-D-VALINE SYNTHETASE 
   O15840           LCFACAS2 - LEISHMANIA MAJOR.
   O05295           HYPOTHETICAL 49.5 KD PROTEIN - MYCOBACTERIUM TUBERCULOSIS.
   O30147           LONG-CHAIN-FATTY-ACID--COA LIGASE (FADD-1) - ARCHAEOGLOBUS F
   O81614           F8M12.15 PROTEIN - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).
   Q96538           ACYL-COA SYNTHETASE (EC 6.2.1.3) (LONG-CHAIN-FATTY-ACID--COA
   ACS1_KLULA       ACETYL-COENZYME A SYNTHETASE 1 (EC 6.2.1.1) (ACETATE--COA LI
   O07411           PROBABLE FATTY-ACID COA LIGASE - MYCOBACTERIUM TUBERCULOSIS.
   Q94597           LCFACAS3 PROTEIN - LEISHMANIA MAJOR.
   PRPE_SALTY       PRPE PROTEIN - SALMONELLA TYPHIMURIUM.
   PRPE_ECOLI       PRPE PROTEIN - ESCHERICHIA COLI.
   O60135           FATTY ACID COA LIGASE - SCHIZOSACCHAROMYCES POMBE (FISSION Y
   Q53661           D-ALANINE-D-ALANYL CARRIER PROTEIN LIGASE - STAPHYLOCOCCUS A
   LCFB_MOUSE       LONG-CHAIN-FATTY-ACID--COA LIGASE 2 (EC 6.2.1.3) (LONG-CHAIN
   O05819           HYPOTHETICAL 156.7 KD PROTEIN - MYCOBACTERIUM TUBERCULOSIS.
   ACS2_YEAST       ACETYL-COENZYME A SYNTHETASE 2 (EC 6.2.1.1) (ACETATE--COA LI
   LCFB_RAT         LONG-CHAIN-FATTY-ACID--COA LIGASE, LIVER ISOZYME (EC 6.2.1.3
   O30479           PKS MODULE 1 - STREPTOMYCES HYGROSCOPICUS.
   Q18496           C36A4.9 PROTEIN - CAENORHABDITIS ELEGANS.
   Q20264           COSMID F41C3 - CAENORHABDITIS ELEGANS.
   O16775           R07C3.4 PROTEIN - CAENORHABDITIS ELEGANS.
   O76858           EBONY PROTEIN - DROSOPHILA MELANOGASTER (FRUIT FLY).
   O53406           FATTY ACID COA-LIGASE - MYCOBACTERIUM TUBERCULOSIS.
   Q54297           POLYKETIDE SYNTHASE - STREPTOMYCES HYGROSCOPICUS.
   O69635           ACETYL-COENZYMEA SYNTHETASE - MYCOBACTERIUM TUBERCULOSIS.
   O29881           ACETYL-COA SYNTHETASE (ACS-2) - ARCHAEOGLOBUS FULGIDUS.
   O54666           POLYKETIDE SYNTHASE - AMYCOLATOPSIS MEDITERRANEI.
   O54155           POLYKETIDE SYNTHASE - STREPTOMYCES COELICOLOR.
   PKSJ_BACSU       PUTATIVE POLYKETIDE BIOSYNTHESIS PROTEIN PKSJ - BACILLUS SUB
   YDID_ECOLI       HYPOTHETICAL 60.8 KD PROTEIN IN AROD-PPSA INTERGENIC REGION 
   O28762           LONG-CHAIN-FATTY-ACID--COA LIGASE (FADD-6) - ARCHAEOGLOBUS F
   O16481           C50H11.1 PROTEIN - CAENORHABDITIS ELEGANS.
   LCFE_RAT         LONG-CHAIN-FATTY-ACID--COA LIGASE 5 (EC 6.2.1.3) (LONG-CHAIN
   Q01135           PEPTIDE SYNTHETASE - METARHIZIUM ANISOPLIAE.
   CAIC_ECOLI       PROBABLE CROTONOBETAINE/CARNITINE-COA LIGASE (EC 6.3.2.-) - 

SCAN HISTORY OWL11_0 2 15 NSINGLE OWL17_1 1 35 NSINGLE OWL18_0 1 151 NSINGLE OWL19_1 1 200 NSINGLE OWL26_0 2 300 NSINGLE SPTR37_9f 2 300 NSINGLE INITIAL MOTIF SETS AMPBINDING1 Length of motif = 12 Motif number = 1 Luciferase AMP-binding domain motif I - 1 PCODE ST INT DDVVALPYSSGT 4CL_ORYSA 201 201 DDVVALPYSSGT 4CL1_PETCR 182 182 DDVVALPYSSGT 4CL2_PETCR 182 182 EDPLFLLYTSGS ACUA_ASPNI 274 274 EDPLFLLYTSGS ACUA_NEUCR 235 235 EQVALIMNSSGS LUCI_LUCCR 192 192 KTIALIMNSSGS LUCI_PHOPY 190 190 AMPBINDING2 Length of motif = 9 Motif number = 2 Luciferase AMP-binding domain motif II - 1 PCODE ST INT TGLPKGVML 4CL_ORYSA 213 0 TGLPKGVML 4CL1_PETCR 194 0 TGLPKGVML 4CL2_PETCR 194 0 TGKPKGVMH ACUA_ASPNI 286 0 TGKPKGVAH ACUA_NEUCR 247 0 TGLPKGVQL LUCI_LUCCR 204 0 TGLPKGVAL LUCI_PHOPY 202 0 FINAL MOTIF SETS AMPBINDING1 Length of motif = 12 Motif number = 1 Luciferase AMP-binding domain motif I - 2 PCODE ST INT SDLAYIIYTSGT O30409 2679 2679 TDLAYIIYTSGT Q44928 3728 3728 TDLAYIIYTSGT GRSB_BACBR 3729 3729 TDLAYIIYTSGT ACVS_EMENI 1558 1558 SDLAYIIYTSGT O30408 2684 2684 GDLAYVIYTSGS O68006 2266 2266 DSLAYIIYTSGS O68008 5685 5685 SDLAYIMYTSGS Q45675 606 606 SDLAYIMYTSGS SRF2_BACSU 606 606 ENLAYVIYTSGS PKSK_BACSU 703 703 DDLAYVIYTSGS O85740 652 652 GDLAYVIYTSGT O68007 1690 1690 DDLAYIMYTSGS O31827 616 616 DDLAYIMYTSGS P94460 608 608 DDLAYIMYTSGS Q45563 609 609 EDLAYYIYTSGS O69246 604 604 EDLAYYIYTSGS O66070 605 605 HSLAYIIYTSGS O30981 1644 1644 EHLAYIIYTSGS O31783 56 56 SDLAYIMYTSGT ACVS_CEPAC 1506 1506 GHLAYIIYTSGT O66069 597 597 GHLAYIIYTSGT Q45295 597 597 RNLAYIIYTSGT SRF1_BACSU 599 599 HHLAYIIYTSGT P94459 2673 2673 QHLAYIIYTSGT O30980 2570 2570 RNLAYVIYTSGS O85168 2711 2711 GDLAYLIYTSGT PPS2_BACSU 607 607 TDLAYVIFTSGS Q09164 633 633 DDLAFIMYTSGT Q18660 290 290 EDLATLIYTSGT P73004 238 238 EDSAYIIYTSGT O87606 1640 1640 GDLAYVMYTSGS O52819 147 147 DHPAYIIYTSGS DHBF_BACSU 604 604 EDAAYVIYTSGS O52820 3611 3611 TDLAYVIYTSGT O30407 170 170 TDLAYVIYTSGT TYCA_BACBR 170 170 GDLAYVMYTSGS O52821 608 608 GSLAYVIYTSGS PPS1_BACSU 598 598 SQPAYIIYTSGS ANGR_VIBAN 593 593 DQPAYVIYTSGT O87704 1640 1640 TQPAYIIYTSGS HMP2_YEREN 704 704 DHPAYVIYTSGS O52803 150 150 DQPAYVIYTSGS O87314 3239 3239 DDLAYVIFTSGS O69826 686 686 TDLAYIIYTSGT ACVS_PENCH 1532 1532 TDLAYIIYTSGT ACVT_PENCH 1564 1564 EQLAYVLYTSGS Q50857 1316 1316 AHPAYVIYTSGS Q54959 577 577 NDMATIIYTSGT O51162 176 176 TDLAYVIYTSGT GRSA_BACBR 182 182 KDIATIIYTSGT O51539 183 183 AHPAYVIYTSGS O07944 1648 1648 NSTAYIIYTSGS Q52400 162 162 DDTAAIMYTSGT Q96337 250 250 DDTAAIMYTSGT O23268 250 250 SDLFTIIYTSGT LCFH_HAEIN 185 185 DALAFIFYTSGS O69825 143 143 DNTAYLIYTSGT O86329 568 568 DHPAYVIYTSGS O68487 609 609 SDIAVIMYTSGS Q63151 279 279 EDPACIMYTSGS LCF4_YEAST 262 262 GDLAALLYTSGS O54154 167 167 TSLAYVVFTSGS Q00869 1700 1700 DNLAYVIYTSGS Q51338 644 644 LNTAYVIYTSGS P71076 166 166 LNTAYVIYTSGS P71077 166 166 HHTAYIIFTSGS ENTF_ECOLI 595 595 EDPAFVFYTSGT O85077 153 153 EDPAFVFYTSGT Q04414 153 153 DSLAYVIYTSGS Q52531 458 458 EDPLFLLYTSGS ACSA_EMENI 274 274 EDPLFLLYTSGS ACSA_PENCH 274 274 QASAYVIYTSGS O85739 689 689 DDVAVLPYTSGT O67119 133 133 EDPLFILYTSGS O13440 262 262 EDPLFILYTSGS O68040 261 261 DDTYYIIFTSGT O68576 148 148 EDPLFILYTSGT O27640 267 267 DDLALIMYTSGT Q94598 279 279 EDPLFILYTSGS O26319 258 258 EDPLFILYTSGS ACSA_ECOLI 256 256 DDNYYIIFTSGT DLTA_LACCA 144 144 EDPLFILYTSGT O67872 257 257 NDAALLLYTSGT O29287 257 257 SDIALIMYTSGT Q20121 274 274 DDLCCIMYTSGS LCF1_YEAST 262 262 EDMLFILYTSGS Q55404 261 261 EDPAYMLFTSGS O33743 124 124 NDPSYLLYTSGT O33459 249 249 HETFYIIYTSGS DLTA_BACSU 143 143 DDTAVILYTSGT O07610 168 168 DDVATLCYTSGT Q96338 257 257 AQLAYVIFTSGS O85019 166 166 AQLAYVIFTSGS O87313 166 166 EDPLFLLYTSGS O25686 262 262 EDPLFLLYTSGS O49063 302 302 DATAMVIYTSGT Q50017 132 132 EDPLFLLYTSGS ACSA_NEUCR 235 235 EDPLFMLYTSGS Q24226 188 188 SDMAIVMYTSGS LCFD_HUMAN 229 229 SDMAIVMYTSGS LCFD_RAT 229 229 DHLAYLIYTSGS Q50858 1740 1740 ADVATIIFTSGT O83181 206 206 TALAYVLFTSGS P71717 690 690 DATATLMYTSGT O34837 144 144 DATATLMYTSGT MENE_BACSU 135 135 DDNLFIMYTSGT O53306 156 156 EHPLFVLYTSGS ACSA_ALCEU 262 262 NQAAYILFTSGS HTS1_COCCA 4273 4273 EDPLFLLYTSGS ACS1_YEAST 312 312 EDPLFYLYTSGS Q27549 292 292 NEPSYLLYTSGT P94903 233 233 DDMAFLSYTSGT O34613 172 172 EDIVTLIYTSGT LCFH_MYCTU 131 131 VNLAYILYTSGT Q10896 1631 1631 DDLASIVYTSGT O30039 164 164 DDVAFIIYTSGS SID2_USTMA 1541 1541 ETLATISFTSGT Q21872 276 276 ETLATISFTSGT Q21873 272 272 EDLAVICFTSGT LCFB_HUMAN 268 268 EDLAVICFTSGT LCFA_HUMAN 268 268 TDICTIMYTSGT Q96537 223 223 TDLAYAIYTSGT ACVS_NOCLA 1490 1490 ESVALIMYTSGT O15840 264 264 GAIAMVVYTSGT O05295 129 129 EDVALIPYTGGT O30147 178 178 SDICTIMYTSGT O81614 249 249 SDICTIMYTSGT Q96538 224 224 EHPLFLLYTSGS ACS1_KLULA 289 289 DSPALIMYTSGT O07411 183 183 DDVSLIMYTSGT Q94597 272 272 NETSCILYTSGT PRPE_SALTY 232 232 NETSCILYTSGT PRPE_ECOLI 232 232 EEICCIMYTSGS O60135 239 239 NDTVYTIFTSGS Q53661 33 33 EDLAIICFTSGT LCFB_MOUSE 269 269 DQAAYVIFTSGT O05819 598 598 EDPLFLLYTSGS ACS2_YEAST 270 270 EDLAIICFTSGT LCFB_RAT 269 269 DDIAWMLYTSGT O30479 163 163 EDPLFILYTSGS Q18496 287 287 SDPASVCYTSGT Q20264 209 209 ETLATISFTSGT O16775 258 258 DHTAIVLYTSGS O76858 183 183 NSAAAMCYTSGT O53406 177 177 DEPAWMLYTSGT Q54297 162 162 EHPLFLLYTSGT O69635 255 255 EDFSFILYTSGT O29881 275 275 DEPAWMFYTSGT O54666 159 159 RSLAFLQYTSGS O54155 190 190 EDLALLLLTSGS PKSJ_BACSU 187 187 DELAAVLFTSGT YDID_ECOLI 188 188 DDLALIPYTAGT O28762 193 193 SNAATICFTSGT O16481 177 177 EDLSVICFTSGT LCFE_RAT 253 253 DSAAFVVFTSGS Q01135 2771 2771 DDTAEILFTSGT CAIC_ECOLI 178 178 AMPBINDING2 Length of motif = 9 Motif number = 2 Luciferase AMP-binding domain motif II - 2 PCODE ST INT TGKPKGVMV O30409 2691 0 TGKPKGVMI Q44928 3740 0 TGKPKGVMI GRSB_BACBR 3741 0 TGKPKGVMV ACVS_EMENI 1570 0 TGKPKGVML O30408 2696 0 TGKPKGVMI O68006 2278 0 TGKPKGVMI O68008 5697 0 TGKPKGVMI Q45675 618 0 TGKPKGVMI SRF2_BACSU 618 0 TGKPKGVMI PKSK_BACSU 715 0 TGTPKGVML O85740 664 0 TGNPKGVMV O68007 1702 0 TGRPKGVMI O31827 628 0 TGRPKGVMI P94460 620 0 TGRPKGVMI Q45563 621 0 TGRPKGVMV O69246 616 0 TGRPKGVMV O66070 617 0 TGKPKGVMI O30981 1656 0 TGEPKGVMV O31783 68 0 TGNPKGVMV ACVS_CEPAC 1518 0 TGRPKGVMI O66069 609 0 TGRPKGVMI Q45295 609 0 TGRPKGVMI SRF1_BACSU 611 0 TGRPKGVMV P94459 2685 0 TGQPKGVMV O30980 2582 0 TGNPKGVMI O85168 2723 0 TGRPKGVLV PPS2_BACSU 619 0 TGKPKGVMI Q09164 645 0 TGNPKGVMI Q18660 302 0 TGQPKGVML P73004 250 0 TGAPKGVIV O87606 1652 0 TGTPKGVAI O52819 159 0 TGRPKGVVV DHBF_BACSU 616 0 TGVPKGVLV O52820 3623 0 TGKPKGTML O30407 182 0 TGKPKGTML TYCA_BACBR 182 0 TGLPKGVAI O52821 620 0 TGQPKGVAV PPS1_BACSU 610 0 TGTPKGVVI ANGR_VIBAN 605 0 TGQPKGVVV O87704 1652 0 TGTPKGVVI HMP2_YEREN 716 0 TGQPKGVLV O52803 162 0 TGKPKGVVT O87314 3251 0 TGTPKGVAI O69826 698 0 TGRPKGVTV ACVS_PENCH 1544 0 TGRPKGVTV ACVT_PENCH 1576 0 TGQPKGVAI Q50857 1328 0 TGRPKGVVI Q54959 589 0 TGHPKGVML O51162 188 0 TGNPKGTML GRSA_BACBR 194 0 TGMPKGVML O51539 195 0 TGAPKGVVV O07944 1660 0 TGEPKGVQV Q52400 174 0 TGNPKGVML Q96337 262 0 TGNPKGVML O23268 262 0 TGEPKGVML LCFH_HAEIN 197 0 TGTPKGVML O69825 155 0 TGLPKGVAV O86329 580 0 TGVPKGVVN O68487 621 0 TGIPKGVMI Q63151 291 0 TGTPKGVVL LCF4_YEAST 274 0 TGTPKGVQI O54154 179 0 TGKPKGVMI Q00869 1712 0 TGKPKGTLL Q51338 656 0 TGVPKGVMI P71076 178 0 TGVPKGVMI P71077 178 0 TGRPKGVMV ENTF_ECOLI 607 0 TGLPKGVVI O85077 165 0 TGLPKGVVI Q04414 165 0 TGKPKGALL Q52531 470 0 TGKPKGVMH ACSA_EMENI 286 0 TGKPKGVMH ACSA_PENCH 286 0 TGVPKGVEV O85739 701 0 TGNPKGVML O67119 145 0 TGKPKGVVH O13440 274 0 TGKPKGVVH O68040 273 0 TGKPKGVQI O68576 160 0 TGKPKGVVH O27640 279 0 TGDPKGVMH Q94598 291 0 TGKPKGVLH O26319 270 0 TGKPKGVLH ACSA_ECOLI 268 0 TGKPKGVQI DLTA_LACCA 156 0 TGKPKGVLH O67872 269 0 TGKPKGVVL O29287 269 0 TGQPKGVIL Q20121 286 0 TGEPKGVVL LCF1_YEAST 274 0 TGKPKGVVH Q55404 273 0 TGEPKGVVV O33743 136 0 TGKPKGVQR O33459 261 0 TGNPKGVQI DLTA_BACSU 155 0 TGKPKGAML O07610 180 0 TGTPKGVVL Q96338 269 0 TGKPKGAMI O85019 178 0 TGKPKGAMI O87313 178 0 TGKPKGVQH O25686 274 0 TGKPKGVLH O49063 314 0 TGPPKGVLL Q50017 144 0 TGKPKGVAH ACSA_NEUCR 247 0 TGKPKGVLH Q24226 200 0 TGRPKGVMM LCFD_HUMAN 241 0 TGRPKGVMM LCFD_RAT 241 0 TGTPKAVML Q50858 1752 0 TGTPKGVVL O83181 218 0 TGEPKGVEV P71717 702 0 TGKPKGVQQ O34837 156 0 TGKPKGVQQ MENE_BACSU 147 0 TGHPKGVVH O53306 168 0 TGKPKGVQH ACSA_ALCEU 274 0 TGKPKGVVM HTS1_COCCA 4285 0 TGAPKGVQH ACS1_YEAST 324 0 TGTPKGVQH Q27549 304 0 TGKPKGVQR P94903 245 0 TGQPKGVVH O34613 184 0 TGNPKGVEM LCFH_MYCTU 143 0 TGEPKGVGI Q10896 1643 0 TGEPKGAML O30039 176 0 TGKPKGCLL SID2_USTMA 1553 0 TGRPKGVML Q21872 288 0 TGRPKGVML Q21873 284 0 TGNPKGAMV LCFB_HUMAN 280 0 TGNPKGAMV LCFA_HUMAN 280 0 TGEPKGVIL Q96537 235 0 TGKPKAVLV ACVS_NOCLA 1502 0 TGDPKGVMH O15840 276 0 TGPPKGVQL O05295 141 0 TGMPKGVML O30147 190 0 TGDPKGVMI O81614 261 0 TGDPKGVMI Q96538 236 0 TGAPKGVQH ACS1_KLULA 301 0 TGRPKGAVL O07411 195 0 TGGPKGVMH Q94597 284 0 TGKPKGVQR PRPE_SALTY 244 0 TGKPKGVQR PRPE_ECOLI 244 0 TGLPKGVIL O60135 251 0 TGEPKGVQI Q53661 45 0 TGNPKGAMI LCFB_MOUSE 281 0 TGTPKGVIG O05819 610 0 TGSPKGVVH ACS2_YEAST 282 0 TGNPKGAMV LCFB_RAT 281 0 TGRPKGVLS O30479 175 0 TGKPKGIQH Q18496 299 0 TGLPKGAIL Q20264 221 0 TGRPKGAML O16775 270 0 TGVPKGVRL O76858 195 0 TGNPKGVVY O53406 189 0 TGTPKGVLS Q54297 174 0 TGKPKGIMH O69635 267 0 TGRPKGAQH O29881 287 0 TGRPKGVVS O54666 171 0 TAAPKGVMV O54155 202 0 TGTPKAVML PKSJ_BACSU 199 0 EGLPKGVML YDID_ECOLI 200 0 TGLPKGCMH O28762 205 0 TGAPKGAVL O16481 189 0 TGDPKGAML LCFE_RAT 265 0 TGKPKGLVI Q01135 2783 0 TSRPKGVVI CAIC_ECOLI 190 0

User query: Display/Full Code "AMPBINDING"