RIBOSOMALS2: Ribosomal protein S2 signature
Seed alignment containing 15 sequences:

                       1         11        21        31        41        51        61        71        81        91        101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581 
                       |---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---
 RS2_ECOLI             ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATVSMRDMLKAGVHFGHQTRYWNPKM--KPFIFGARN-KVHIINLEKTVPMFNEALAELNKIASRKGK-ILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVR---QSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIV---DTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEAE  
RSP4_ARATH -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MATNGSASSAHVSQKEADVRMMCAAEVHLGTKNCNYQMER----YVFKRRNDGIYIFNLGKT--WEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTS-------------------------------------------------FSEPRLLILTDPRTDHQPIKEGALGNIPIIAFC---DTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAAGQKWDVMVDLFFYRELEETKPEDEDEAGPQAEYGALPAPEYGMVGGDQWTTAQIPDAAWPGEGQAPISAAPAAASWSDSAAAPADGGWEAAAPPSGAPAAGWE
NAB1_YEAST -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLPATFDLTPEDAQLLLAANTHLGARNVQVHQEP----YVFNARPDGVHVINVGKT--WEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRS-------------------------------------------------FKEPRLVIVTDPRSDAQAIKEASYVNIPVIAL---TDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYRDPEEVEQQVAEEATTEEAGEEEAKEEVTEEQAEATEWAEENADNVEW
RS2_GALSU ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTTSVVTLSELLAARVHLGHRFNKWNPKM--VSFIYAERN-KVHIIDLVQT-AFLLGEACDYVKLLAKKGKKFLFVGTRQELNTILAEEAERCNSFYINQRWLGGLLTNWVTIK------SRVQALEKKESEGFFNSLPKKESARLKKELDKLRRYFNGIRKMNTLPDVVIIIDQRKDLTAVQECNKLNIPTICIV---DTNCNPDIVDLPIPANDDAICSVKLILGKLVDFIKEGQIERELSKTS
RT02_MARPO -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MYNSNLLVIQKLLSTNAYLGHRIPTSDFQG----YLYGFRN-EMAIIDLEKTLICLRRTCNLIGSIISAKGH-LLLVNTNPEYNKIIQQMAKKTNQSYINHKWIGGFLTNWKHMK-------KVKKHFQDFSAHPNLKDAFTSSPFDYFPRFKKMQKCFEGIMTHNIPDCLVIINANQNSMAILEANQLQIPIVALVDSNIPNRLHKLITYPVPVNDDSIKFVYLFCNLITKTVILSKRSQRPKVKVKRL
RT04_YEAST ---------------MQRHVFARNFRRLSLLRNPSLTKRFQSSASGAANTPNNNDEVMLLQQKLLYDEIRSELKSLSQVPEDEILPELKKSLEQDKLSDKEQQLEAELSDFFRNYALLNKLFDSKTLDGQSSTTTAAATPTKPYPNLIPSANDKPYSSQELFLRQLNHSMRTAKLGATISKVYYPHKDIFYPPLPENITVESLMSAGVHLGQSTSLWRSST--QSYIYGEYK-GIHIIDLNQT-LSYLKRAAKVVEGVSESGGIILFLGTRQGQKRGLEEAAKKTHGYYVSTRWIPGTLTNSTEIS-----------------------GIWEKQEIDSNDNPTERALSPNETSKQVKPDLLVVLNPTENRNALLEAIKSRVPTIAII---DTDSEPSLVTYPIPGNDDSLRSVNFLLGVLARA--GQRGLQNRLARNNEK
LAMR_BOVIN -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQ----YIYKRKSDGIYIINLKRT--WEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGNFTNQIQAA-------------------------------------------------FREPRLLVVTDPRADHQPLTEASYVNLPTIAL---CNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEV-MPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTAAQPEVADWSEGVQVPSVPIQQFPTEDWSAQPSTEDWSAAPTAQATEWVGTTTEWS
SPU02369 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSRPYGQRAVLKFGAHTGATPVAGRYTPGTFTNQIQAA-------------------------------------------------FREPRILIVTDPRSDHQPVTEASYVNIPVIALC---NSDSPLRHVDIAIPCNNKSIHSIGLMWWMLSREVLRLRGAISRDVTWEIMVDLYFFRDPEEAEKEEQEARDRAVAVKEEPAQPYAEQWGSDPVAVPAGGQPVGVPDVTDWAADANKVAGAPAPPQQQWANDASKVAAPAAAPAAFPSEDWGSVDAPAAPVAPAAAAPAAAAPSQDWSTDDWGGAATNDWAVSS
A54012 MTSATDKSIDRLVVNAKTRRRNSSVGKIDLGDTVPGFAAMPESAASKNEAKKRMKALTGDSKKDSDLLWKVWFSYREMNYRHSWLTPFFILVCVYSAYFLSGNRTESNPLHMFVAISYQVDGTDSYAKGIKDLSFVFFYMIFFTFLREFLMDVVIRPFT--VYLNVTSEHRQKRIVEQMYAIFYCGVSGPFGLYIMYHSDLWLFKTKPMYRTYPVITNPFLCKIFYLGQAAFWAQQACVLVLQLEKPRKDYKELVFHHIVTLLLIWSSYVFHFTKMGLAIYITMDVSDFFLSLSKTLNYLNSTEIS-----------------------GIWEKQEIDSNDNPTERALSPNETSKQVKPDLLVVLNPTENRNALLEAIKSRVPTIAII---DTDSEPSLVTYPIPGNDDSLRSVNFLLGVLARAGQRGLQNRLARNNEK
RS2_PEA ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTKRYWNITFEEMMEAGVHFGHDTRKWNPRM--APFISAKRK-GIHITNLTKT-ARFLSEACDLAFDAASKGKQFLIVGTKKKAADSVTRAAIRARCHYVNKKWLRGMLTNWYTTE---TRLGKFRDLRTEQKTGKLNSLPKRDAAMLKRQLSHFETYLGGIKYMTGLPDIVIIVDQQKEYTALQECITLGIPTICLI---DTNCDPDLADMSIPANDDAIASIRLILNKLVFAICEGRSSSIRNY
LAMR_ARATH -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MATNGSASSAHVSQKEADVRMMCAAEVHLGTKNCNYQMER----YVFKRRNDGIYIFNLGKT--WEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTS-------------------------------------------------FSEPRLLILTDPRTDHQPIKEGALGNIPIIAF---CDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAAGQKWDVMV-DLFFYRELEETKPEDEDEAGPQAEYGALPAPEYGMVGGDQWTTAQIPDAAWPGEGQAPISAAPAAASWSDSAAAPADGGWEAAAPPSGAPAAGWE
RS2_ASTLO -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MFNDKIIKEMFFARLHLGHFSTKWNPKM--KKYVFCKQN-GKYIIDLIQT-VYYLKKVCNFIKKLSIEGKKILFVSARMLIVDKLKHFANVTKSFYITEDWLGGTFTNWITTKGCIDKLNYYKFNSSVDGLKLYDSLTKRERLISRKQQSKLAKYYFGIKQMKKIPDVVFLIGQSDLKKAIGECLKLNVPTISILFCLDTDCDPTMTNFFIPANDDSISSI-FFILDFVKYYMLKGGKKISKRLVFN
PWU0297034 ----------------------------------------------------------------------------------------------------------------------------------------------MNSTKIKEIEFQNVIVDPKINNLHLKTNTDISSNYYKAGTHIGHKSIHLSETHSWHPSMAQYHLGIRDNITICNVQQTQ--KCLSRAFYV-LTQILDNGGN----------VLIVNTNPEFYKLSINSMKFIEKNL-PFQTFSAISYCFYKWIGGTLTNYKQISKSIYCYVKFTQRCGKFCEKNNIDFTRYQKIKKCFQGYGSVSGDSIVMSLQKKPDVIFIFNPGDNKNLILEANRLQIPVIGCT---DMSSNTNGISYPIPCNNTSVEFTLYLYKKLYKVLHYISTKKK
RSP4_URECA -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSGSIDTLALKEEDVTKFLACASHLGANNVDFQMEQ----YVYKRRPDGTSIINVRKT--WEKVLLAARAIAAIENPADICVISARPYGQRAVLKFAHYTGATPIAGRFTPGTFTNQIQTA-------------------------------------------------FREPRLLVVTDPYTDHQPVTEASYVNIPVIALT---NTDSPLKYVDIAIPCNNKSIHSVGLMWWMLAREVLRLRGTISREVPWEVMVDLFFYRDPEEAEKEAQAEQAAAEKDKAPKEEFTADQAFTAPGTEVSDWASEVPVAPVPILAGGVDAATTEDWSVPAQSDWTAPAANPANAAAAGAPAPAPAAATTTESWGGSGAENWG
RS2_SPIOL ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTRRYWNINLEEMMEAGVHFGHGTRKWNPRM--SPYISAKCK-GIHIINLTRT-ARFLSEACDLVFDASSRGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTE---TRLHKFRDLRMEQTAGRLARLPKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLI---DTNCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP