| RIBOSOMALS2: | Ribosomal protein S2 signature |
| Seed alignment containing 15 sequences: |
1 11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521 531 541 551 561 571 581
|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---
RS2_ECOLI ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATVSMRDMLKAGVHFGHQTRYWNPKM--KPFIFGARN-KVHIINLEKTVPMFNEALAELNKIASRKGK-ILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVR---QSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIV---DTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEAE
RSP4_ARATH -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MATNGSASSAHVSQKEADVRMMCAAEVHLGTKNCNYQMER----YVFKRRNDGIYIFNLGKT--WEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTS-------------------------------------------------FSEPRLLILTDPRTDHQPIKEGALGNIPIIAFC---DTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAAGQKWDVMVDLFFYRELEETKPEDEDEAGPQAEYGALPAPEYGMVGGDQWTTAQIPDAAWPGEGQAPISAAPAAASWSDSAAAPADGGWEAAAPPSGAPAAGWE
NAB1_YEAST -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLPATFDLTPEDAQLLLAANTHLGARNVQVHQEP----YVFNARPDGVHVINVGKT--WEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRS-------------------------------------------------FKEPRLVIVTDPRSDAQAIKEASYVNIPVIAL---TDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYRDPEEVEQQVAEEATTEEAGEEEAKEEVTEEQAEATEWAEENADNVEW
RS2_GALSU ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTTSVVTLSELLAARVHLGHRFNKWNPKM--VSFIYAERN-KVHIIDLVQT-AFLLGEACDYVKLLAKKGKKFLFVGTRQELNTILAEEAERCNSFYINQRWLGGLLTNWVTIK------SRVQALEKKESEGFFNSLPKKESARLKKELDKLRRYFNGIRKMNTLPDVVIIIDQRKDLTAVQECNKLNIPTICIV---DTNCNPDIVDLPIPANDDAICSVKLILGKLVDFIKEGQIERELSKTS
RT02_MARPO -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MYNSNLLVIQKLLSTNAYLGHRIPTSDFQG----YLYGFRN-EMAIIDLEKTLICLRRTCNLIGSIISAKGH-LLLVNTNPEYNKIIQQMAKKTNQSYINHKWIGGFLTNWKHMK-------KVKKHFQDFSAHPNLKDAFTSSPFDYFPRFKKMQKCFEGIMTHNIPDCLVIINANQNSMAILEANQLQIPIVALVDSNIPNRLHKLITYPVPVNDDSIKFVYLFCNLITKTVILSKRSQRPKVKVKRL
RT04_YEAST ---------------MQRHVFARNFRRLSLLRNPSLTKRFQSSASGAANTPNNNDEVMLLQQKLLYDEIRSELKSLSQVPEDEILPELKKSLEQDKLSDKEQQLEAELSDFFRNYALLNKLFDSKTLDGQSSTTTAAATPTKPYPNLIPSANDKPYSSQELFLRQLNHSMRTAKLGATISKVYYPHKDIFYPPLPENITVESLMSAGVHLGQSTSLWRSST--QSYIYGEYK-GIHIIDLNQT-LSYLKRAAKVVEGVSESGGIILFLGTRQGQKRGLEEAAKKTHGYYVSTRWIPGTLTNSTEIS-----------------------GIWEKQEIDSNDNPTERALSPNETSKQVKPDLLVVLNPTENRNALLEAIKSRVPTIAII---DTDSEPSLVTYPIPGNDDSLRSVNFLLGVLARA--GQRGLQNRLARNNEK
LAMR_BOVIN -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQ----YIYKRKSDGIYIINLKRT--WEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGNFTNQIQAA-------------------------------------------------FREPRLLVVTDPRADHQPLTEASYVNLPTIAL---CNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEV-MPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTAAQPEVADWSEGVQVPSVPIQQFPTEDWSAQPSTEDWSAAPTAQATEWVGTTTEWS
SPU02369 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSRPYGQRAVLKFGAHTGATPVAGRYTPGTFTNQIQAA-------------------------------------------------FREPRILIVTDPRSDHQPVTEASYVNIPVIALC---NSDSPLRHVDIAIPCNNKSIHSIGLMWWMLSREVLRLRGAISRDVTWEIMVDLYFFRDPEEAEKEEQEARDRAVAVKEEPAQPYAEQWGSDPVAVPAGGQPVGVPDVTDWAADANKVAGAPAPPQQQWANDASKVAAPAAAPAAFPSEDWGSVDAPAAPVAPAAAAPAAAAPSQDWSTDDWGGAATNDWAVSS
A54012 MTSATDKSIDRLVVNAKTRRRNSSVGKIDLGDTVPGFAAMPESAASKNEAKKRMKALTGDSKKDSDLLWKVWFSYREMNYRHSWLTPFFILVCVYSAYFLSGNRTESNPLHMFVAISYQVDGTDSYAKGIKDLSFVFFYMIFFTFLREFLMDVVIRPFT--VYLNVTSEHRQKRIVEQMYAIFYCGVSGPFGLYIMYHSDLWLFKTKPMYRTYPVITNPFLCKIFYLGQAAFWAQQACVLVLQLEKPRKDYKELVFHHIVTLLLIWSSYVFHFTKMGLAIYITMDVSDFFLSLSKTLNYLNSTEIS-----------------------GIWEKQEIDSNDNPTERALSPNETSKQVKPDLLVVLNPTENRNALLEAIKSRVPTIAII---DTDSEPSLVTYPIPGNDDSLRSVNFLLGVLARAGQRGLQNRLARNNEK
RS2_PEA ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTKRYWNITFEEMMEAGVHFGHDTRKWNPRM--APFISAKRK-GIHITNLTKT-ARFLSEACDLAFDAASKGKQFLIVGTKKKAADSVTRAAIRARCHYVNKKWLRGMLTNWYTTE---TRLGKFRDLRTEQKTGKLNSLPKRDAAMLKRQLSHFETYLGGIKYMTGLPDIVIIVDQQKEYTALQECITLGIPTICLI---DTNCDPDLADMSIPANDDAIASIRLILNKLVFAICEGRSSSIRNY
LAMR_ARATH -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MATNGSASSAHVSQKEADVRMMCAAEVHLGTKNCNYQMER----YVFKRRNDGIYIFNLGKT--WEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTS-------------------------------------------------FSEPRLLILTDPRTDHQPIKEGALGNIPIIAF---CDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAAGQKWDVMV-DLFFYRELEETKPEDEDEAGPQAEYGALPAPEYGMVGGDQWTTAQIPDAAWPGEGQAPISAAPAAASWSDSAAAPADGGWEAAAPPSGAPAAGWE
RS2_ASTLO -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MFNDKIIKEMFFARLHLGHFSTKWNPKM--KKYVFCKQN-GKYIIDLIQT-VYYLKKVCNFIKKLSIEGKKILFVSARMLIVDKLKHFANVTKSFYITEDWLGGTFTNWITTKGCIDKLNYYKFNSSVDGLKLYDSLTKRERLISRKQQSKLAKYYFGIKQMKKIPDVVFLIGQSDLKKAIGECLKLNVPTISILFCLDTDCDPTMTNFFIPANDDSISSI-FFILDFVKYYMLKGGKKISKRLVFN
PWU0297034 ----------------------------------------------------------------------------------------------------------------------------------------------MNSTKIKEIEFQNVIVDPKINNLHLKTNTDISSNYYKAGTHIGHKSIHLSETHSWHPSMAQYHLGIRDNITICNVQQTQ--KCLSRAFYV-LTQILDNGGN----------VLIVNTNPEFYKLSINSMKFIEKNL-PFQTFSAISYCFYKWIGGTLTNYKQISKSIYCYVKFTQRCGKFCEKNNIDFTRYQKIKKCFQGYGSVSGDSIVMSLQKKPDVIFIFNPGDNKNLILEANRLQIPVIGCT---DMSSNTNGISYPIPCNNTSVEFTLYLYKKLYKVLHYISTKKK
RSP4_URECA -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSGSIDTLALKEEDVTKFLACASHLGANNVDFQMEQ----YVYKRRPDGTSIINVRKT--WEKVLLAARAIAAIENPADICVISARPYGQRAVLKFAHYTGATPIAGRFTPGTFTNQIQTA-------------------------------------------------FREPRLLVVTDPYTDHQPVTEASYVNIPVIALT---NTDSPLKYVDIAIPCNNKSIHSVGLMWWMLAREVLRLRGTISREVPWEVMVDLFFYRDPEEAEKEAQAEQAAAEKDKAPKEEFTADQAFTAPGTEVSDWASEVPVAPVPILAGGVDAATTEDWSVPAQSDWTAPAANPANAAAAGAPAPAPAAATTTESWGGSGAENWG
RS2_SPIOL ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTRRYWNINLEEMMEAGVHFGHGTRKWNPRM--SPYISAKCK-GIHIINLTRT-ARFLSEACDLVFDASSRGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTE---TRLHKFRDLRMEQTAGRLARLPKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLI---DTNCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP