FLGMOTORFLIM: Flagellar motor switch protein FliM signature
Seed alignment containing 5 sequences:

                       1         11        21        31        41        51        61        71        81        91        101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391    
                       |---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|------
 FLIM_CAUCR            MADELDDQAAMAQWASENPPGGGEGVNEFGDFSGGMGGWDDGGGDGASERILNQDEIDSLLGFDLSGDGSDDRTGIRAIINSA-----------LVSYERLPMLEIVFDRLVRLMTTSLRNFTSDNVEVSLDNISSIRFGDYLNSIPLPGILAVFRAEELDNYGLLTVDSNLIYSIVDVLLGGRRGTAAMRIEGRPYTTIERVLVQRMIDVVLHDLKSAFEPLHPVSFSLDRLETNPPFAAIA-RPANAAILVKLRIDMEDRGGRIELLLPYATLEPIRKMLLQQFMGEK--FGRDNIWEGHLATELWTTQMEVRAVLDEQQVPLSRVLNMQVGDTLMLNATSRQPGGAARRRIPLTRGRMGRRNHSIAVRAEAPVDRRKKAVQKLK  
FLIM_BACSU ----------------------------------------------MSGEVLSQNEIDALLS--AISTGEMDAEELKKEEKEKKVKVYDFKRALRFSKDQIRSLTRIHDNFARLLTTHFSAQLRTYIHISVSSVDQVPYEEFIRSIPNMTILNLFDVHPMEGRIMMEVNPTIAYTMMDRVMGGI-GISHNKVD--SLTEIETKIISNLFENALGNYKEAWQSIADIEPEMTEFEVNPQFVQMV-SPNETVVVISLNTQIGEISGVINLCIPHIVLEPLIPKLSVHYWMQSDRNEPKPEETKSLEKRIMTAQIPVVAELGTSELTIEEFLSLEVGDCITLDKSVTDPLTVLVGDKPKFLGQAGRVNRKQAVQILDHDIRGEQDGE
FLIM_SALTY ----------------------------------------------MGDSILSQAEIDALLN----GDSDTKDEPTPGIASDSDIRPYDPNTQRRVVRERLQALEIINERFARQFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNLNLIHLKPLRGTGLVVFSPSLVFIAVDNLFGGD-GRFPTKVEGREFTHTEQRVINRMLKLALEGYSDAWKAINPLEVEYVRSEMQVKFTNITTSPNDIVVNTPFHVEIGNLTGEFNICLPFSMIEPLRELLVNPPLENS--RHEDQNWRDNLVRQVQHSELELVANFADIPLRLSQILKLKPGDVLPIEKPDRIIAHVDGVPVLTSQYGTVNGQYALRVEHLINPILNSLNEEQPK
FLIM_ECOLI ----------------------------------------------MGDSILSQAEIDALLN----GDSEVKDEPTASVSGESDIRPYDPNTQRRVVRERLQALEIINERFARHFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNLNLIHLKPLRGTGLVVFSPSLVFIAVDNLFGGD-GRFPTKVEGREFTHTEQRVINRMLKLALEGYSDAWKAINPLEVEYVRSEMQVKFTNITTSPNDIVVNTPFHVEIGNLTGEFNICLPFSMIEPLRELLVNPPLENS--RNEDQNWRDNLVRQVQHSQLELVANFADISLRLSQILKLNPGDVLPIEKPDRIIAHVDGVPVLTSQYGTLNGQYALRIEHLINPILNSLNEEQPK
TPU282195 -----------------------------------------------MTEVLSQDEIDQLLT--AISSGDASIEDARPISDTRKITLYDFRRPDKFSKEQMRTLSLMHETFARLTTTSLSAQLRSMVHVHVASVDQLTYEEFIRSIPTPSTLAVITMDPLKGNAVLEVDPSITFSIIDRLFGGT-GQAAKVQR--DLTDIENSVMEGVIVRILANVRESWTQVIDLRPRLGQIETNPQFAQIV-PPSEMVVLVTLETKVGEEEGMMNFCIPYITIEPIISKLSSQFWFSSVRRSSTTQYMGVLRDKLSTVDMDVVAEVGSLRLSVRDILGLRVGDIIRLHDTHVGDPFVLSIGNRKKFLCQPGVVGKKIAAQILERIESTSQEDFEELSADEEELYE